Nektar++
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Nektar::LocalRegions::Expansion1D Class Reference

#include <Expansion1D.h>

Inheritance diagram for Nektar::LocalRegions::Expansion1D:
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Public Member Functions

 Expansion1D (SpatialDomains::Geometry1DSharedPtr pGeom)
 
virtual ~Expansion1D ()
 
void AddNormTraceInt (const int dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void AddHDGHelmholtzTraceTerms (const NekDouble tau, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
SpatialDomains::Geometry1DSharedPtr GetGeom1D () const
 
- Public Member Functions inherited from Nektar::LocalRegions::Expansion
 Expansion (SpatialDomains::GeometrySharedPtr pGeom)
 
 Expansion (const Expansion &pSrc)
 
virtual ~Expansion ()
 
void SetTraceExp (const int traceid, ExpansionSharedPtr &f)
 
ExpansionSharedPtr GetTraceExp (const int traceid)
 
DNekScalMatSharedPtr GetLocMatrix (const LocalRegions::MatrixKey &mkey)
 
DNekScalMatSharedPtr GetLocMatrix (const StdRegions::MatrixType mtype, const StdRegions::ConstFactorMap &factors=StdRegions::NullConstFactorMap, const StdRegions::VarCoeffMap &varcoeffs=StdRegions::NullVarCoeffMap)
 
SpatialDomains::GeometrySharedPtr GetGeom () const
 
void Reset ()
 
IndexMapValuesSharedPtr CreateIndexMap (const IndexMapKey &ikey)
 
DNekScalBlkMatSharedPtr CreateStaticCondMatrix (const MatrixKey &mkey)
 
const SpatialDomains::GeomFactorsSharedPtrGetMetricInfo () const
 
DNekMatSharedPtr BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType)
 
DNekMatSharedPtr BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd)
 
void ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType)
 
void AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
void AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
void AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
void DGDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble >> &coeffs, Array< OneD, NekDouble > &outarray)
 
NekDouble VectorFlux (const Array< OneD, Array< OneD, NekDouble >> &vec)
 
void NormalTraceDerivFactors (Array< OneD, Array< OneD, NekDouble >> &factors, Array< OneD, Array< OneD, NekDouble >> &d0factors, Array< OneD, Array< OneD, NekDouble >> &d1factors)
 
IndexMapValuesSharedPtr GetIndexMap (const IndexMapKey &ikey)
 
void AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble >> &outarray)
 
ExpansionSharedPtr GetLeftAdjacentElementExp () const
 
ExpansionSharedPtr GetRightAdjacentElementExp () const
 
int GetLeftAdjacentElementTrace () const
 
int GetRightAdjacentElementTrace () const
 
void SetAdjacentElementExp (int traceid, ExpansionSharedPtr &e)
 
StdRegions::Orientation GetTraceOrient (int trace)
 
void SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Divided by the metric jacobi and quadrature weights. More...
 
void GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray)
 Extract the metric factors to compute the contravariant fluxes along edge edge and stores them into outarray following the local edge orientation (i.e. anticlockwise convention). More...
 
void GetTracePhysVals (const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient=StdRegions::eNoOrientation)
 
void GetTracePhysMap (const int edge, Array< OneD, int > &outarray)
 
void ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1)
 
const NormalVectorGetTraceNormal (const int id)
 
void ComputeTraceNormal (const int id)
 
const Array< OneD, const NekDouble > & GetPhysNormals (void)
 
void SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
void SetUpPhysNormals (const int trace)
 
void AddRobinMassMatrix (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
 
void TraceNormLen (const int traceid, NekDouble &h, NekDouble &p)
 
virtual void AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
 
const Array< OneD, const NekDouble > & GetElmtBndNormDirElmtLen (const int nbnd) const
 
void StdDerivBaseOnTraceMat (Array< OneD, DNekMatSharedPtr > &DerivMat)
 
- Public Member Functions inherited from Nektar::StdRegions::StdExpansion
 StdExpansion ()
 Default Constructor. More...
 
 StdExpansion (const int numcoeffs, const int numbases, const LibUtilities::BasisKey &Ba=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bb=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bc=LibUtilities::NullBasisKey)
 Constructor. More...
 
 StdExpansion (const StdExpansion &T)
 Copy Constructor. More...
 
virtual ~StdExpansion ()
 Destructor. More...
 
int GetNumBases () const
 This function returns the number of 1D bases used in the expansion. More...
 
const Array< OneD, const LibUtilities::BasisSharedPtr > & GetBase () const
 This function gets the shared point to basis. More...
 
const LibUtilities::BasisSharedPtrGetBasis (int dir) const
 This function gets the shared point to basis in the dir direction. More...
 
int GetNcoeffs (void) const
 This function returns the total number of coefficients used in the expansion. More...
 
int GetTotPoints () const
 This function returns the total number of quadrature points used in the element. More...
 
LibUtilities::BasisType GetBasisType (const int dir) const
 This function returns the type of basis used in the dir direction. More...
 
int GetBasisNumModes (const int dir) const
 This function returns the number of expansion modes in the dir direction. More...
 
int EvalBasisNumModesMax (void) const
 This function returns the maximum number of expansion modes over all local directions. More...
 
LibUtilities::PointsType GetPointsType (const int dir) const
 This function returns the type of quadrature points used in the dir direction. More...
 
int GetNumPoints (const int dir) const
 This function returns the number of quadrature points in the dir direction. More...
 
const Array< OneD, const NekDouble > & GetPoints (const int dir) const
 This function returns a pointer to the array containing the quadrature points in dir direction. More...
 
int GetNverts () const
 This function returns the number of vertices of the expansion domain. More...
 
int GetTraceNcoeffs (const int i) const
 This function returns the number of expansion coefficients belonging to the i-th trace. More...
 
int GetTraceIntNcoeffs (const int i) const
 
int GetTraceNumPoints (const int i) const
 This function returns the number of quadrature points belonging to the i-th trace. More...
 
const LibUtilities::BasisKey GetTraceBasisKey (const int i, int k=-1) const
 This function returns the basis key belonging to the i-th trace. More...
 
LibUtilities::PointsKey GetTracePointsKey (const int i, int k=-1) const
 This function returns the basis key belonging to the i-th trace. More...
 
int NumBndryCoeffs (void) const
 
int NumDGBndryCoeffs (void) const
 
const LibUtilities::PointsKey GetNodalPointsKey () const
 This function returns the type of expansion Nodal point type if defined. More...
 
int GetNtraces () const
 Returns the number of trace elements connected to this element. More...
 
LibUtilities::ShapeType DetShapeType () const
 This function returns the shape of the expansion domain. More...
 
std::shared_ptr< StdExpansionGetStdExp (void) const
 
std::shared_ptr< StdExpansionGetLinStdExp (void) const
 
int GetShapeDimension () const
 
bool IsBoundaryInteriorExpansion ()
 
bool IsNodalNonTensorialExp ()
 
void BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Backward transformation from coefficient space to physical space. More...
 
void FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Forward transformation from physical space to coefficient space. More...
 
void FwdTransBndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
NekDouble Integral (const Array< OneD, const NekDouble > &inarray)
 This function integrates the specified function over the domain. More...
 
void FillMode (const int mode, Array< OneD, NekDouble > &outarray)
 This function fills the array outarray with the mode-th mode of the expansion. More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 this function calculates the inner product of a given function f with the different modes of the expansion More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &base, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int coll_check)
 
void IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
int GetElmtId ()
 Get the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void SetElmtId (const int id)
 Set the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2=NullNekDouble1DArray, Array< OneD, NekDouble > &coords_3=NullNekDouble1DArray)
 this function returns the physical coordinates of the quadrature points of the expansion More...
 
void GetCoord (const Array< OneD, const NekDouble > &Lcoord, Array< OneD, NekDouble > &coord)
 given the coordinates of a point of the element in the local collapsed coordinate system, this function calculates the physical coordinates of the point More...
 
DNekMatSharedPtr GetStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr GetStdStaticCondMatrix (const StdMatrixKey &mkey)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble >> &Fvec, Array< OneD, NekDouble > &outarray)
 
DNekScalBlkMatSharedPtr GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
void DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
int CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
NekDouble StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 
int GetCoordim ()
 
void GetBoundaryMap (Array< OneD, unsigned int > &outarray)
 
void GetInteriorMap (Array< OneD, unsigned int > &outarray)
 
int GetVertexMap (const int localVertexId, bool useCoeffPacking=false)
 
void GetTraceToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1)
 
void GetTraceCoeffMap (const unsigned int traceid, Array< OneD, unsigned int > &maparray)
 
void GetElmtTraceToTraceMap (const unsigned int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1)
 
void GetTraceInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, const Orientation traceOrient=eForwards)
 
void GetTraceNumModes (const int tid, int &numModes0, int &numModes1, const Orientation traceOrient=eDir1FwdDir1_Dir2FwdDir2)
 
void MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
DNekMatSharedPtr CreateGeneralMatrix (const StdMatrixKey &mkey)
 this function generates the mass matrix \(\mathbf{M}[i][j] = \int \phi_i(\mathbf{x}) \phi_j(\mathbf{x}) d\mathbf{x}\) More...
 
void GeneralMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void ReduceOrderCoeffs (int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void SVVLaplacianFilter (Array< OneD, NekDouble > &array, const StdMatrixKey &mkey)
 
void ExponentialFilter (Array< OneD, NekDouble > &array, const NekDouble alpha, const NekDouble exponent, const NekDouble cutoff)
 
void LaplacianMatrixOp (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
DNekMatSharedPtr GenMatrix (const StdMatrixKey &mkey)
 
void PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void PhysDeriv_s (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_ds)
 
void PhysDeriv_n (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_dn)
 
void PhysDirectionalDeriv (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &outarray)
 
void StdPhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void StdPhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
NekDouble PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluate (const Array< OneD, DNekMatSharedPtr > &I, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluateBasis (const Array< OneD, const NekDouble > &coords, int mode)
 This function evaluates the basis function mode mode at a point coords of the domain. More...
 
void LocCoordToLocCollapsed (const Array< OneD, const NekDouble > &xi, Array< OneD, NekDouble > &eta)
 Convert local cartesian coordinate xi into local collapsed coordinates eta. More...
 
void LocCollapsedToLocCoord (const Array< OneD, const NekDouble > &eta, Array< OneD, NekDouble > &xi)
 Convert local collapsed coordinates eta into local cartesian coordinate xi. More...
 
virtual int v_CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble >> &Fvec, Array< OneD, NekDouble > &outarray)
 
virtual DNekScalBlkMatSharedPtr v_GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual void v_DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
NekDouble Linf (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_\infty\) error \( |\epsilon|_\infty = \max |u - u_{exact}|\) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble L2 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_2\) error, \( | \epsilon |_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble H1 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( H^1\) error, \( | \epsilon |^1_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 + \nabla(u - u_{exact})\cdot\nabla(u - u_{exact})\cdot dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
const LibUtilities::PointsKeyVector GetPointsKeys () const
 
DNekMatSharedPtr BuildInverseTransformationMatrix (const DNekScalMatSharedPtr &m_transformationmatrix)
 
void PhysInterpToSimplexEquiSpaced (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int npset=-1)
 This function performs an interpolation from the physical space points provided at input into an array of equispaced points which are not the collapsed coordinate. So for a tetrahedron you will only get a tetrahedral number of values. More...
 
void GetSimplexEquiSpacedConnectivity (Array< OneD, int > &conn, bool standard=true)
 This function provides the connectivity of local simplices (triangles or tets) to connect the equispaced data points provided by PhysInterpToSimplexEquiSpaced. More...
 
void EquiSpacedToCoeffs (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs a projection/interpolation from the equispaced points sometimes used in post-processing onto the coefficient space. More...
 
template<class T >
std::shared_ptr< T > as ()
 
void IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true)
 
void GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat)
 
- Public Member Functions inherited from Nektar::StdRegions::StdExpansion1D
 StdExpansion1D ()
 
 StdExpansion1D (int numcoeffs, const LibUtilities::BasisKey &Ba)
 
 StdExpansion1D (const StdExpansion1D &T)
 
virtual ~StdExpansion1D ()
 
void PhysTensorDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Evaluate the derivative \( d/d{\xi_1} \) at the physical quadrature points given by inarray and return in outarray. More...
 

Protected Member Functions

virtual DNekMatSharedPtr v_GenMatrix (const StdRegions::StdMatrixKey &mkey)
 
virtual void v_AddRobinMassMatrix (const int vert, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
 
virtual void v_AddRobinEdgeContribution (const int vert, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
 
virtual NekDouble v_VectorFlux (const Array< OneD, Array< OneD, NekDouble >> &vec)
 
virtual void v_NormalTraceDerivFactors (Array< OneD, Array< OneD, NekDouble >> &factors, Array< OneD, Array< OneD, NekDouble >> &d0factors, Array< OneD, Array< OneD, NekDouble >> &d1factors)
 : This method gets all of the factors which are required as part of the Gradient Jump Penalty stabilisation and involves the product of the normal and geometric factors along the element trace. More...
 
virtual const NormalVectorv_GetTraceNormal (const int edge) const final
 
virtual void v_ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1)
 
virtual void v_TraceNormLen (const int traceid, NekDouble &h, NekDouble &p)
 
- Protected Member Functions inherited from Nektar::LocalRegions::Expansion
void ComputeLaplacianMetric ()
 
void ComputeQuadratureMetric ()
 
void ComputeGmatcdotMF (const Array< TwoD, const NekDouble > &df, const Array< OneD, const NekDouble > &direction, Array< OneD, Array< OneD, NekDouble >> &dfdir)
 
virtual void v_MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_ComputeLaplacianMetric ()
 
virtual void v_GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2, Array< OneD, NekDouble > &coords_3)
 
Array< OneD, NekDoublev_GetMF (const int dir, const int shapedim, const StdRegions::VarCoeffMap &varcoeffs)
 
Array< OneD, NekDoublev_GetMFDiv (const int dir, const StdRegions::VarCoeffMap &varcoeffs)
 
Array< OneD, NekDoublev_GetMFMag (const int dir, const StdRegions::VarCoeffMap &varcoeffs)
 
virtual DNekScalMatSharedPtr v_GetLocMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual DNekMatSharedPtr v_BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType)
 
virtual DNekMatSharedPtr v_BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd)
 
virtual void v_ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType)
 
virtual void v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
virtual void v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
virtual void v_AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
virtual void v_DGDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble >> &coeffs, Array< OneD, NekDouble > &outarray)
 
virtual void v_AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble >> &outarray)
 
virtual StdRegions::Orientation v_GetTraceOrient (int trace)
 
virtual void v_SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray)
 
virtual void v_GetTracePhysVals (const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient)
 
virtual void v_GetTracePhysMap (const int edge, Array< OneD, int > &outarray)
 
virtual void v_ComputeTraceNormal (const int id)
 
virtual const Array< OneD, const NekDouble > & v_GetPhysNormals (void)
 
virtual void v_SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
virtual void v_SetUpPhysNormals (const int id)
 
virtual void v_AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
 
virtual void v_GenTraceExp (const int traceid, ExpansionSharedPtr &exp)
 
- Protected Member Functions inherited from Nektar::StdRegions::StdExpansion
DNekMatSharedPtr CreateStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr CreateStdStaticCondMatrix (const StdMatrixKey &mkey)
 Create the static condensation of a matrix when using a boundary interior decomposition. More...
 
void BwdTrans_MatOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase_SumFac (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GeneralMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree_Kernel (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp)
 
void LaplacianMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp_MatFree (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void HelmholtzMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
virtual void v_SetCoeffsToOrientation (Array< OneD, NekDouble > &coeffs, StdRegions::Orientation dir)
 
virtual NekDouble v_StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 
virtual void v_GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat)
 
virtual void v_MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
template<int DIR>
NekDouble BaryEvaluate (const NekDouble &coord, const NekDouble *physvals)
 This function performs the barycentric interpolation of the polynomial stored in coord at a point physvals using barycentric interpolation weights in direction. More...
 
template<int DIR>
NekDouble BaryEvaluateBasis (const NekDouble &coord, const int &mode)
 
- Protected Member Functions inherited from Nektar::StdRegions::StdExpansion1D
virtual NekDouble v_PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals) override
 

Additional Inherited Members

- Protected Attributes inherited from Nektar::LocalRegions::Expansion
LibUtilities::NekManager< IndexMapKey, IndexMapValues, IndexMapKey::opLessm_indexMapManager
 
std::map< int, ExpansionWeakPtrm_traceExp
 
SpatialDomains::GeometrySharedPtr m_geom
 
SpatialDomains::GeomFactorsSharedPtr m_metricinfo
 
MetricMap m_metrics
 
std::map< int, NormalVectorm_traceNormals
 
ExpansionWeakPtr m_elementLeft
 
ExpansionWeakPtr m_elementRight
 
int m_elementTraceLeft = -1
 
int m_elementTraceRight = -1
 
std::map< int, Array< OneD, NekDouble > > m_elmtBndNormDirElmtLen
 the element length in each element boundary(Vertex, edge or face) normal direction calculated based on the local m_metricinfo times the standard element length (which is 2.0) More...
 
- Protected Attributes inherited from Nektar::StdRegions::StdExpansion
Array< OneD, LibUtilities::BasisSharedPtrm_base
 
int m_elmt_id
 
int m_ncoeffs
 
LibUtilities::NekManager< StdMatrixKey, DNekMat, StdMatrixKey::opLessm_stdMatrixManager
 
LibUtilities::NekManager< StdMatrixKey, DNekBlkMat, StdMatrixKey::opLessm_stdStaticCondMatrixManager
 

Detailed Description

Definition at line 56 of file Expansion1D.h.

Constructor & Destructor Documentation

◆ Expansion1D()

Nektar::LocalRegions::Expansion1D::Expansion1D ( SpatialDomains::Geometry1DSharedPtr  pGeom)
inline

Definition at line 60 of file Expansion1D.h.

61  : Expansion(pGeom), StdExpansion1D()
62  {
63  }
Expansion(SpatialDomains::GeometrySharedPtr pGeom)
Definition: Expansion.cpp:47

◆ ~Expansion1D()

virtual Nektar::LocalRegions::Expansion1D::~Expansion1D ( )
inlinevirtual

Definition at line 65 of file Expansion1D.h.

66  {
67  }

Member Function Documentation

◆ AddHDGHelmholtzTraceTerms()

void Nektar::LocalRegions::Expansion1D::AddHDGHelmholtzTraceTerms ( const NekDouble  tau,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 322 of file Expansion1D.cpp.

325 {
326  int i, n;
327  int nbndry = NumBndryCoeffs();
328  int nquad = GetNumPoints(0);
329  int ncoeffs = GetNcoeffs();
330  int coordim = GetCoordim();
331  Array<OneD, unsigned int> vmap;
332 
333  ASSERTL0(&inarray[0] != &outarray[0],
334  "Input and output arrays use the same memory");
335 
336  const Array<OneD, const NekDouble> &Basis = GetBasis(0)->GetBdata();
338 
339  GetBoundaryMap(vmap);
340 
341  // Add F = \tau <phi_i,phi_j> (note phi_i is zero if phi_j is non-zero)
342  for (i = 0; i < nbndry; ++i)
343  {
344  outarray[vmap[i]] += tau * Basis[(vmap[i] + 1) * nquad - 1] *
345  Basis[(vmap[i] + 1) * nquad - 1] *
346  inarray[vmap[i]];
347  outarray[vmap[i]] += tau * Basis[vmap[i] * nquad] *
348  Basis[vmap[i] * nquad] * inarray[vmap[i]];
349  }
350 
351  //===============================================================
352  // Add -\sum_i D_i^T M^{-1} G_i + E_i M^{-1} G_i =
353  // \sum_i D_i M^{-1} G_i term
354 
358  Array<OneD, NekDouble> tmpcoeff(ncoeffs, 0.0);
359  DNekVec Coeffs(ncoeffs, outarray, eWrapper);
360  DNekVec Tmpcoeff(ncoeffs, tmpcoeff, eWrapper);
361 
362  for (n = 0; n < coordim; ++n)
363  {
364  // evaluate M^{-1} G
365  for (i = 0; i < ncoeffs; ++i)
366  {
367  // lower boundary (negative normal)
368  tmpcoeff[i] -= invMass(i, vmap[0]) * Basis[vmap[0] * nquad] *
369  Basis[vmap[0] * nquad] * inarray[vmap[0]];
370 
371  // upper boundary (positive normal)
372  tmpcoeff[i] += invMass(i, vmap[1]) *
373  Basis[(vmap[1] + 1) * nquad - 1] *
374  Basis[(vmap[1] + 1) * nquad - 1] * inarray[vmap[1]];
375  }
376 
377  DNekScalMat &Dmat = *GetLocMatrix(DerivType[n]);
378  Coeffs = Coeffs + Dmat * Tmpcoeff;
379  }
380 }
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:215
DNekScalMatSharedPtr GetLocMatrix(const LocalRegions::MatrixKey &mkey)
Definition: Expansion.cpp:88
void GetBoundaryMap(Array< OneD, unsigned int > &outarray)
Definition: StdExpansion.h:677
int GetNcoeffs(void) const
This function returns the total number of coefficients used in the expansion.
Definition: StdExpansion.h:130
const LibUtilities::BasisSharedPtr & GetBasis(int dir) const
This function gets the shared point to basis in the dir direction.
Definition: StdExpansion.h:118
int GetNumPoints(const int dir) const
This function returns the number of quadrature points in the dir direction.
Definition: StdExpansion.h:226
NekMatrix< NekMatrix< NekDouble, StandardMatrixTag >, ScaledMatrixTag > DNekScalMat
NekVector< NekDouble > DNekVec
Definition: NekTypeDefs.hpp:48

References ASSERTL0, Nektar::StdRegions::eInvMass, Nektar::StdRegions::eWeakDeriv0, Nektar::StdRegions::eWeakDeriv1, Nektar::StdRegions::eWeakDeriv2, Nektar::eWrapper, and Nektar::LibUtilities::Basis::GetBdata().

◆ AddNormTraceInt()

void Nektar::LocalRegions::Expansion1D::AddNormTraceInt ( const int  dir,
Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 297 of file Expansion1D.cpp.

300 {
301  boost::ignore_unused(dir);
302 
303  int k;
304  int nbndry = NumBndryCoeffs();
305  int nquad = GetNumPoints(0);
306  const Array<OneD, const NekDouble> &Basis = GetBasis(0)->GetBdata();
307  Array<OneD, unsigned int> vmap;
308 
309  GetBoundaryMap(vmap);
310 
311  // add G \lambda term (can assume G is diagonal since one
312  // of the basis is zero at boundary otherwise)
313  for (k = 0; k < nbndry; ++k)
314  {
315  outarray[vmap[k]] += (Basis[(vmap[k] + 1) * nquad - 1] *
316  Basis[(vmap[k] + 1) * nquad - 1] -
317  Basis[vmap[k] * nquad] * Basis[vmap[k] * nquad]) *
318  inarray[vmap[k]];
319  }
320 }

References Nektar::LibUtilities::Basis::GetBdata().

◆ GetGeom1D()

SpatialDomains::Geometry1DSharedPtr Nektar::LocalRegions::Expansion1D::GetGeom1D ( ) const
inline

Definition at line 109 of file Expansion1D.h.

110 {
111  return std::dynamic_pointer_cast<SpatialDomains ::Geometry1D>(m_geom);
112 }
SpatialDomains::GeometrySharedPtr m_geom
Definition: Expansion.h:272

References Nektar::LocalRegions::Expansion::m_geom.

Referenced by Nektar::VariableConverter::SetElmtMinHP(), and Nektar::DiffusionLDGNS::v_InitObject().

◆ v_AddRobinEdgeContribution()

void Nektar::LocalRegions::Expansion1D::v_AddRobinEdgeContribution ( const int  vert,
const Array< OneD, const NekDouble > &  primCoeffs,
const Array< OneD, NekDouble > &  incoeffs,
Array< OneD, NekDouble > &  coeffs 
)
protectedvirtual

Given an edge and vector of element coefficients:

  • maps those elemental coefficients corresponding to the trace into an vector.
  • update the element coefficients
  • multiplies the edge vector by the edge mass matrix
  • maps the edge coefficients back onto the elemental coefficients

Definition at line 438 of file Expansion1D.cpp.

441 {
443  "Not set up for non boundary-interior expansions");
444 
445  int map = GetVertexMap(vert);
446  coeffs[map] += primCoeffs[0] * incoeffs[map];
447 }
#define ASSERTL1(condition, msg)
Assert Level 1 – Debugging which is used whether in FULLDEBUG or DEBUG compilation mode....
Definition: ErrorUtil.hpp:249
int GetVertexMap(const int localVertexId, bool useCoeffPacking=false)
Definition: StdExpansion.h:687

References ASSERTL1.

◆ v_AddRobinMassMatrix()

void Nektar::LocalRegions::Expansion1D::v_AddRobinMassMatrix ( const int  vert,
const Array< OneD, const NekDouble > &  primCoeffs,
DNekMatSharedPtr inoutmat 
)
protectedvirtual

Reimplemented from Nektar::LocalRegions::Expansion.

Definition at line 382 of file Expansion1D.cpp.

385 {
387  "Robin boundary conditions are only implemented for "
388  "boundary-interior expanisons");
389  ASSERTL1(inoutmat->GetRows() == inoutmat->GetColumns(),
390  "Assuming that input matrix was square");
391 
392  // Get local Element mapping for vertex point
393  int map = GetVertexMap(vert);
394 
395  // Now need to identify a map which takes the local edge
396  // mass matrix to the matrix stored in inoutmat;
397  // This can currently be deduced from the size of the matrix
398  // - if inoutmat.m_rows() == v_NCoeffs() it is a full
399  // matrix system
400  // - if inoutmat.m_rows() == v_NumBndCoeffs() it is a
401  // boundary CG system
402 
403  int rows = inoutmat->GetRows();
404 
405  if (rows == GetNcoeffs())
406  {
407  // no need to do anything
408  }
409  else if (rows == NumBndryCoeffs()) // same as NumDGBndryCoeffs()
410  {
411  int i;
412  Array<OneD, unsigned int> bmap;
413  GetBoundaryMap(bmap);
414 
415  for (i = 0; i < 2; ++i)
416  {
417  if (map == bmap[i])
418  {
419  map = i;
420  break;
421  }
422  }
423  ASSERTL1(i != 2, "Did not find number in map");
424  }
425 
426  // assumes end points have unit magnitude
427  (*inoutmat)(map, map) += primCoeffs[0];
428 }

References ASSERTL0, and ASSERTL1.

◆ v_GenMatrix()

DNekMatSharedPtr Nektar::LocalRegions::Expansion1D::v_GenMatrix ( const StdRegions::StdMatrixKey mkey)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Reimplemented in Nektar::LocalRegions::SegExp.

Definition at line 54 of file Expansion1D.cpp.

55 {
56  DNekMatSharedPtr returnval;
57 
58  switch (mkey.GetMatrixType())
59  {
61  {
63  "HybridDGHelmholtz matrix not set up "
64  "for non boundary-interior expansions");
65  int i;
66  NekDouble lambdaval =
67  mkey.GetConstFactor(StdRegions::eFactorLambda);
68  NekDouble tau = mkey.GetConstFactor(StdRegions::eFactorTau);
69  int ncoeffs = GetNcoeffs();
70 
71  int coordim = GetCoordim();
72 
77  DNekMat LocMat(ncoeffs, ncoeffs);
78 
79  returnval =
81  DNekMat &Mat = *returnval;
82 
83  Vmath::Zero(ncoeffs * ncoeffs, Mat.GetPtr(), 1);
84 
85  for (i = 0; i < coordim; ++i)
86  {
87  DNekScalMat &Dmat = *GetLocMatrix(DerivType[i]);
88 
89  Mat = Mat + Dmat * invMass * Transpose(Dmat);
90  }
91 
92  // Add end Mass Matrix Contribution
94  Mat = Mat + lambdaval * Mass;
95 
96  Array<OneD, unsigned int> bmap;
97  GetBoundaryMap(bmap);
98 
99  // Add tau*F_e using elemental mass matrices
100  for (i = 0; i < 2; ++i)
101  {
102  Mat(bmap[i], bmap[i]) = Mat(bmap[i], bmap[i]) + tau;
103  }
104  }
105  break;
107  {
108  int j, k;
109  int nbndry = NumDGBndryCoeffs();
110  int ncoeffs = GetNcoeffs();
112  factors[StdRegions::eFactorLambda] =
113  mkey.GetConstFactor(StdRegions::eFactorLambda);
114  factors[StdRegions::eFactorTau] =
115  mkey.GetConstFactor(StdRegions::eFactorTau);
116 
117  Array<OneD, NekDouble> lambda(nbndry);
118  DNekVec Lambda(nbndry, lambda, eWrapper);
119  Array<OneD, NekDouble> ulam(ncoeffs);
120  DNekVec Ulam(ncoeffs, ulam, eWrapper);
121  Array<OneD, NekDouble> f(ncoeffs);
122  DNekVec F(ncoeffs, f, eWrapper);
123 
124  // declare matrix space
125  returnval =
127  DNekMat &Umat = *returnval;
128 
129  // Helmholtz matrix
130  DNekScalMat &invHmat =
132 
133  // for each degree of freedom of the lambda space
134  // calculate Umat entry
135  // Generate Lambda to U_lambda matrix
136  for (j = 0; j < nbndry; ++j)
137  {
138  Vmath::Zero(nbndry, &lambda[0], 1);
139  Vmath::Zero(ncoeffs, &f[0], 1);
140  lambda[j] = 1.0;
141 
143  lambda, f);
144 
145  Ulam = invHmat * F; // generate Ulam from lambda
146 
147  // fill column of matrix
148  for (k = 0; k < ncoeffs; ++k)
149  {
150  Umat(k, j) = Ulam[k];
151  }
152  }
153  }
154  break;
158  {
159  int j = 0;
160  int k = 0;
161  int dir = 0;
162  int nbndry = NumDGBndryCoeffs();
163  int ncoeffs = GetNcoeffs();
164 
165  Array<OneD, NekDouble> lambda(nbndry);
166  DNekVec Lambda(nbndry, lambda, eWrapper);
167 
168  Array<OneD, NekDouble> ulam(ncoeffs);
169  DNekVec Ulam(ncoeffs, ulam, eWrapper);
170  Array<OneD, NekDouble> f(ncoeffs);
171  DNekVec F(ncoeffs, f, eWrapper);
173  factors[StdRegions::eFactorLambda] =
174  mkey.GetConstFactor(StdRegions::eFactorLambda);
175  factors[StdRegions::eFactorTau] =
176  mkey.GetConstFactor(StdRegions::eFactorTau);
177 
178  // declare matrix space
179  returnval =
181  DNekMat &Qmat = *returnval;
182 
183  // Lambda to U matrix
184  DNekScalMat &lamToU =
186 
187  // Inverse mass matrix
189 
190  // Weak Derivative matrix
192  switch (mkey.GetMatrixType())
193  {
195  dir = 0;
197  break;
199  dir = 1;
201  break;
203  dir = 2;
205  break;
206  default:
207  ASSERTL0(false, "Direction not known");
208  break;
209  }
210 
211  // for each degree of freedom of the lambda space
212  // calculate Qmat entry
213  // Generate Lambda to Q_lambda matrix
214  for (j = 0; j < nbndry; ++j)
215  {
216  Vmath::Zero(nbndry, &lambda[0], 1);
217  lambda[j] = 1.0;
218 
219  // for lambda[j] = 1 this is the solution to ulam
220  for (k = 0; k < ncoeffs; ++k)
221  {
222  Ulam[k] = lamToU(k, j);
223  }
224 
225  // -D^T ulam
226  Vmath::Neg(ncoeffs, &ulam[0], 1);
227  F = Transpose(*Dmat) * Ulam;
228 
229  // + \tilde{G} \lambda
230  AddNormTraceInt(dir, lambda, f);
231 
232  // multiply by inverse mass matrix
233  Ulam = invMass * F;
234 
235  // fill column of matrix (Qmat is in column major format)
236  Vmath::Vcopy(ncoeffs, &ulam[0], 1,
237  &(Qmat.GetPtr())[0] + j * ncoeffs, 1);
238  }
239  }
240  break;
242  {
243  int j;
244  int nbndry = NumBndryCoeffs();
245 
247  factors[StdRegions::eFactorLambda] =
248  mkey.GetConstFactor(StdRegions::eFactorLambda);
249  factors[StdRegions::eFactorTau] =
250  mkey.GetConstFactor(StdRegions::eFactorTau);
251 
252  Array<OneD, unsigned int> bmap;
253  Array<OneD, NekDouble> lam(2);
254  GetBoundaryMap(bmap);
255 
256  // declare matrix space
257  returnval =
259  DNekMat &BndMat = *returnval;
260 
261  // Matrix to map Lambda to U
262  DNekScalMat &LamToU =
264 
265  // Matrix to map Lambda to Q
266  DNekScalMat &LamToQ =
268 
269  lam[0] = 1.0;
270  lam[1] = 0.0;
271  for (j = 0; j < nbndry; ++j)
272  {
273  BndMat(0, j) =
274  -LamToQ(bmap[0], j) - factors[StdRegions::eFactorTau] *
275  (LamToU(bmap[0], j) - lam[j]);
276  }
277 
278  lam[0] = 0.0;
279  lam[1] = 1.0;
280  for (j = 0; j < nbndry; ++j)
281  {
282  BndMat(1, j) =
283  LamToQ(bmap[1], j) - factors[StdRegions::eFactorTau] *
284  (LamToU(bmap[1], j) - lam[j]);
285  }
286  }
287  break;
288  default:
289  ASSERTL0(false,
290  "This matrix type cannot be generated from this class");
291  break;
292  }
293 
294  return returnval;
295 }
void AddHDGHelmholtzTraceTerms(const NekDouble tau, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
void AddNormTraceInt(const int dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
static std::shared_ptr< DataType > AllocateSharedPtr(const Args &...args)
Allocate a shared pointer from the memory pool.
std::map< ConstFactorType, NekDouble > ConstFactorMap
Definition: StdRegions.hpp:282
std::shared_ptr< DNekScalMat > DNekScalMatSharedPtr
NekMatrix< NekDouble, StandardMatrixTag > DNekMat
Definition: NekTypeDefs.hpp:50
NekMatrix< InnerMatrixType, BlockMatrixTag > Transpose(NekMatrix< InnerMatrixType, BlockMatrixTag > &rhs)
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:75
double NekDouble
void Neg(int n, T *x, const int incx)
Negate x = -x.
Definition: Vmath.cpp:518
void Zero(int n, T *x, const int incx)
Zero vector.
Definition: Vmath.cpp:492
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1255

References ASSERTL0, ASSERTL1, Nektar::StdRegions::eFactorLambda, Nektar::StdRegions::eFactorTau, Nektar::StdRegions::eHybridDGHelmBndLam, Nektar::StdRegions::eHybridDGHelmholtz, Nektar::StdRegions::eHybridDGLamToQ0, Nektar::StdRegions::eHybridDGLamToQ1, Nektar::StdRegions::eHybridDGLamToQ2, Nektar::StdRegions::eHybridDGLamToU, Nektar::StdRegions::eInvHybridDGHelmholtz, Nektar::StdRegions::eInvMass, Nektar::StdRegions::eMass, Nektar::StdRegions::eWeakDeriv0, Nektar::StdRegions::eWeakDeriv1, Nektar::StdRegions::eWeakDeriv2, Nektar::eWrapper, Nektar::StdRegions::StdMatrixKey::GetConstFactor(), Nektar::StdRegions::StdMatrixKey::GetMatrixType(), Vmath::Neg(), Nektar::Transpose(), Vmath::Vcopy(), and Vmath::Zero().

Referenced by Nektar::LocalRegions::SegExp::v_GenMatrix().

◆ v_GetTraceNormal()

const NormalVector & Nektar::LocalRegions::Expansion1D::v_GetTraceNormal ( const int  edge) const
finalprotectedvirtual

Definition at line 46 of file Expansion1D.cpp.

47 {
48  std::map<int, NormalVector>::const_iterator x;
49  x = m_traceNormals.find(vert);
50  ASSERTL1(x != m_traceNormals.end(), "Vertex normal not computed.");
51  return x->second;
52 }
std::map< int, NormalVector > m_traceNormals
Definition: Expansion.h:275

References ASSERTL1.

◆ v_NormalTraceDerivFactors()

void Nektar::LocalRegions::Expansion1D::v_NormalTraceDerivFactors ( Array< OneD, Array< OneD, NekDouble >> &  factors,
Array< OneD, Array< OneD, NekDouble >> &  d0factors,
Array< OneD, Array< OneD, NekDouble >> &  d1factors 
)
protectedvirtual

: This method gets all of the factors which are required as part of the Gradient Jump Penalty stabilisation and involves the product of the normal and geometric factors along the element trace.

Reimplemented from Nektar::LocalRegions::Expansion.

Definition at line 469 of file Expansion1D.cpp.

473 {
474  boost::ignore_unused(d0factors, d1factors); // for 2D&3D shapes
475  int nquad = GetNumPoints(0);
476  Array<TwoD, const NekDouble> gmat =
477  m_metricinfo->GetDerivFactors(GetPointsKeys());
478 
479  if (factors.size() <= 2)
480  {
481  factors = Array<OneD, Array<OneD, NekDouble>>(2);
482  factors[0] = Array<OneD, NekDouble>(1);
483  factors[1] = Array<OneD, NekDouble>(1);
484  }
485 
486  // Outwards normal
487  const Array<OneD, const Array<OneD, NekDouble>> &normal_0 =
488  GetTraceNormal(0);
489  const Array<OneD, const Array<OneD, NekDouble>> &normal_1 =
490  GetTraceNormal(1);
491 
492  if (m_metricinfo->GetGtype() == SpatialDomains::eDeformed)
493  {
494  factors[0][0] = gmat[0][nquad - 1] * normal_0[0][0];
495  factors[1][0] = gmat[0][0] * normal_1[0][0];
496 
497  for (int n = 1; n < normal_0.size(); ++n)
498  {
499  factors[0][0] += gmat[n][0] * normal_0[n][0];
500  factors[1][0] += gmat[n][nquad - 1] * normal_1[n][0];
501  }
502  }
503  else
504  {
505  factors[0][0] = gmat[0][0] * normal_0[0][0];
506  factors[1][0] = gmat[0][0] * normal_1[0][0];
507 
508  for (int n = 1; n < normal_0.size(); ++n)
509  {
510  factors[0][0] += gmat[n][0] * normal_0[n][0];
511  factors[1][0] += gmat[n][0] * normal_1[n][0];
512  }
513  }
514 }
SpatialDomains::GeomFactorsSharedPtr m_metricinfo
Definition: Expansion.h:273
const NormalVector & GetTraceNormal(const int id)
Definition: Expansion.cpp:250
const LibUtilities::PointsKeyVector GetPointsKeys() const
@ eDeformed
Geometry is curved or has non-constant factors.

References Nektar::SpatialDomains::eDeformed.

◆ v_ReOrientTracePhysMap()

void Nektar::LocalRegions::Expansion1D::v_ReOrientTracePhysMap ( const StdRegions::Orientation  orient,
Array< OneD, int > &  idmap,
const int  nq0,
const int  nq1 
)
protectedvirtual

Reimplemented from Nektar::LocalRegions::Expansion.

Definition at line 516 of file Expansion1D.cpp.

519 {
520  boost::ignore_unused(orient, nq0, nq1);
521 
522  if (idmap.size() != 1)
523  {
524  idmap = Array<OneD, int>(1);
525  }
526 
527  idmap[0] = 0;
528 }

◆ v_TraceNormLen()

void Nektar::LocalRegions::Expansion1D::v_TraceNormLen ( const int  traceid,
NekDouble h,
NekDouble p 
)
protectedvirtual

Reimplemented from Nektar::LocalRegions::Expansion.

Definition at line 530 of file Expansion1D.cpp.

531 {
532  boost::ignore_unused(traceid);
533  h = GetGeom()->GetVertex(1)->dist(*GetGeom()->GetVertex(0));
534  p = m_ncoeffs - 1;
535 }
SpatialDomains::GeometrySharedPtr GetGeom() const
Definition: Expansion.cpp:166

References CellMLToNektar.cellml_metadata::p.

◆ v_VectorFlux()

NekDouble Nektar::LocalRegions::Expansion1D::v_VectorFlux ( const Array< OneD, Array< OneD, NekDouble >> &  vec)
protectedvirtual

Reimplemented from Nektar::LocalRegions::Expansion.

Definition at line 449 of file Expansion1D.cpp.

451 {
452  const Array<OneD, const Array<OneD, NekDouble>> &normals =
453  GetLeftAdjacentElementExp()->GetTraceNormal(
455 
456  int nq = m_base[0]->GetNumPoints();
457  Array<OneD, NekDouble> Fn(nq);
458  Vmath::Vmul(nq, &vec[0][0], 1, &normals[0][0], 1, &Fn[0], 1);
459  Vmath::Vvtvp(nq, &vec[1][0], 1, &normals[1][0], 1, &Fn[0], 1, &Fn[0], 1);
460 
461  return Integral(Fn);
462 }
ExpansionSharedPtr GetLeftAdjacentElementExp() const
Definition: Expansion.h:433
int GetLeftAdjacentElementTrace() const
Definition: Expansion.h:446
Array< OneD, LibUtilities::BasisSharedPtr > m_base
NekDouble Integral(const Array< OneD, const NekDouble > &inarray)
This function integrates the specified function over the domain.
Definition: StdExpansion.h:481
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.cpp:209
void Vvtvp(int n, const T *w, const int incw, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
vvtvp (vector times vector plus vector): z = w*x + y
Definition: Vmath.cpp:574

References Vmath::Vmul(), and Vmath::Vvtvp().