SparseUtils.cpp

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///////////////////////////////////////////////////////////////////////////////
//
// File: SparseUtils.cpp
//
// For more information, please see: http://www.nektar.info
//
// The MIT License
//
// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
// Department of Aeronautics, Imperial College London (UK), and Scientific
// Computing and Imaging Institute, University of Utah (USA).
//
// Permission is hereby granted, free of charge, to any person obtaining a
// copy of this software and associated documentation files (the "Software"),
// to deal in the Software without restriction, including without limitation
// the rights to use, copy, modify, merge, publish, distribute, sublicense,
// and/or sell copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included
// in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
// THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
// DEALINGS IN THE SOFTWARE.
//
// Description: common utility functions for sparse matrices
//
///////////////////////////////////////////////////////////////////////////////
 
#include <map>
#include <utility>
 
#include <LibUtilities/LinearAlgebra/SparseDiagBlkMatrix.hpp>
#include <LibUtilities/LinearAlgebra/SparseMatrix.hpp>
#include <LibUtilities/LinearAlgebra/SparseUtils.hpp>
#include <LibUtilities/LinearAlgebra/StorageSmvBsr.hpp>
 
namespace Nektar
{
 
void convertCooToBco(const unsigned int blkDim, const COOMatType &cooMat,
                     BCOMatType &bcoMat)
{
    COOMatTypeConstIt entry;
    BCOMatTypeConstIt blk;
    int rowcoord, localRow, blkRowCoord;
    int colcoord, localCol, blkColCoord;
 
    for (entry = cooMat.begin(); entry != cooMat.end(); entry++)
    {
        rowcoord = (entry->first).first;
        colcoord = (entry->first).second;
 
        blkRowCoord = rowcoord / blkDim;
        blkColCoord = colcoord / blkDim;
 
        CoordType blkCoords = std::make_pair(blkRowCoord, blkColCoord);
        blk                 = bcoMat.find(blkCoords);
        if (blk == bcoMat.end())
        {
            BCOEntryType b(blkDim * blkDim, 0.0);
            bcoMat[blkCoords] = b;
        }
 
        localRow = rowcoord % blkDim;
        localCol = colcoord % blkDim;
 
        // transpose it: NIST SpBLAS expects Fortran ordering
        // of dense subblocks
        const unsigned int localoffset   = localRow + localCol * blkDim;
        (bcoMat[blkCoords])[localoffset] = entry->second;
    }
}
 
template <typename SparseStorageType>
std::ostream &operator<<(std::ostream &os,
                         const NekSparseMatrix<SparseStorageType> &rhs)
{
    int oswidth     = 9;
    int osprecision = 6;
 
    for (unsigned int i = 0; i < rhs.GetRows(); ++i)
    {
        os << "[";
        for (unsigned int j = 0; j < rhs.GetColumns(); ++j)
        {
            os.width(oswidth);
            os.precision(osprecision);
            os << rhs(i, j);
            if (j != rhs.GetColumns() - 1)
            {
                os << ", ";
            }
        }
        os << "]";
        if (i != rhs.GetRows() - 1)
        {
            os << std::endl;
        }
    }
    return os;
}
 
template <typename SparseStorageType>
std::ostream &operator<<(std::ostream &os,
                         const NekSparseDiagBlkMatrix<SparseStorageType> &rhs)
{
    int oswidth     = 9;
    int osprecision = 6;
 
    for (unsigned int i = 0; i < rhs.GetRows(); ++i)
    {
        os << "[";
        for (unsigned int j = 0; j < rhs.GetColumns(); ++j)
        {
            os.width(oswidth);
            os.precision(osprecision);
            os << rhs(i, j);
            if (j != rhs.GetColumns() - 1)
            {
                os << ", ";
            }
        }
        os << "]";
        if (i != rhs.GetRows() - 1)
        {
            os << std::endl;
        }
    }
    return os;
}
 
template std::ostream &operator<<(
    std::ostream &os, const NekSparseMatrix<StorageSmvBsr<NekDouble>> &rhs);
template std::ostream &operator<<(
    std::ostream &os,
    const NekSparseDiagBlkMatrix<StorageSmvBsr<NekDouble>> &rhs);
 
} // namespace Nektar