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Nektar::LinearisedAdvection Class Reference

#include <LinearisedAdvection.h>

Inheritance diagram for Nektar::LinearisedAdvection:
[legend]

Static Public Member Functions

static SolverUtils::AdvectionSharedPtr create (std::string)
 Creates an instance of this class. More...
 

Static Public Attributes

static std::string className
 Name of class. More...
 

Protected Member Functions

DNekBlkMatSharedPtr GetFloquetBlockMatrix (FloquetMatType mattype, bool UseContCoeffs=false) const
 
DNekBlkMatSharedPtr GenFloquetBlockMatrix (FloquetMatType mattype, bool UseContCoeffs=false) const
 
 LinearisedAdvection ()
 
 ~LinearisedAdvection () override
 
void v_InitObject (LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields) override
 Initialises the advection object. More...
 
void v_Advect (const int nConvectiveFields, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields, const Array< OneD, Array< OneD, NekDouble > > &advVel, const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const NekDouble &time, const Array< OneD, Array< OneD, NekDouble > > &pFwd=NullNekDoubleArrayOfArray, const Array< OneD, Array< OneD, NekDouble > > &pBwd=NullNekDoubleArrayOfArray) override
 Advects a vector field. More...
 
void v_SetBaseFlow (const Array< OneD, Array< OneD, NekDouble > > &inarray, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields) override
 Overrides the base flow used during linearised advection. More...
 
void UpdateBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble time)
 
void UpdateGradBase (const int var, const MultiRegions::ExpListSharedPtr &field)
 
void DFT (const std::string file, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
 
void ImportFldBase (std::string pInfile, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, int slice)
 Import Base flow. More...
 
virtual SOLVER_UTILS_EXPORT void v_InitObject (LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields)
 Initialises the advection object. More...
 
virtual SOLVER_UTILS_EXPORT void v_Advect (const int nConvectiveFields, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields, const Array< OneD, Array< OneD, NekDouble > > &advVel, const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const NekDouble &time, const Array< OneD, Array< OneD, NekDouble > > &pFwd=NullNekDoubleArrayOfArray, const Array< OneD, Array< OneD, NekDouble > > &pBwd=NullNekDoubleArrayOfArray)=0
 Advects a vector field. More...
 
virtual SOLVER_UTILS_EXPORT void v_SetBaseFlow (const Array< OneD, Array< OneD, NekDouble > > &inarray, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields)
 Overrides the base flow used during linearised advection. More...
 

Protected Attributes

LibUtilities::SessionReaderSharedPtr m_session
 
int m_spacedim
 
int m_expdim
 
Array< OneD, Array< OneD, NekDouble > > m_baseflow
 Storage for base flow. More...
 
Array< OneD, Array< OneD, NekDouble > > m_gradBase
 
int m_start
 number of slices More...
 
int m_skip
 
int m_slices
 
NekDouble m_period
 period length More...
 
int m_isperiodic
 
int m_interporder
 
Array< OneD, Array< OneD, NekDouble > > m_interp
 interpolation vector More...
 
LibUtilities::NektarFFTSharedPtr m_FFT
 auxiliary variables More...
 
Array< OneD, NekDoublem_tmpIN
 
Array< OneD, NekDoublem_tmpOUT
 
bool m_useFFTW
 
bool m_singleMode
 flag to determine if use single mode or not More...
 
bool m_halfMode
 flag to determine if use half mode or not More...
 
bool m_multipleModes
 flag to determine if use multiple mode or not More...
 
FloquetBlockMatrixMapShPtr m_FloquetBlockMat
 
- Protected Attributes inherited from Nektar::SolverUtils::Advection
AdvectionFluxVecCB m_fluxVector
 Callback function to the flux vector (set when advection is in conservative form). More...
 
RiemannSolverSharedPtr m_riemann
 Riemann solver for DG-type schemes. More...
 
int m_spaceDim
 Storage for space dimension. Used for homogeneous extension. More...
 

Private Types

enum  FloquetMatType { eForwardsCoeff , eForwardsPhys }
 
enum  HomogeneousType { eHomogeneous1D , eHomogeneous2D , eHomogeneous3D , eNotHomogeneous }
 Parameter for homogeneous expansions. More...
 
typedef std::map< FloquetMatType, DNekBlkMatSharedPtrFloquetBlockMatrixMap
 A map between matrix keys and their associated block matrices. More...
 
typedef std::shared_ptr< FloquetBlockMatrixMapFloquetBlockMatrixMapShPtr
 A shared pointer to a BlockMatrixMap. More...
 

Private Attributes

bool m_useFFT
 flag to determine if use or not the FFT for transformations More...
 
enum HomogeneousType m_HomogeneousType
 
NekDouble m_LhomX
 physical length in X direction (if homogeneous) More...
 
NekDouble m_LhomY
 physical length in Y direction (if homogeneous) More...
 
NekDouble m_LhomZ
 physical length in Z direction (if homogeneous) More...
 
int m_npointsX
 number of points in X direction (if homogeneous) More...
 
int m_npointsY
 number of points in Y direction (if homogeneous) More...
 
int m_npointsZ
 number of points in Z direction (if homogeneous) More...
 
int m_HomoDirec
 number of homogenous directions More...
 
int m_NumMode
 Mode to use in case of single mode analysis. More...
 
SpatialDomains::BoundaryConditionsSharedPtr m_boundaryConditions
 

Friends

class MemoryManager< LinearisedAdvection >
 

Additional Inherited Members

- Public Member Functions inherited from Nektar::SolverUtils::Advection
virtual SOLVER_UTILS_EXPORT ~Advection ()
 
SOLVER_UTILS_EXPORT void InitObject (LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields)
 Interface function to initialise the advection object. More...
 
SOLVER_UTILS_EXPORT void Advect (const int nConvectiveFields, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields, const Array< OneD, Array< OneD, NekDouble > > &advVel, const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const NekDouble &time, const Array< OneD, Array< OneD, NekDouble > > &pFwd=NullNekDoubleArrayOfArray, const Array< OneD, Array< OneD, NekDouble > > &pBwd=NullNekDoubleArrayOfArray)
 Interface function to advect the vector field. More...
 
template<typename FuncPointerT , typename ObjectPointerT >
void SetFluxVector (FuncPointerT func, ObjectPointerT obj)
 Set the flux vector callback function. More...
 
void SetRiemannSolver (RiemannSolverSharedPtr riemann)
 Set a Riemann solver object for this advection object. More...
 
void SetFluxVector (AdvectionFluxVecCB fluxVector)
 Set the flux vector callback function. More...
 
void SetBaseFlow (const Array< OneD, Array< OneD, NekDouble > > &inarray, const Array< OneD, MultiRegions::ExpListSharedPtr > &fields)
 Set the base flow used for linearised advection objects. More...
 
template<typename DataType , typename TypeNekBlkMatSharedPtr >
SOLVER_UTILS_EXPORT void AddTraceJacToMat (const int nConvectiveFields, const int nSpaceDim, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const Array< OneD, TypeNekBlkMatSharedPtr > &TracePntJacCons, Array< OneD, Array< OneD, TypeNekBlkMatSharedPtr > > &gmtxarray, const Array< OneD, TypeNekBlkMatSharedPtr > &TracePntJacGrad, const Array< OneD, Array< OneD, DataType > > &TracePntJacGradSign)
 
template<typename DataType , typename TypeNekBlkMatSharedPtr >
void CalcJacobTraceInteg (const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const int m, const int n, const Array< OneD, const TypeNekBlkMatSharedPtr > &PntJac, const Array< OneD, const Array< OneD, DataType > > &PntJacSign, Array< OneD, DNekMatSharedPtr > &TraceJacFwd, Array< OneD, DNekMatSharedPtr > &TraceJacBwd)
 
template<typename DataType , typename TypeNekBlkMatSharedPtr >
void AddTraceJacToMat (const int nConvectiveFields, const int nSpaceDim, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const Array< OneD, TypeNekBlkMatSharedPtr > &TracePntJacCons, Array< OneD, Array< OneD, TypeNekBlkMatSharedPtr > > &gmtxarray, const Array< OneD, TypeNekBlkMatSharedPtr > &TracePntJacGrad, const Array< OneD, Array< OneD, DataType > > &TracePntJacGradSign)
 

Detailed Description

Definition at line 44 of file LinearisedAdvection.h.

Member Typedef Documentation

◆ FloquetBlockMatrixMap

A map between matrix keys and their associated block matrices.

Definition at line 54 of file LinearisedAdvection.h.

◆ FloquetBlockMatrixMapShPtr

A shared pointer to a BlockMatrixMap.

Definition at line 56 of file LinearisedAdvection.h.

Member Enumeration Documentation

◆ FloquetMatType

Enumerator
eForwardsCoeff 
eForwardsPhys 

Definition at line 46 of file LinearisedAdvection.h.

◆ HomogeneousType

Parameter for homogeneous expansions.

Enumerator
eHomogeneous1D 
eHomogeneous2D 
eHomogeneous3D 
eNotHomogeneous 

Definition at line 146 of file LinearisedAdvection.h.

Constructor & Destructor Documentation

◆ LinearisedAdvection()

Nektar::LinearisedAdvection::LinearisedAdvection ( )
protected

Constructor. Creates ...

Parameters

param

Definition at line 55 of file LinearisedAdvection.cpp.

55 : Advection()
56{
57}

◆ ~LinearisedAdvection()

Nektar::LinearisedAdvection::~LinearisedAdvection ( )
overrideprotected

Definition at line 264 of file LinearisedAdvection.cpp.

265{
266}

Member Function Documentation

◆ create()

static SolverUtils::AdvectionSharedPtr Nektar::LinearisedAdvection::create ( std::string  )
inlinestatic

Creates an instance of this class.

Definition at line 62 of file LinearisedAdvection.h.

63 {
65 }
static std::shared_ptr< DataType > AllocateSharedPtr(const Args &...args)
Allocate a shared pointer from the memory pool.

References Nektar::MemoryManager< DataType >::AllocateSharedPtr().

◆ DFT()

void Nektar::LinearisedAdvection::DFT ( const std::string  file,
Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields 
)
protected

Definition at line 667 of file LinearisedAdvection.cpp.

669{
670 size_t ConvectedFields = m_baseflow.size() - 1;
671 size_t npoints = m_baseflow[0].size();
672 m_interp = Array<OneD, Array<OneD, NekDouble>>(ConvectedFields);
673
674 for (size_t i = 0; i < ConvectedFields; ++i)
675 {
676 m_interp[i] = Array<OneD, NekDouble>(npoints * m_slices, 0.0);
677 }
678
679 // Import the slides into auxiliary vector
680 // The base flow should be stored in the form "filename_%d.ext"
681 // A subdirectory can also be included, such as "dir/filename_%d.ext"
682 size_t found = file.find("%d");
683 ASSERTL0(found != string::npos &&
684 file.find("%d", found + 1) == string::npos,
685 "Since N_slices is specified, the filename provided for function "
686 "'BaseFlow' must include exactly one instance of the format "
687 "specifier '%d', to index the time-slices.");
688 size_t nstart = m_start;
689 for (size_t i = nstart; i < nstart + m_slices * m_skip; i += m_skip)
690 {
691 boost::format filename(file);
692 filename % i;
693 ImportFldBase(filename.str(), pFields, (i - nstart) / m_skip);
694 if (m_session->GetComm()->GetRank() == 0)
695 {
696 cout << "read base flow file " << filename.str() << endl;
697 }
698 }
699 if (!m_isperiodic)
700 {
701 return;
702 }
703
704 // Discrete Fourier Transform of the fields
705 for (size_t k = 0; k < ConvectedFields; ++k)
706 {
707#ifdef NEKTAR_USING_FFTW
708
709 // Discrete Fourier Transform using FFTW
710 Array<OneD, NekDouble> fft_in(npoints * m_slices);
711 Array<OneD, NekDouble> fft_out(npoints * m_slices);
712
713 Array<OneD, NekDouble> m_tmpIN(m_slices);
714 Array<OneD, NekDouble> m_tmpOUT(m_slices);
715
716 // Shuffle the data
717 for (int j = 0; j < m_slices; ++j)
718 {
719 Vmath::Vcopy(npoints, &m_interp[k][j * npoints], 1, &(fft_in[j]),
720 m_slices);
721 }
722
724 m_slices);
725
726 // FFT Transform
727 for (size_t i = 0; i < npoints; i++)
728 {
729 m_FFT->FFTFwdTrans(m_tmpIN = fft_in + i * m_slices,
730 m_tmpOUT = fft_out + i * m_slices);
731 }
732
733 // Reshuffle data
734 for (int s = 0; s < m_slices; ++s)
735 {
736 Vmath::Vcopy(npoints, &fft_out[s], m_slices,
737 &m_interp[k][s * npoints], 1);
738 }
739
740 Vmath::Zero(fft_in.size(), &fft_in[0], 1);
741 Vmath::Zero(fft_out.size(), &fft_out[0], 1);
742#else
743 // Discrete Fourier Transform using MVM
744 DNekBlkMatSharedPtr blkmat;
746
747 int nrows = blkmat->GetRows();
748 int ncols = blkmat->GetColumns();
749
750 Array<OneD, NekDouble> sortedinarray(ncols);
751 Array<OneD, NekDouble> sortedoutarray(nrows);
752
753 // Shuffle the data
754 for (int j = 0; j < m_slices; ++j)
755 {
756 Vmath::Vcopy(npoints, &m_interp[k][j * npoints], 1,
757 &(sortedinarray[j]), m_slices);
758 }
759
760 // Create NekVectors from the given data arrays
761 NekVector<NekDouble> in(ncols, sortedinarray, eWrapper);
762 NekVector<NekDouble> out(nrows, sortedoutarray, eWrapper);
763
764 // Perform matrix-vector multiply.
765 out = (*blkmat) * in;
766
767 // Reshuffle data
768 for (int s = 0; s < m_slices; ++s)
769 {
770 Vmath::Vcopy(npoints, &sortedoutarray[s], m_slices,
771 &m_interp[k][s * npoints], 1);
772 }
773
774 for (size_t r = 0; r < sortedinarray.size(); ++r)
775 {
776 sortedinarray[0] = 0;
777 sortedoutarray[0] = 0;
778 }
779
780#endif
781 }
782}
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:208
tBaseSharedPtr CreateInstance(tKey idKey, tParam... args)
Create an instance of the class referred to by idKey.
Definition: NekFactory.hpp:143
LibUtilities::SessionReaderSharedPtr m_session
Array< OneD, NekDouble > m_tmpIN
DNekBlkMatSharedPtr GetFloquetBlockMatrix(FloquetMatType mattype, bool UseContCoeffs=false) const
Array< OneD, Array< OneD, NekDouble > > m_baseflow
Storage for base flow.
Array< OneD, NekDouble > m_tmpOUT
LibUtilities::NektarFFTSharedPtr m_FFT
auxiliary variables
void ImportFldBase(std::string pInfile, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, int slice)
Import Base flow.
Array< OneD, Array< OneD, NekDouble > > m_interp
interpolation vector
NektarFFTFactory & GetNektarFFTFactory()
Definition: NektarFFT.cpp:65
std::shared_ptr< DNekBlkMat > DNekBlkMatSharedPtr
Definition: NekTypeDefs.hpp:77
void Zero(int n, T *x, const int incx)
Zero vector.
Definition: Vmath.hpp:273
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.hpp:825

References ASSERTL0, Nektar::LibUtilities::NekFactory< tKey, tBase, tParam >::CreateInstance(), eForwardsPhys, Nektar::eWrapper, CellMLToNektar.pycml::format, GetFloquetBlockMatrix(), Nektar::LibUtilities::GetNektarFFTFactory(), ImportFldBase(), m_baseflow, m_FFT, m_interp, m_isperiodic, m_session, m_skip, m_slices, m_start, m_tmpIN, m_tmpOUT, Vmath::Vcopy(), and Vmath::Zero().

Referenced by v_InitObject().

◆ GenFloquetBlockMatrix()

DNekBlkMatSharedPtr Nektar::LinearisedAdvection::GenFloquetBlockMatrix ( FloquetMatType  mattype,
bool  UseContCoeffs = false 
) const
protected

◆ GetFloquetBlockMatrix()

DNekBlkMatSharedPtr Nektar::LinearisedAdvection::GetFloquetBlockMatrix ( FloquetMatType  mattype,
bool  UseContCoeffs = false 
) const
protected

Definition at line 627 of file LinearisedAdvection.cpp.

630{
631 DNekMatSharedPtr loc_mat;
632 DNekBlkMatSharedPtr BlkMatrix;
633 size_t n_exp = 0;
634
635 n_exp = m_baseflow[0].size(); // will operatore on m_phys
636
637 Array<OneD, unsigned int> nrows(n_exp);
638 Array<OneD, unsigned int> ncols(n_exp);
639
640 nrows = Array<OneD, unsigned int>(n_exp, m_slices);
641 ncols = Array<OneD, unsigned int>(n_exp, m_slices);
642
643 MatrixStorage blkmatStorage = eDIAGONAL;
644 BlkMatrix = MemoryManager<DNekBlkMat>::AllocateSharedPtr(nrows, ncols,
645 blkmatStorage);
646
647 const LibUtilities::PointsKey Pkey(m_slices,
649 const LibUtilities::BasisKey BK(LibUtilities::eFourier, m_slices, Pkey);
650 StdRegions::StdSegExp StdSeg(BK);
651
652 StdRegions::StdMatrixKey matkey(StdRegions::eFwdTrans,
653 StdSeg.DetShapeType(), StdSeg);
654
655 loc_mat = StdSeg.GetStdMatrix(matkey);
656
657 // set up array of block matrices.
658 for (size_t i = 0; i < n_exp; ++i)
659 {
660 BlkMatrix->SetBlock(i, i, loc_mat);
661 }
662
663 return BlkMatrix;
664}
@ eFourierEvenlySpaced
1D Evenly-spaced points using Fourier Fit
Definition: PointsType.h:74
@ eFourier
Fourier Expansion .
Definition: BasisType.h:55
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:75

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::StdRegions::StdExpansion::DetShapeType(), Nektar::eDIAGONAL, Nektar::LibUtilities::eFourier, Nektar::LibUtilities::eFourierEvenlySpaced, Nektar::StdRegions::eFwdTrans, Nektar::StdRegions::StdExpansion::GetStdMatrix(), m_baseflow, and m_slices.

Referenced by DFT().

◆ ImportFldBase()

void Nektar::LinearisedAdvection::ImportFldBase ( std::string  pInfile,
Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields,
int  pSlice 
)
protected

Import Base flow.

Import field from infile and load into m_fields. This routine will also perform a BwdTrans to ensure data is in both the physical and coefficient storage.

Parameters
pInFileFilename to read.
pFieldsArray of expansion lists

Definition at line 416 of file LinearisedAdvection.cpp.

419{
420 std::vector<LibUtilities::FieldDefinitionsSharedPtr> FieldDef;
421 std::vector<std::vector<NekDouble>> FieldData;
422
423 size_t nqtot = m_baseflow[0].size();
424 Array<OneD, NekDouble> tmp_coeff(pFields[0]->GetNcoeffs(), 0.0);
425
426 size_t numexp = pFields[0]->GetExpSize();
427 Array<OneD, int> ElementGIDs(numexp);
428
429 // Define list of global element ids
430 for (size_t i = 0; i < numexp; ++i)
431 {
432 ElementGIDs[i] = pFields[0]->GetExp(i)->GetGeom()->GetGlobalID();
433 }
434
435 // Get Homogeneous
438 fld->Import(pInfile, FieldDef, FieldData,
440
441 size_t nSessionVar = m_session->GetVariables().size();
442 size_t nSessionConvVar = nSessionVar - 1;
443 size_t nFileVar = FieldDef[0]->m_fields.size();
444
445 std::unordered_map<int, int> zIdToPlane;
447 {
448 zIdToPlane[0] = 0;
449 }
450
451 for (size_t j = 0; j < nFileVar; ++j)
452 {
453 size_t k = 0;
454 for (; k < nSessionConvVar; ++k)
455 {
456 if (m_session->GetVariable(k) == FieldDef[0]->m_fields[j])
457 {
458 break;
459 }
460 }
461 if (k == nSessionConvVar)
462 {
463 continue;
464 }
465 for (size_t i = 0; i < FieldDef.size(); ++i)
466 {
467 pFields[j]->ExtractDataToCoeffs(FieldDef[i], FieldData[i],
468 FieldDef[i]->m_fields[j], tmp_coeff,
469 zIdToPlane);
470 }
471
473 {
474 pFields[j]->GetPlane(0)->BwdTrans(tmp_coeff, m_baseflow[k]);
475
476 if (m_singleMode)
477 {
478 // copy the bwd trans into the second plane for single
479 // Mode Analysis
480 int ncplane = (pFields[0]->GetNpoints()) / m_npointsZ;
481 Vmath::Vcopy(ncplane, &m_baseflow[k][0], 1,
482 &m_baseflow[k][ncplane], 1);
483 }
484 }
485 else // fully 3D base flow - put in physical space.
486 {
487 bool oldwavespace = pFields[j]->GetWaveSpace();
488 pFields[j]->SetWaveSpace(false);
489 pFields[j]->BwdTrans(tmp_coeff, m_baseflow[k]);
490 pFields[j]->SetWaveSpace(oldwavespace);
491 }
492 }
493
494 // If time-periodic, put loaded data into the slice storage.
495 if (m_slices > 1)
496 {
497 for (size_t i = 0; i < nSessionConvVar; ++i)
498 {
499 Vmath::Vcopy(nqtot, &m_baseflow[i][0], 1,
500 &m_interp[i][pSlice * nqtot], 1);
501 }
502 }
503}
static std::shared_ptr< FieldIO > CreateForFile(const LibUtilities::SessionReaderSharedPtr session, const std::string &filename)
Construct a FieldIO object for a given input filename.
Definition: FieldIO.cpp:224
int m_npointsZ
number of points in Z direction (if homogeneous)
bool m_singleMode
flag to determine if use single mode or not
bool m_halfMode
flag to determine if use half mode or not
std::shared_ptr< FieldIO > FieldIOSharedPtr
Definition: FieldIO.h:322
static FieldMetaDataMap NullFieldMetaDataMap
Definition: FieldIO.h:51

References Nektar::LibUtilities::FieldIO::CreateForFile(), m_baseflow, m_halfMode, m_interp, m_npointsZ, m_session, m_singleMode, m_slices, Nektar::LibUtilities::NullFieldMetaDataMap, and Vmath::Vcopy().

Referenced by DFT(), and v_InitObject().

◆ UpdateBase()

void Nektar::LinearisedAdvection::UpdateBase ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray,
const NekDouble  time 
)
protected

Definition at line 505 of file LinearisedAdvection.cpp.

508{
509 int npoints = m_baseflow[0].size();
510 if (m_isperiodic)
511 {
512 NekDouble BetaT = 2 * M_PI * fmod(time, m_period) / m_period;
513 NekDouble phase;
514 Array<OneD, NekDouble> auxiliary(npoints);
515
516 Vmath::Vcopy(npoints, &inarray[0], 1, &outarray[0], 1);
517 Vmath::Svtvp(npoints, cos(0.5 * m_slices * BetaT), &inarray[npoints], 1,
518 &outarray[0], 1, &outarray[0], 1);
519
520 for (int i = 2; i < m_slices; i += 2)
521 {
522 phase = (i >> 1) * BetaT;
523
524 Vmath::Svtvp(npoints, cos(phase), &inarray[i * npoints], 1,
525 &outarray[0], 1, &outarray[0], 1);
526 Vmath::Svtvp(npoints, -sin(phase), &inarray[(i + 1) * npoints], 1,
527 &outarray[0], 1, &outarray[0], 1);
528 }
529 }
530 else
531 {
532 NekDouble x = time;
533 x = x / m_period * (m_slices - 1);
534 int ix = x;
535 if (ix < 0)
536 {
537 ix = 0;
538 }
539 if (ix > m_slices - 2)
540 {
541 ix = m_slices - 2;
542 }
543 int padleft = m_interporder / 2 - 1;
544 if (padleft > ix)
545 {
546 padleft = ix;
547 }
548 int padright = m_interporder - 1 - padleft;
549 if (padright > m_slices - 1 - ix)
550 {
551 padright = m_slices - 1 - ix;
552 }
553 padleft = m_interporder - 1 - padright;
554 Array<OneD, NekDouble> coeff(m_interporder, 1.);
555 for (int i = 0; i < m_interporder; ++i)
556 {
557 for (int j = 0; j < m_interporder; ++j)
558 {
559 if (i != j)
560 {
561 coeff[i] *= (x - ix + padleft - (NekDouble)j) /
562 ((NekDouble)i - (NekDouble)j);
563 }
564 }
565 }
566 Vmath::Zero(npoints, &outarray[0], 1);
567 for (int i = ix - padleft; i < ix + padright + 1; ++i)
568 {
569 Vmath::Svtvp(npoints, coeff[i - ix + padleft],
570 &inarray[i * npoints], 1, &outarray[0], 1,
571 &outarray[0], 1);
572 }
573 }
574}
NekDouble m_period
period length
double NekDouble
void Svtvp(int n, const T alpha, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Svtvp (scalar times vector plus vector): z = alpha*x + y.
Definition: Vmath.hpp:396

References m_baseflow, m_interporder, m_isperiodic, m_period, m_slices, Vmath::Svtvp(), Vmath::Vcopy(), and Vmath::Zero().

Referenced by Nektar::AdjointAdvection::v_Advect(), and v_Advect().

◆ UpdateGradBase()

void Nektar::LinearisedAdvection::UpdateGradBase ( const int  var,
const MultiRegions::ExpListSharedPtr field 
)
protected

Definition at line 576 of file LinearisedAdvection.cpp.

578{
579 int nBaseDerivs = (m_halfMode || m_singleMode) ? 2 : m_spacedim;
580 switch (m_spacedim)
581 {
582 case 1: // 1D
583 {
584 field->PhysDeriv(m_baseflow[var],
585 m_gradBase[var * nBaseDerivs + 0]);
586 }
587 break;
588 case 2: // 2D
589 {
590 field->PhysDeriv(m_baseflow[var], m_gradBase[var * nBaseDerivs + 0],
591 m_gradBase[var * nBaseDerivs + 1]);
592 }
593 break;
594 case 3:
595 {
596 if (m_halfMode) // can assume W = 0 and d/dz == 0
597 {
598 if (var < 2)
599 {
600 field->PhysDeriv(m_baseflow[var],
601 m_gradBase[var * nBaseDerivs + 0],
602 m_gradBase[var * nBaseDerivs + 1]);
603 }
604 }
605 else if (m_singleMode) // single mode where d/dz = 0
606 {
607 field->PhysDeriv(m_baseflow[var],
608 m_gradBase[var * nBaseDerivs + 0],
609 m_gradBase[var * nBaseDerivs + 1]);
610 }
611 else
612 {
613 // Differentiate base flow in physical space
614 bool oldwavespace = field->GetWaveSpace();
615 field->SetWaveSpace(false);
616 field->PhysDeriv(m_baseflow[var],
617 m_gradBase[var * nBaseDerivs + 0],
618 m_gradBase[var * nBaseDerivs + 1],
619 m_gradBase[var * nBaseDerivs + 2]);
620 field->SetWaveSpace(oldwavespace);
621 }
622 }
623 break;
624 }
625}
Array< OneD, Array< OneD, NekDouble > > m_gradBase

References m_baseflow, m_gradBase, m_halfMode, m_singleMode, and m_spacedim.

Referenced by Nektar::AdjointAdvection::v_Advect(), v_Advect(), v_InitObject(), and v_SetBaseFlow().

◆ v_Advect()

void Nektar::LinearisedAdvection::v_Advect ( const int  nConvectiveFields,
const Array< OneD, MultiRegions::ExpListSharedPtr > &  fields,
const Array< OneD, Array< OneD, NekDouble > > &  advVel,
const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray,
const NekDouble time,
const Array< OneD, Array< OneD, NekDouble > > &  pFwd = NullNekDoubleArrayOfArray,
const Array< OneD, Array< OneD, NekDouble > > &  pBwd = NullNekDoubleArrayOfArray 
)
overrideprotectedvirtual

Advects a vector field.

Implements Nektar::SolverUtils::Advection.

Definition at line 270 of file LinearisedAdvection.cpp.

278{
279 ASSERTL1(nConvectiveFields == inarray.size(),
280 "Number of convective fields and Inarray are not compatible");
281
282 size_t nPointsTot = fields[0]->GetNpoints();
283 size_t ndim = advVel.size();
284 size_t nBaseDerivs = (m_halfMode || m_singleMode) ? 2 : m_spacedim;
285 size_t nDerivs = (m_halfMode) ? 2 : m_spacedim;
286
287 Array<OneD, Array<OneD, NekDouble>> velocity(ndim);
288 for (size_t i = 0; i < ndim; ++i)
289 {
290 if (fields[i]->GetWaveSpace() && !m_singleMode && !m_halfMode)
291 {
292 velocity[i] = Array<OneD, NekDouble>(nPointsTot, 0.0);
293 fields[i]->HomogeneousBwdTrans(nPointsTot, advVel[i], velocity[i]);
294 }
295 else
296 {
297 velocity[i] = advVel[i];
298 }
299 }
300
301 Array<OneD, Array<OneD, NekDouble>> grad(nDerivs);
302 for (size_t i = 0; i < nDerivs; ++i)
303 {
304 grad[i] = Array<OneD, NekDouble>(nPointsTot);
305 }
306
307 // Evaluation of the base flow for periodic cases
308 if (m_slices > 1)
309 {
310 for (size_t i = 0; i < ndim; ++i)
311 {
312 UpdateBase(m_interp[i], m_baseflow[i], time);
313 UpdateGradBase(i, fields[i]);
314 }
315 }
316
317 // Evaluate the linearised advection term
318 for (size_t i = 0; i < (size_t)nConvectiveFields; ++i)
319 {
320 // Calculate gradient
321 switch (nDerivs)
322 {
323 case 1:
324 {
325 fields[i]->PhysDeriv(inarray[i], grad[0]);
326 }
327 break;
328 case 2:
329 {
330 fields[i]->PhysDeriv(inarray[i], grad[0], grad[1]);
331 }
332 break;
333 case 3:
334 {
335 fields[i]->PhysDeriv(inarray[i], grad[0], grad[1], grad[2]);
336 if (m_multipleModes)
337 {
338 // transform gradients into physical Fourier space
339 fields[i]->HomogeneousBwdTrans(nPointsTot, grad[0],
340 grad[0]);
341 fields[i]->HomogeneousBwdTrans(nPointsTot, grad[1],
342 grad[1]);
343 fields[i]->HomogeneousBwdTrans(nPointsTot, grad[2],
344 grad[2]);
345 }
346 }
347 break;
348 }
349
350 // Calculate U_j du'_i/dx_j
351 Vmath::Vmul(nPointsTot, grad[0], 1, m_baseflow[0], 1, outarray[i], 1);
352 for (size_t j = 1; j < nDerivs; ++j)
353 {
354 Vmath::Vvtvp(nPointsTot, grad[j], 1, m_baseflow[j], 1, outarray[i],
355 1, outarray[i], 1);
356 }
357
358 // Add u'_j dU_i/dx_j
359 size_t lim = (m_halfMode || m_singleMode) ? 2 : ndim;
360 if (m_halfMode && i == 2)
361 {
362 lim = 0;
363 }
364 for (size_t j = 0; j < lim; ++j)
365 {
366 Vmath::Vvtvp(nPointsTot, m_gradBase[i * nBaseDerivs + j], 1,
367 velocity[j], 1, outarray[i], 1, outarray[i], 1);
368 }
369
370 if (m_multipleModes)
371 {
372 fields[i]->HomogeneousFwdTrans(nPointsTot, outarray[i],
373 outarray[i]);
374 }
375 Vmath::Neg(nPointsTot, outarray[i], 1);
376 }
377}
#define ASSERTL1(condition, msg)
Assert Level 1 – Debugging which is used whether in FULLDEBUG or DEBUG compilation mode....
Definition: ErrorUtil.hpp:242
void UpdateBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble time)
void UpdateGradBase(const int var, const MultiRegions::ExpListSharedPtr &field)
bool m_multipleModes
flag to determine if use multiple mode or not
const std::vector< NekDouble > velocity
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.hpp:72
void Neg(int n, T *x, const int incx)
Negate x = -x.
Definition: Vmath.hpp:292
void Vvtvp(int n, const T *w, const int incw, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
vvtvp (vector times vector plus vector): z = w*x + y
Definition: Vmath.hpp:366

References ASSERTL1, m_baseflow, m_gradBase, m_halfMode, m_interp, m_multipleModes, m_singleMode, m_slices, m_spacedim, Vmath::Neg(), UpdateBase(), UpdateGradBase(), Nektar::MovementTests::velocity, Vmath::Vmul(), and Vmath::Vvtvp().

◆ v_InitObject()

void Nektar::LinearisedAdvection::v_InitObject ( LibUtilities::SessionReaderSharedPtr  pSession,
Array< OneD, MultiRegions::ExpListSharedPtr pFields 
)
overrideprotectedvirtual

Initialises the advection object.

This function should be overridden in derived classes to initialise the specific advection data members. However, this base class function should be called as the first statement of the overridden function to ensure the base class is correctly initialised in order.

Parameters
pSessionSession information.
pFieldsExpansion lists for scalar fields.

Reimplemented from Nektar::SolverUtils::Advection.

Definition at line 59 of file LinearisedAdvection.cpp.

62{
63 Advection::v_InitObject(pSession, pFields);
64
65 m_session = pSession;
68 m_session, pFields[0]->GetGraph());
69 m_spacedim = pFields[0]->GetGraph()->GetSpaceDimension();
70 m_expdim = pFields[0]->GetGraph()->GetMeshDimension();
71
72 // Setting parameters for homogeneous problems
73 m_HomoDirec = 0;
74 m_useFFT = false;
76 m_singleMode = false;
77 m_halfMode = false;
78 m_multipleModes = false;
79
80 if (m_session->DefinesSolverInfo("HOMOGENEOUS"))
81 {
82 std::string HomoStr = m_session->GetSolverInfo("HOMOGENEOUS");
83 m_spacedim = 3;
84
85 if ((HomoStr == "HOMOGENEOUS1D") || (HomoStr == "Homogeneous1D") ||
86 (HomoStr == "1D") || (HomoStr == "Homo1D"))
87 {
89 m_LhomZ = m_session->GetParameter("LZ");
90 m_HomoDirec = 1;
91
92 ASSERTL0(m_session->DefinesSolverInfo("ModeType"),
93 "Need to specify ModeType as HalfMode,SingleMode or "
94 "MultipleModes");
95
96 m_session->MatchSolverInfo("ModeType", "SingleMode", m_singleMode,
97 false);
98 m_session->MatchSolverInfo("ModeType", "HalfMode", m_halfMode,
99 false);
100 m_session->MatchSolverInfo("ModeType", "MultipleModes",
101 m_multipleModes, false);
102
103 if (m_singleMode)
104 {
105 m_npointsZ = 2;
106 }
107 else if (m_halfMode)
108 {
109 m_npointsZ = 1;
110 }
111 else if (m_multipleModes)
112 {
113 m_npointsZ = m_session->GetParameter("HomModesZ");
114 }
115 }
116
117 if ((HomoStr == "HOMOGENEOUS2D") || (HomoStr == "Homogeneous2D") ||
118 (HomoStr == "2D") || (HomoStr == "Homo2D"))
119 {
121 m_session->LoadParameter("HomModesY", m_npointsY);
122 m_session->LoadParameter("LY", m_LhomY);
123 m_session->LoadParameter("HomModesZ", m_npointsZ);
124 m_session->LoadParameter("LZ", m_LhomZ);
125 m_HomoDirec = 2;
126 }
127
128 if ((HomoStr == "HOMOGENEOUS3D") || (HomoStr == "Homogeneous3D") ||
129 (HomoStr == "3D") || (HomoStr == "Homo3D"))
130 {
132 m_session->LoadParameter("HomModesX", m_npointsX);
133 m_session->LoadParameter("LX", m_LhomX);
134 m_session->LoadParameter("HomModesY", m_npointsY);
135 m_session->LoadParameter("LY", m_LhomY);
136 m_session->LoadParameter("HomModesZ", m_npointsZ);
137 m_session->LoadParameter("LZ", m_LhomZ);
138 m_HomoDirec = 3;
139 }
140
141 if (m_session->DefinesSolverInfo("USEFFT"))
142 {
143 m_useFFT = true;
144 }
145 }
146 else
147 {
148 m_npointsZ = 1; // set to default value so can use to identify 2d or 3D
149 // (homogeneous) expansions
150 }
151
152 size_t nvar = m_session->GetVariables().size();
153 m_baseflow = Array<OneD, Array<OneD, NekDouble>>(nvar);
154 for (size_t i = 0; i < nvar; ++i)
155 {
156 m_baseflow[i] = Array<OneD, NekDouble>(pFields[i]->GetTotPoints(), 0.0);
157 }
158
159 size_t nBaseDerivs = (m_halfMode || m_singleMode) ? 2 : m_spacedim;
160 m_gradBase = Array<OneD, Array<OneD, NekDouble>>(nvar * nBaseDerivs);
161 for (size_t i = 0; i < nvar; ++i)
162 {
163 for (size_t j = 0; j < nBaseDerivs; ++j)
164 {
165 m_gradBase[i * nBaseDerivs + j] =
166 Array<OneD, NekDouble>(pFields[i]->GetTotPoints(), 0.0);
167 }
168 }
169
170 ASSERTL0(m_session->DefinesFunction("BaseFlow"),
171 "Base flow must be defined for linearised forms.");
172 string file = m_session->GetFunctionFilename("BaseFlow", 0);
173
174 // Periodic base flows
175 if (m_session->DefinesParameter("N_slices"))
176 {
177 m_session->LoadParameter("N_slices", m_slices);
178 if (m_slices > 1)
179 {
180 ASSERTL0(m_session->GetFunctionType("BaseFlow", 0) ==
182 "Base flow should be a sequence of files.");
183 m_session->LoadParameter("BaseFlow_interporder", m_interporder, 0);
185 "BaseFlow_interporder should be smaller than or equal to "
186 "N_slices.");
188 m_session->LoadParameter("N_start", m_start, 0);
189 m_session->LoadParameter("N_skip", m_skip, 1);
190 DFT(file, pFields);
191 }
192 else
193 {
194 ASSERTL0(false, "Number of slices must be a positive number "
195 "greater than 1");
196 }
197 }
198 // Steady base-flow
199 else
200 {
201 m_slices = 1;
202
203 // BaseFlow from file
204 if (m_session->GetFunctionType("BaseFlow", m_session->GetVariable(0)) ==
206 {
207 ImportFldBase(file, pFields, 1);
208 }
209 // analytic base flow
210 else
211 {
212 size_t nq = pFields[0]->GetNpoints();
213 Array<OneD, NekDouble> x0(nq);
214 Array<OneD, NekDouble> x1(nq);
215 Array<OneD, NekDouble> x2(nq);
216
217 // get the coordinates (assuming all fields have the same
218 // discretisation)
219 pFields[0]->GetCoords(x0, x1, x2);
220
221 for (size_t i = 0; i < pFields.size(); i++)
222 {
224 m_session->GetFunction("BaseFlow", i);
225
226 ifunc->Evaluate(x0, x1, x2, m_baseflow[i]);
227 }
228 }
229 }
230
231 for (size_t i = 0; i < nvar; ++i)
232 {
233 UpdateGradBase(i, pFields[i]);
234 }
235
236 if (m_session->DefinesParameter("period"))
237 {
238 m_period = m_session->GetParameter("period");
239 }
240 else
241 {
242 m_period =
243 (m_session->GetParameter("TimeStep") * m_slices) / (m_slices - 1.);
244 }
245 if (m_session->GetComm()->GetRank() == 0)
246 {
247 cout << "baseflow info : interpolation order " << m_interporder
248 << ", period " << m_period << ", periodicity ";
249 if (m_isperiodic)
250 {
251 cout << "yes\n";
252 }
253 else
254 {
255 cout << "no\n";
256 }
257 cout << "baseflow info : files from " << m_start << " to "
258 << (m_start + (m_slices - 1) * m_skip) << " (skip " << m_skip
259 << ") with " << (m_slices - (m_interporder > 1))
260 << " time intervals" << endl;
261 }
262}
SpatialDomains::BoundaryConditionsSharedPtr m_boundaryConditions
NekDouble m_LhomZ
physical length in Z direction (if homogeneous)
enum HomogeneousType m_HomogeneousType
int m_npointsX
number of points in X direction (if homogeneous)
int m_npointsY
number of points in Y direction (if homogeneous)
int m_HomoDirec
number of homogenous directions
bool m_useFFT
flag to determine if use or not the FFT for transformations
void DFT(const std::string file, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
NekDouble m_LhomY
physical length in Y direction (if homogeneous)
NekDouble m_LhomX
physical length in X direction (if homogeneous)
virtual SOLVER_UTILS_EXPORT void v_InitObject(LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields)
Initialises the advection object.
Definition: Advection.cpp:295
std::shared_ptr< Equation > EquationSharedPtr
Definition: Equation.h:125

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, DFT(), Nektar::LibUtilities::eFunctionTypeFile, eHomogeneous1D, eHomogeneous2D, eHomogeneous3D, eNotHomogeneous, ImportFldBase(), m_baseflow, m_boundaryConditions, m_expdim, m_gradBase, m_halfMode, m_HomoDirec, m_HomogeneousType, m_interporder, m_isperiodic, m_LhomX, m_LhomY, m_LhomZ, m_multipleModes, m_npointsX, m_npointsY, m_npointsZ, m_period, m_session, m_singleMode, m_skip, m_slices, m_spacedim, m_start, m_useFFT, UpdateGradBase(), and Nektar::SolverUtils::Advection::v_InitObject().

◆ v_SetBaseFlow()

void Nektar::LinearisedAdvection::v_SetBaseFlow ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
const Array< OneD, MultiRegions::ExpListSharedPtr > &  fields 
)
overrideprotectedvirtual

Overrides the base flow used during linearised advection.

Reimplemented from Nektar::SolverUtils::Advection.

Definition at line 379 of file LinearisedAdvection.cpp.

382{
383 if (m_session->GetSolverInfo("EqType") == "UnsteadyNavierStokes")
384 {
385 // The SFD method is only applied to the velocity variables in
386 // incompressible
387 ASSERTL1(inarray.size() == (m_baseflow.size() - 1),
388 "Number of base flow variables does not match what is "
389 "expected.");
390 }
391 else
392 {
393 ASSERTL1(
394 inarray.size() == (m_baseflow.size()),
395 "Number of base flow variables does not match what is expected.");
396 }
397
398 size_t npts = inarray[0].size();
399
400 for (size_t i = 0; i < inarray.size(); ++i)
401 {
402 ASSERTL1(npts == m_baseflow[i].size(),
403 "Size of base flow array does not match expected.");
404 Vmath::Vcopy(npts, inarray[i], 1, m_baseflow[i], 1);
405 UpdateGradBase(i, fields[i]);
406 }
407}

References ASSERTL1, m_baseflow, m_session, UpdateGradBase(), and Vmath::Vcopy().

Friends And Related Function Documentation

◆ MemoryManager< LinearisedAdvection >

friend class MemoryManager< LinearisedAdvection >
friend

Definition at line 56 of file LinearisedAdvection.h.

Member Data Documentation

◆ className

string Nektar::LinearisedAdvection::className
static
Initial value:
=
"Linearised Non-Conservative")
tKey RegisterCreatorFunction(tKey idKey, CreatorFunction classCreator, std::string pDesc="")
Register a class with the factory.
Definition: NekFactory.hpp:197
static SolverUtils::AdvectionSharedPtr create(std::string)
Creates an instance of this class.
AdvectionFactory & GetAdvectionFactory()
Gets the factory for initialising advection objects.
Definition: Advection.cpp:43

Name of class.

Definition at line 67 of file LinearisedAdvection.h.

◆ m_baseflow

Array<OneD, Array<OneD, NekDouble> > Nektar::LinearisedAdvection::m_baseflow
protected

◆ m_boundaryConditions

SpatialDomains::BoundaryConditionsSharedPtr Nektar::LinearisedAdvection::m_boundaryConditions
private

Definition at line 171 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_expdim

int Nektar::LinearisedAdvection::m_expdim
protected

Definition at line 73 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_FFT

LibUtilities::NektarFFTSharedPtr Nektar::LinearisedAdvection::m_FFT
protected

auxiliary variables

Definition at line 90 of file LinearisedAdvection.h.

Referenced by DFT().

◆ m_FloquetBlockMat

FloquetBlockMatrixMapShPtr Nektar::LinearisedAdvection::m_FloquetBlockMat
protected

Definition at line 105 of file LinearisedAdvection.h.

◆ m_gradBase

Array<OneD, Array<OneD, NekDouble> > Nektar::LinearisedAdvection::m_gradBase
protected

◆ m_halfMode

bool Nektar::LinearisedAdvection::m_halfMode
protected

flag to determine if use half mode or not

Definition at line 97 of file LinearisedAdvection.h.

Referenced by ImportFldBase(), UpdateGradBase(), Nektar::AdjointAdvection::v_Advect(), v_Advect(), and v_InitObject().

◆ m_HomoDirec

int Nektar::LinearisedAdvection::m_HomoDirec
private

number of homogenous directions

Definition at line 167 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_HomogeneousType

enum HomogeneousType Nektar::LinearisedAdvection::m_HomogeneousType
private

Definition at line 157 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_interp

Array<OneD, Array<OneD, NekDouble> > Nektar::LinearisedAdvection::m_interp
protected

interpolation vector

Definition at line 88 of file LinearisedAdvection.h.

Referenced by DFT(), ImportFldBase(), Nektar::AdjointAdvection::v_Advect(), and v_Advect().

◆ m_interporder

int Nektar::LinearisedAdvection::m_interporder
protected

Definition at line 86 of file LinearisedAdvection.h.

Referenced by UpdateBase(), and v_InitObject().

◆ m_isperiodic

int Nektar::LinearisedAdvection::m_isperiodic
protected

Definition at line 85 of file LinearisedAdvection.h.

Referenced by DFT(), UpdateBase(), and v_InitObject().

◆ m_LhomX

NekDouble Nektar::LinearisedAdvection::m_LhomX
private

physical length in X direction (if homogeneous)

Definition at line 159 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_LhomY

NekDouble Nektar::LinearisedAdvection::m_LhomY
private

physical length in Y direction (if homogeneous)

Definition at line 160 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_LhomZ

NekDouble Nektar::LinearisedAdvection::m_LhomZ
private

physical length in Z direction (if homogeneous)

Definition at line 161 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_multipleModes

bool Nektar::LinearisedAdvection::m_multipleModes
protected

flag to determine if use multiple mode or not

Definition at line 99 of file LinearisedAdvection.h.

Referenced by Nektar::AdjointAdvection::v_Advect(), v_Advect(), and v_InitObject().

◆ m_npointsX

int Nektar::LinearisedAdvection::m_npointsX
private

number of points in X direction (if homogeneous)

Definition at line 163 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_npointsY

int Nektar::LinearisedAdvection::m_npointsY
private

number of points in Y direction (if homogeneous)

Definition at line 164 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_npointsZ

int Nektar::LinearisedAdvection::m_npointsZ
private

number of points in Z direction (if homogeneous)

Definition at line 165 of file LinearisedAdvection.h.

Referenced by ImportFldBase(), and v_InitObject().

◆ m_NumMode

int Nektar::LinearisedAdvection::m_NumMode
private

Mode to use in case of single mode analysis.

Definition at line 169 of file LinearisedAdvection.h.

◆ m_period

NekDouble Nektar::LinearisedAdvection::m_period
protected

period length

Definition at line 84 of file LinearisedAdvection.h.

Referenced by UpdateBase(), Nektar::AdjointAdvection::v_Advect(), and v_InitObject().

◆ m_session

LibUtilities::SessionReaderSharedPtr Nektar::LinearisedAdvection::m_session
protected

Definition at line 70 of file LinearisedAdvection.h.

Referenced by DFT(), ImportFldBase(), v_InitObject(), and v_SetBaseFlow().

◆ m_singleMode

bool Nektar::LinearisedAdvection::m_singleMode
protected

flag to determine if use single mode or not

Definition at line 95 of file LinearisedAdvection.h.

Referenced by ImportFldBase(), UpdateGradBase(), Nektar::AdjointAdvection::v_Advect(), v_Advect(), and v_InitObject().

◆ m_skip

int Nektar::LinearisedAdvection::m_skip
protected

Definition at line 81 of file LinearisedAdvection.h.

Referenced by DFT(), and v_InitObject().

◆ m_slices

int Nektar::LinearisedAdvection::m_slices
protected

◆ m_spacedim

int Nektar::LinearisedAdvection::m_spacedim
protected

◆ m_start

int Nektar::LinearisedAdvection::m_start
protected

number of slices

Definition at line 80 of file LinearisedAdvection.h.

Referenced by DFT(), and v_InitObject().

◆ m_tmpIN

Array<OneD, NekDouble> Nektar::LinearisedAdvection::m_tmpIN
protected

Definition at line 91 of file LinearisedAdvection.h.

Referenced by DFT().

◆ m_tmpOUT

Array<OneD, NekDouble> Nektar::LinearisedAdvection::m_tmpOUT
protected

Definition at line 92 of file LinearisedAdvection.h.

Referenced by DFT().

◆ m_useFFT

bool Nektar::LinearisedAdvection::m_useFFT
private

flag to determine if use or not the FFT for transformations

Definition at line 155 of file LinearisedAdvection.h.

Referenced by v_InitObject().

◆ m_useFFTW

bool Nektar::LinearisedAdvection::m_useFFTW
protected

Definition at line 93 of file LinearisedAdvection.h.