ProcessHomogeneousStretch.cpp

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////////////////////////////////////////////////////////////////////////////////
//
//  File: ProcessHomogeneousStretch.cpp
//
//  For more information, please see: http://www.nektar.info/
//
//  The MIT License
//
//  Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
//  Department of Aeronautics, Imperial College London (UK), and Scientific
//  Computing and Imaging Institute, University of Utah (USA).
//
//  Permission is hereby granted, free of charge, to any person obtaining a
//  copy of this software and associated documentation files (the "Software"),
//  to deal in the Software without restriction, including without limitation
//  the rights to use, copy, modify, merge, publish, distribute, sublicense,
//  and/or sell copies of the Software, and to permit persons to whom the
//  Software is furnished to do so, subject to the following conditions:
//
//  The above copyright notice and this permission notice shall be included
//  in all copies or substantial portions of the Software.
//
//  THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
//  OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
//  FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
//  THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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//  DEALINGS IN THE SOFTWARE.
//
//  Description: Stretch homogeneous direction by an integer factor.
//
////////////////////////////////////////////////////////////////////////////////

#include <iostream>
#include <string>
using namespace std;

#include <boost/core/ignore_unused.hpp>

#include <LibUtilities/BasicUtils/SharedArray.hpp>

#include "ProcessHomogeneousStretch.h"

namespace Nektar
{
namespace FieldUtils
{

ModuleKey ProcessHomogeneousStretch::className =
    GetModuleFactory().RegisterCreatorFunction(
        ModuleKey(eProcessModule, "homstretch"),
        ProcessHomogeneousStretch::create,
        "Stretches homogeneous direction of a 3DH1D expansion, requires factor "
        "to be "
        "defined. The number of modes in the final expansion can be defined "
        "using"
        " --output-points-hom-z.");

ProcessHomogeneousStretch::ProcessHomogeneousStretch(FieldSharedPtr f)
    : ProcessModule(f)
{
    m_config["factor"] =
        ConfigOption(false, "NotSet", "integer stretch factor");
}

ProcessHomogeneousStretch::~ProcessHomogeneousStretch()
{
}

void ProcessHomogeneousStretch::Process(po::variables_map &vm)
{
    boost::ignore_unused(vm);

    // Skip in case of empty partition
    if (m_f->m_exp[0]->GetNumElmts() == 0)
    {
        return;
    }

    ASSERTL0(m_f->m_numHomogeneousDir == 1,
             "ProcessHomogeneousStretch only works for Homogeneous1D.");

    ASSERTL0(m_config["factor"].m_beenSet,
             "Missing parameter factor for ProcessHomogeneousStretch");

    int factor  = m_config["factor"].as<int>();
    int nfields = m_f->m_variables.size();
    int nplanes = m_f->m_exp[0]->GetHomogeneousBasis()->GetZ().num_elements();

    ASSERTL0(factor > 1, "Parameter factor must be an int greater than 1.");

    int nstrips;
    m_f->m_session->LoadParameter("Strip_Z", nstrips, 1);

    for (int s = 0; s < nstrips; ++s)
    {
        for (int i = 0; i < nfields; ++i)
        {
            int n       = s * nfields + i;
            int ncoeffs = m_f->m_exp[n]->GetPlane(0)->GetNcoeffs();
            // Loop planes backwards so we can copy in place
            for (int p = nplanes - 1; p > 1; --p)
            {
                int newP = 2 * factor * (p / 2) + p % 2;
                if (newP < nplanes)
                {
                    Vmath::Vcopy(
                        ncoeffs, m_f->m_exp[n]->GetPlane(p)->GetCoeffs(), 1,
                        m_f->m_exp[n]->GetPlane(newP)->UpdateCoeffs(), 1);
                }
                Vmath::Zero(ncoeffs, m_f->m_exp[n]->GetPlane(p)->UpdateCoeffs(),
                            1);
            }

            m_f->m_exp[n]->BwdTrans(m_f->m_exp[n]->GetCoeffs(),
                                    m_f->m_exp[n]->UpdatePhys());
            m_f->m_exp[n]->SetHomoLen(factor*m_f->m_exp[n]->GetHomoLen());
        }
    }
}
}
}