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ProcessConcatenateFld.cpp
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1 ////////////////////////////////////////////////////////////////////////////////
2 //
3 // File: Concatenate field
4 //
5 // For more information, please see: http://www.nektar.info/
6 //
7 // The MIT License
8 //
9 // Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
10 // Department of Aeronautics, Imperial College London (UK), and Scientific
11 // Computing and Imaging Institute, University of Utah (USA).
12 //
13 // License for the specific language governing rights and limitations under
14 // Permission is hereby granted, free of charge, to any person obtaining a
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21 // The above copyright notice and this permission notice shall be included
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24 // THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
25 // OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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31 //
32 // Description: Concatenate parallel field
33 //
34 ////////////////////////////////////////////////////////////////////////////////
35 
36 #include <string>
37 #include <iostream>
38 using namespace std;
39 
40 #include "ProcessConcatenateFld.h"
41 
42 
45 
46 namespace Nektar
47 {
48 namespace Utilities
49 {
50 ModuleKey ProcessConcatenateFld::className =
52  ModuleKey(eProcessModule, "concatenate"),
53  ProcessConcatenateFld::create,
54  "Concatenate field file into single file");
55 
56 ProcessConcatenateFld::ProcessConcatenateFld(FieldSharedPtr f)
57  : ProcessModule(f)
58 {
59  // check for correct input files
60  if((f->m_inputfiles.count("xml") == 0) &&
61  (f->m_inputfiles.count("xml.gz") == 0))
62  {
63  cout << "An xml or xml.gz input file must be specified for the "
64  "concatenate module" << endl;
65  exit(3);
66  }
67 
68  if((f->m_inputfiles.count("fld") == 0) &&
69  (f->m_inputfiles.count("chk") == 0) &&
70  (f->m_inputfiles.count("rst") == 0))
71  {
72  cout << "A fld or chk or rst input file must be specified for the "
73  "concatenate module" << endl;
74 
75  exit(3);
76  }
77 
78 }
79 
81 {
82 }
83 
84 void ProcessConcatenateFld::Process(po::variables_map &vm)
85 {
86  if (m_f->m_verbose)
87  {
88  cout << "ProcessConcatenateFld: Concatenating field file" << endl;
89  }
90 
91  std::vector<LibUtilities::FieldDefinitionsSharedPtr> FieldDef
92  = m_f->m_exp[0]->GetFieldDefinitions();
93  std::vector<std::vector<NekDouble> > FieldData(FieldDef.size());
94 
95  // Copy Data into FieldData and set variable
96  for(int j = 0; j < m_f->m_exp.size(); ++j)
97  {
98  for(int i = 0; i < FieldDef.size(); ++i)
99  {
100  // Could do a search here to find correct variable
101  FieldDef[i]->m_fields.push_back(m_f->m_fielddef[0]->m_fields[j]);
102  m_f->m_exp[0]->AppendFieldData(FieldDef[i], FieldData[i],
103  m_f->m_exp[j]->UpdateCoeffs());
104  }
105  }
106 
107  m_f->m_fielddef = FieldDef;
108  m_f->m_data = FieldData;
109 }
110 }
111 }
112 
113