Nektar::FieldUtils::ProcessHomogeneousStretch Class Reference

This processing module stretches the homogeneous direction of a 3DH1D expansion by an integer factor. More...

#include <ProcessHomogeneousStretch.h>

Inheritance diagram for Nektar::FieldUtils::ProcessHomogeneousStretch:

Public Member Functions
	ProcessHomogeneousStretch (FieldSharedPtr f)
virtual	~ProcessHomogeneousStretch ()
Public Member Functions inherited from Nektar::FieldUtils::ProcessModule
	ProcessModule ()
	ProcessModule (FieldSharedPtr p_f)
Public Member Functions inherited from Nektar::FieldUtils::Module
FIELD_UTILS_EXPORT	Module (FieldSharedPtr p_f)
virtual	~Module ()=default
void	Process (po::variables_map &vm)
std::string	GetModuleName ()
std::string	GetModuleDescription ()
const ConfigOption &	GetConfigOption (const std::string &key) const
ModulePriority	GetModulePriority ()
FIELD_UTILS_EXPORT void	RegisterConfig (std::string key, std::string value="")
	Register a configuration option with a module. More...
FIELD_UTILS_EXPORT void	PrintConfig ()
	Print out all configuration options for a module. More...
FIELD_UTILS_EXPORT void	SetDefaults ()
	Sets default configuration options for those which have not been set. More...
FIELD_UTILS_EXPORT void	AddFile (std::string fileType, std::string fileName)
FIELD_UTILS_EXPORT void	EvaluateTriFieldAtEquiSpacedPts (LocalRegions::ExpansionSharedPtr &exp, const Array< OneD, const NekDouble > &infield, Array< OneD, NekDouble > &outfield)

Static Public Member Functions
static std::shared_ptr< Module >	create (FieldSharedPtr f)
	Creates an instance of this class. More...

Static Public Attributes
static ModuleKey	className

Protected Member Functions
virtual void	v_Process (po::variables_map &vm) override
	Write mesh to output file. More...
virtual std::string	v_GetModuleName () override
virtual std::string	v_GetModuleDescription () override
virtual ModulePriority	v_GetModulePriority () override
Protected Member Functions inherited from Nektar::FieldUtils::Module
	Module ()

Additional Inherited Members
Public Attributes inherited from Nektar::FieldUtils::Module
FieldSharedPtr	m_f
	Field object. More...
Protected Attributes inherited from Nektar::FieldUtils::Module
std::map< std::string, ConfigOption >	m_config
	List of configuration values. More...
std::set< std::string >	m_allowedFiles
	List of allowed file formats. More...

Detailed Description

This processing module stretches the homogeneous direction of a 3DH1D expansion by an integer factor.

Definition at line 49 of file ProcessHomogeneousStretch.h.

Constructor & Destructor Documentation

ProcessHomogeneousStretch()

Nektar::FieldUtils::ProcessHomogeneousStretch::ProcessHomogeneousStretch

(

FieldSharedPtr

f

)

Definition at line 60 of file ProcessHomogeneousStretch.cpp.

    : ProcessModule(f)
{
    m_config["factor"] =
        ConfigOption(false, "NotSet", "integer stretch factor");
}

References Nektar::FieldUtils::Module::m_config.

~ProcessHomogeneousStretch()

Nektar::FieldUtils::ProcessHomogeneousStretch::~ProcessHomogeneousStretch ( )

virtual

Definition at line 67 of file ProcessHomogeneousStretch.cpp.

{
}

Member Function Documentation

create()

static std::shared_ptr<Module> Nektar::FieldUtils::ProcessHomogeneousStretch::create ( FieldSharedPtr  f )

inlinestatic

Creates an instance of this class.

Definition at line 53 of file ProcessHomogeneousStretch.h.

    {
        return MemoryManager<ProcessHomogeneousStretch>::AllocateSharedPtr(f);
    }

References Nektar::MemoryManager< DataType >::AllocateSharedPtr().

v_GetModuleDescription()

virtual std::string Nektar::FieldUtils::ProcessHomogeneousStretch::v_GetModuleDescription ( )

inlineoverrideprotectedvirtual

Reimplemented from Nektar::FieldUtils::Module.

Definition at line 71 of file ProcessHomogeneousStretch.h.

    {
        return "Stretching expansion";
    }

v_GetModuleName()

virtual std::string Nektar::FieldUtils::ProcessHomogeneousStretch::v_GetModuleName ( )

inlineoverrideprotectedvirtual

Reimplemented from Nektar::FieldUtils::Module.

Definition at line 66 of file ProcessHomogeneousStretch.h.

    {
        return "ProcessHomogeneousStretch";
    }

v_GetModulePriority()

virtual ModulePriority Nektar::FieldUtils::ProcessHomogeneousStretch::v_GetModulePriority ( )

inlineoverrideprotectedvirtual

Reimplemented from Nektar::FieldUtils::Module.

Definition at line 76 of file ProcessHomogeneousStretch.h.

    {
        return eModifyExp;
    }

References Nektar::FieldUtils::eModifyExp.

v_Process()

void Nektar::FieldUtils::ProcessHomogeneousStretch::v_Process ( po::variables_map &  vm )

overrideprotectedvirtual

Write mesh to output file.

Reimplemented from Nektar::FieldUtils::Module.

Definition at line 71 of file ProcessHomogeneousStretch.cpp.

{
    m_f->SetUpExp(vm);
 
    // Skip in case of empty partition
    if (m_f->m_exp[0]->GetNumElmts() == 0)
    {
        return;
    }
 
    ASSERTL0(m_f->m_numHomogeneousDir == 1,
             "ProcessHomogeneousStretch only works for Homogeneous1D.");
 
    ASSERTL0(m_config["factor"].m_beenSet,
             "Missing parameter factor for ProcessHomogeneousStretch");
 
    int factor  = m_config["factor"].as<int>();
    int nfields = m_f->m_variables.size();
    int nplanes = m_f->m_exp[0]->GetHomogeneousBasis()->GetZ().size();
 
    ASSERTL0(factor > 1, "Parameter factor must be an int greater than 1.");
 
    int nstrips;
    m_f->m_session->LoadParameter("Strip_Z", nstrips, 1);
 
    for (int s = 0; s < nstrips; ++s)
    {
        for (int i = 0; i < nfields; ++i)
        {
            int n       = s * nfields + i;
            int ncoeffs = m_f->m_exp[n]->GetPlane(0)->GetNcoeffs();
 
            // Loop planes backwards so we can copy in place
            for (int p = nplanes - 1; p > 1; --p)
            {
                int newP = 2 * factor * (p / 2) + p % 2;
                if (newP < nplanes)
                {
                    Vmath::Vcopy(
                        ncoeffs, m_f->m_exp[n]->GetPlane(p)->GetCoeffs(), 1,
                        m_f->m_exp[n]->GetPlane(newP)->UpdateCoeffs(), 1);
                }
                Vmath::Zero(ncoeffs, m_f->m_exp[n]->GetPlane(p)->UpdateCoeffs(),
                            1);
            }
 
            m_f->m_exp[n]->BwdTrans(m_f->m_exp[n]->GetCoeffs(),
                                    m_f->m_exp[n]->UpdatePhys());
            m_f->m_exp[n]->SetHomoLen(factor * m_f->m_exp[n]->GetHomoLen());
        }
    }
}

References ASSERTL0, Nektar::FieldUtils::Module::m_config, Nektar::FieldUtils::Module::m_f, CellMLToNektar.cellml_metadata::p, Vmath::Vcopy(), and Vmath::Zero().

Member Data Documentation

className

ModuleKey Nektar::FieldUtils::ProcessHomogeneousStretch::className

static

Initial value:

=
    GetModuleFactory().RegisterCreatorFunction(
        ModuleKey(eProcessModule, "homstretch"),
        ProcessHomogeneousStretch::create,
        "Stretches homogeneous direction of a 3DH1D expansion, requires factor "
        "to be "
        "defined. The number of modes in the final expansion can be defined "
        "using"
        " --output-points-hom-z.")

Definition at line 57 of file ProcessHomogeneousStretch.h.