L2.cpp

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#include <cstdio>
#include <cstdlib>

#include <MultiRegions/ExpList.h>
#include <MultiRegions/ExpList1D.h>
#include <MultiRegions/ExpList2D.h>
#include <MultiRegions/ExpList3D.h>
#include <MultiRegions/ExpList2DHomogeneous1D.h>
#include <MultiRegions/ExpList3DHomogeneous1D.h>
#include <MultiRegions/ExpList3DHomogeneous2D.h>

using namespace std;
using namespace Nektar;

int main(int argc, char *argv[])
{
    int i,j;

    if(argc != 4)
    {
        fprintf(stderr,"Usage: L2 nfield meshfile fld \n");
        exit(1);
    }
    
    int nfield  = boost::lexical_cast<int>(argv[argc-3]);
    
    LibUtilities::SessionReaderSharedPtr vSession
            = LibUtilities::SessionReader::CreateInstance(argc-1, argv+1);


    //----------------------------------------------
    // Read in mesh from input file
    string meshfile(argv[argc-2]);
    SpatialDomains::MeshGraphSharedPtr graphShPt = SpatialDomains::MeshGraph::Read(vSession);//meshfile);
    //----------------------------------------------

    //----------------------------------------------
    // Import field file.
    string fieldfile(argv[argc-1]);
    vector<LibUtilities::FieldDefinitionsSharedPtr> fielddef;
    vector<vector<NekDouble> > fielddata;
    LibUtilities::Import(fieldfile,fielddef,fielddata);
    bool useFFT = false;
    bool dealiasing = false;
    //----------------------------------------------

    //----------------------------------------------
    // Define Expansion
    int expdim  = graphShPt->GetMeshDimension();
    int nfields = fielddef[0]->m_fields.size();
    Array<OneD, MultiRegions::ExpListSharedPtr> Exp(nfields);

    ASSERTL0((nfield >= 0)&&(nfield < nfields),"Value of nfield must be between zero and less than the number of fields in the file");
    
    switch(expdim)
    {
    case 1:
        {
            ASSERTL0(fielddef[0]->m_numHomogeneousDir <= 2,"Quasi-3D approach is only set up for 1 or 2 homogeneous directions");
            
            if(fielddef[0]->m_numHomogeneousDir == 1)
            {
                MultiRegions::ExpList2DHomogeneous1DSharedPtr Exp2DH1;

                // Define Homogeneous expansion
                int nplanes = fielddef[0]->m_numModes[1];
                
                // choose points to be at evenly spaced points at
                const LibUtilities::PointsKey Pkey(nplanes+1,LibUtilities::ePolyEvenlySpaced);
                const LibUtilities::BasisKey  Bkey(fielddef[0]->m_basis[1],nplanes,Pkey);
                NekDouble ly = fielddef[0]->m_homogeneousLengths[0];
                
                Exp2DH1 = MemoryManager<MultiRegions::ExpList2DHomogeneous1D>::AllocateSharedPtr(vSession,Bkey,ly,useFFT,dealiasing,graphShPt);
                Exp[0] = Exp2DH1;
                
                for(i = 1; i < nfields; ++i)
                {
                    Exp[i] = MemoryManager<MultiRegions::ExpList2DHomogeneous1D>::AllocateSharedPtr(*Exp2DH1);
                }
            }
            else if(fielddef[0]->m_numHomogeneousDir == 2)
            {
                MultiRegions::ExpList3DHomogeneous2DSharedPtr Exp3DH2;
        
                // Define Homogeneous expansion
                int nylines = fielddef[0]->m_numModes[1];
                int nzlines = fielddef[0]->m_numModes[2];
        
                // choose points to be at evenly spaced points at
                const LibUtilities::PointsKey PkeyY(nylines+1,LibUtilities::ePolyEvenlySpaced);
                const LibUtilities::BasisKey  BkeyY(fielddef[0]->m_basis[1],nylines,PkeyY);
                
                const LibUtilities::PointsKey PkeyZ(nzlines+1,LibUtilities::ePolyEvenlySpaced);
                const LibUtilities::BasisKey  BkeyZ(fielddef[0]->m_basis[2],nzlines,PkeyZ);
                
                NekDouble ly = fielddef[0]->m_homogeneousLengths[0];
                NekDouble lz = fielddef[0]->m_homogeneousLengths[1];
        
                Exp3DH2 = MemoryManager<MultiRegions::ExpList3DHomogeneous2D>::AllocateSharedPtr(vSession,BkeyY,BkeyZ,ly,lz,useFFT,dealiasing,graphShPt);
                Exp[0] = Exp3DH2;
        
                for(i = 1; i < nfields; ++i)
                {
                    Exp[i] = MemoryManager<MultiRegions::ExpList3DHomogeneous2D>::AllocateSharedPtr(*Exp3DH2);
                }
            }
            else
            {
                MultiRegions::ExpList1DSharedPtr Exp1D;
                Exp1D = MemoryManager<MultiRegions::ExpList1D>
                                                        ::AllocateSharedPtr(vSession,graphShPt);
                Exp[0] = Exp1D;
                for(i = 1; i < nfields; ++i)
                {
                    Exp[i] = MemoryManager<MultiRegions::ExpList1D>
                                                        ::AllocateSharedPtr(*Exp1D);
                }
            }
        }
        break;
    case 2:
        {
            ASSERTL0(fielddef[0]->m_numHomogeneousDir <= 1,"NumHomogeneousDir is only set up for 1");

            if(fielddef[0]->m_numHomogeneousDir == 1)
            {
                MultiRegions::ExpList3DHomogeneous1DSharedPtr Exp3DH1;

                // Define Homogeneous expansion
                int nplanes = fielddef[0]->m_numModes[2];

                // choose points to be at evenly spaced points at
                // nplanes + 1 points
                const LibUtilities::PointsKey Pkey(nplanes+1,LibUtilities::ePolyEvenlySpaced);
                const LibUtilities::BasisKey  Bkey(fielddef[0]->m_basis[2],nplanes,Pkey);
                NekDouble lz = fielddef[0]->m_homogeneousLengths[0];

                Exp3DH1 = MemoryManager<MultiRegions::ExpList3DHomogeneous1D>::AllocateSharedPtr(vSession,Bkey,lz,useFFT,dealiasing,graphShPt);
                Exp[0] = Exp3DH1;

                for(i = 1; i < nfields; ++i)
                {
                    Exp[i] = MemoryManager<MultiRegions::ExpList3DHomogeneous1D>::AllocateSharedPtr(*Exp3DH1);

                }
            }
            else
            {
                MultiRegions::ExpList2DSharedPtr Exp2D;
                Exp2D = MemoryManager<MultiRegions::ExpList2D>
                                                        ::AllocateSharedPtr(vSession,graphShPt);
                Exp[0] =  Exp2D;
                
                for(i = 1; i < nfields; ++i)
                {
                    Exp[i] = MemoryManager<MultiRegions::ExpList2D>
                        ::AllocateSharedPtr(*Exp2D);
                }
            }
        }
        break;
    case 3:
        {
            MultiRegions::ExpList3DSharedPtr Exp3D;
            Exp3D = MemoryManager<MultiRegions::ExpList3D>
                                                    ::AllocateSharedPtr(vSession,graphShPt);
            Exp[0] =  Exp3D;

            for(i = 1; i < nfields; ++i)
            {
                Exp[i] = MemoryManager<MultiRegions::ExpList3D>
                    ::AllocateSharedPtr(*Exp3D);
            }
        }
        break;
    default:
        ASSERTL0(false,"Expansion dimension not recognised");
        break;
    }
    //----------------------------------------------

    //----------------------------------------------
    // Copy data from field file
    for(j = 0; j < nfields; ++j)
    {
        for(int i = 0; i < fielddata.size(); ++i)
        {
            Exp[j]->ExtractDataToCoeffs(fielddef [i],
                                        fielddata[i],
                                        fielddef [i]->m_fields[j],
                                        Exp[j]->UpdateCoeffs());
        }
        Exp[j]->BwdTrans(Exp[j]->GetCoeffs(),Exp[j]->UpdatePhys());
    }
    //----------------------------------------------
    
    cout << "L2 of field "<< nfield << " is : " << Exp[nfield]->L2(Exp[nfield]->GetPhys()) << endl;
    return  0; 
}