MatrixBase.cpp

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///////////////////////////////////////////////////////////////////////////////
//
// File: MatrixBase.cpp
//
// For more information, please see: http://www.nektar.info
//
// The MIT License
//
// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
// Department of Aeronautics, Imperial College London (UK), and Scientific
// Computing and Imaging Institute, University of Utah (USA).
//
// Permission is hereby granted, free of charge, to any person obtaining a
// copy of this software and associated documentation files (the "Software"),
// to deal in the Software without restriction, including without limitation
// the rights to use, copy, modify, merge, publish, distribute, sublicense,
// and/or sell copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included
// in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
// THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
// DEALINGS IN THE SOFTWARE.
//
// Description:
//
///////////////////////////////////////////////////////////////////////////////
 
#include <LibUtilities/LinearAlgebra/MatrixBase.hpp>
 
namespace Nektar
{
 
template <typename DataType> ConstMatrix<DataType>::~ConstMatrix()
{
}
 
template <typename DataType>
typename boost::call_traits<DataType>::value_type ConstMatrix<
    DataType>::operator()(unsigned int row, unsigned int column) const
{
    ASSERTL2(row < GetRows(),
             std::string("Row ") + std::to_string(row) +
                 std::string(" requested in a matrix with a maximum of ") +
                 std::to_string(GetRows()) + std::string(" rows"));
    ASSERTL2(column < GetColumns(),
             std::string("Column ") + std::to_string(column) +
                 std::string(" requested in a matrix with a maximum of ") +
                 std::to_string(GetColumns()) + std::string(" columns"));
    return v_GetValue(row, column);
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::GetStorageSize() const
{
    return v_GetStorageSize();
}
 
template <typename DataType> unsigned int ConstMatrix<DataType>::GetRows() const
{
    return GetTransposedRows(GetTransposeFlag());
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::GetTransposedRows(char transpose) const
{
    if (transpose == 'N')
    {
        return m_size[0];
    }
    else
    {
        return m_size[1];
    }
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::GetColumns() const
{
    return GetTransposedColumns(GetTransposeFlag());
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::GetTransposedColumns(char transpose) const
{
    if (transpose == 'N')
    {
        return m_size[1];
    }
    else
    {
        return m_size[0];
    }
}
 
template <typename DataType>
const unsigned int *ConstMatrix<DataType>::GetSize() const
{
    return m_size;
}
 
template <typename DataType> void ConstMatrix<DataType>::Transpose()
{
    if (m_transpose == 'N')
    {
        m_transpose = 'T';
    }
    else
    {
        m_transpose = 'N';
    }
    v_Transpose();
}
 
template <typename DataType>
char ConstMatrix<DataType>::GetTransposeFlag() const
{
    return v_GetTransposeFlag();
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::CalculateIndex(
    MatrixStorage type, unsigned int row, unsigned int col,
    unsigned int numRows, unsigned int numColumns, const char transpose,
    unsigned int numSubDiags, unsigned int numSuperDiags)
{
    if (transpose == 'T')
    {
        std::swap(row, col);
    }
    switch (type)
    {
        case eFULL:
            return FullMatrixFuncs::CalculateIndex(numRows, numColumns, row,
                                                   col);
            break;
        case eDIAGONAL:
            return DiagonalMatrixFuncs::CalculateIndex(row, col);
            break;
        case eUPPER_TRIANGULAR:
            return UpperTriangularMatrixFuncs::CalculateIndex(row, col);
            break;
        case eLOWER_TRIANGULAR:
            return LowerTriangularMatrixFuncs::CalculateIndex(numColumns, row,
                                                              col);
            break;
        case eSYMMETRIC:
        case ePOSITIVE_DEFINITE_SYMMETRIC:
            return SymmetricMatrixFuncs::CalculateIndex(row, col);
            break;
        case eBANDED:
            return BandedMatrixFuncs::CalculateIndex(
                numRows, numColumns, row, col, numSubDiags, numSuperDiags);
            break;
        case eSYMMETRIC_BANDED:
        case ePOSITIVE_DEFINITE_SYMMETRIC_BANDED:
        {
            ASSERTL1(numSubDiags == numSuperDiags,
                     std::string("Number of sub- and superdiagonals should ") +
                         std::string("be equal for a symmetric banded matrix"));
            return SymmetricBandedMatrixFuncs::CalculateIndex(row, col,
                                                              numSuperDiags);
        }
        break;
        case eUPPER_TRIANGULAR_BANDED:
            NEKERROR(ErrorUtil::efatal, "Not yet implemented.");
            break;
        case eLOWER_TRIANGULAR_BANDED:
            NEKERROR(ErrorUtil::efatal, "Not yet implemented.");
            break;
 
        default:
            NEKERROR(ErrorUtil::efatal, "Unhandled matrix type");
    }
 
    return std::numeric_limits<unsigned int>::max();
}
 
template <typename DataType>
unsigned int ConstMatrix<DataType>::GetRequiredStorageSize(
    MatrixStorage type, unsigned int rows, unsigned int columns,
    unsigned int subDiags, unsigned int superDiags)
{
    switch (type)
    {
        case eFULL:
            return FullMatrixFuncs::GetRequiredStorageSize(rows, columns);
            break;
        case eDIAGONAL:
            return DiagonalMatrixFuncs::GetRequiredStorageSize(rows, columns);
            break;
        case eUPPER_TRIANGULAR:
            return UpperTriangularMatrixFuncs::GetRequiredStorageSize(rows,
                                                                      columns);
            break;
        case eLOWER_TRIANGULAR:
            return LowerTriangularMatrixFuncs::GetRequiredStorageSize(rows,
                                                                      columns);
            break;
        case eSYMMETRIC:
        case ePOSITIVE_DEFINITE_SYMMETRIC:
            return SymmetricMatrixFuncs::GetRequiredStorageSize(rows, columns);
            break;
        case eBANDED:
            return BandedMatrixFuncs::GetRequiredStorageSize(
                rows, columns, subDiags, superDiags);
            break;
        case eSYMMETRIC_BANDED:
        case ePOSITIVE_DEFINITE_SYMMETRIC_BANDED:
        {
            ASSERTL1(subDiags == superDiags,
                     std::string("Number of sub- and superdiagonals should ") +
                         std::string("be equal for a symmetric banded matrix"));
            return SymmetricBandedMatrixFuncs::GetRequiredStorageSize(
                rows, columns, superDiags);
        }
        break;
        case eUPPER_TRIANGULAR_BANDED:
            NEKERROR(ErrorUtil::efatal, "Unhandled matrix type");
            break;
        case eLOWER_TRIANGULAR_BANDED:
            NEKERROR(ErrorUtil::efatal, "Unhandled matrix type");
            break;
 
        default:
            NEKERROR(ErrorUtil::efatal, "Unhandled matrix type");
    }
 
    return 0;
}
 
template <typename DataType>
ConstMatrix<DataType>::ConstMatrix(unsigned int rows, unsigned int columns,
                                   MatrixStorage policy)
    : m_size(), m_transpose('N'), m_storageType(policy)
{
    m_size[0] = rows;
    m_size[1] = columns;
}
 
template <typename DataType>
ConstMatrix<DataType>::ConstMatrix(const ConstMatrix<DataType> &rhs)
    : m_size(), m_transpose(rhs.m_transpose), m_storageType(rhs.m_storageType)
{
    m_size[0] = rhs.m_size[0];
    m_size[1] = rhs.m_size[1];
}
 
template <typename DataType>
ConstMatrix<DataType> &ConstMatrix<DataType>::operator=(
    const ConstMatrix<DataType> &rhs)
{
    m_size[0]     = rhs.m_size[0];
    m_size[1]     = rhs.m_size[1];
    m_transpose   = rhs.m_transpose;
    m_storageType = rhs.m_storageType;
    return *this;
}
 
template <typename DataType>
void ConstMatrix<DataType>::Resize(unsigned int rows, unsigned int columns)
{
    m_size[0] = rows;
    m_size[1] = columns;
}
 
template <typename DataType>
void ConstMatrix<DataType>::SetTransposeFlag(char newValue)
{
    m_transpose = newValue;
}
 
template <typename DataType> void ConstMatrix<DataType>::v_Transpose()
{
}
 
template <typename DataType>
char ConstMatrix<DataType>::v_GetTransposeFlag() const
{
    return m_transpose;
}
 
template <typename DataType> Matrix<DataType>::~Matrix()
{
}
 
template <typename DataType>
void Matrix<DataType>::SetValue(
    unsigned int row, unsigned int column,
    typename boost::call_traits<DataType>::const_reference d)
{
    ASSERTL2(row < this->GetRows(),
             std::string("Row ") + std::to_string(row) +
                 std::string(" requested in a matrix with a maximum of ") +
                 std::to_string(this->GetRows()) + std::string(" rows"));
    ASSERTL2(column < this->GetColumns(),
             std::string("Column ") + std::to_string(column) +
                 std::string(" requested in a matrix with a maximum of ") +
                 std::to_string(this->GetColumns()) + std::string(" columns"));
    v_SetValue(row, column, d);
}
 
template <typename DataType>
Matrix<DataType>::Matrix(unsigned int rows, unsigned int columns,
                         MatrixStorage policy)
    : ConstMatrix<DataType>(rows, columns, policy)
{
}
 
template <typename DataType>
Matrix<DataType>::Matrix(const Matrix<DataType> &rhs)
    : ConstMatrix<DataType>(rhs)
{
}
 
template <typename DataType>
Matrix<DataType> &Matrix<DataType>::operator=(const Matrix<DataType> &rhs)
{
    ConstMatrix<DataType>::operator=(rhs);
    return *this;
}
 
template <typename DataType>
Matrix<DataType> &Matrix<DataType>::operator=(const ConstMatrix<DataType> &rhs)
{
    ConstMatrix<DataType>::operator=(rhs);
    return *this;
}
 
template LIB_UTILITIES_EXPORT class ConstMatrix<NekDouble>;
template LIB_UTILITIES_EXPORT class Matrix<NekDouble>;
 
template LIB_UTILITIES_EXPORT class ConstMatrix<int>;
template LIB_UTILITIES_EXPORT class Matrix<int>;
 
template LIB_UTILITIES_EXPORT class ConstMatrix<unsigned int>;
template LIB_UTILITIES_EXPORT class Matrix<unsigned int>;
 
template LIB_UTILITIES_EXPORT class ConstMatrix<float>;
template LIB_UTILITIES_EXPORT class Matrix<float>;
} // namespace Nektar