Nektar++
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#include <DisContField3DHomogeneous2D.h>
Public Member Functions | |
DisContField3DHomogeneous2D () | |
DisContField3DHomogeneous2D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble lhom_y, const NekDouble lhom_z, const bool useFFT, const bool dealiasing) | |
DisContField3DHomogeneous2D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble lhom_y, const NekDouble lhom_z, const bool useFFT, const bool dealiasing, const SpatialDomains::MeshGraphSharedPtr &graph1D, const std::string &variable) | |
DisContField3DHomogeneous2D (const DisContField3DHomogeneous2D &In, const bool DeclareLinesSetCoeffPhys=true) | |
Copy constructor. | |
virtual | ~DisContField3DHomogeneous2D () |
Destructor. | |
void | SetupBoundaryConditions (const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble lhom_y, const NekDouble lhom_z, SpatialDomains::BoundaryConditions &bcs) |
void | EvaluateBoundaryConditions (const NekDouble time=0.0, const std::string varName="") |
const Array< OneD, const MultiRegions::ExpListSharedPtr > & | GetBndCondExpansions () |
const Array< OneD, const SpatialDomains::BoundaryConditionShPtr > & | GetBndConditions () |
boost::shared_ptr< ExpList > & | UpdateBndCondExpansion (int i) |
Array< OneD, SpatialDomains::BoundaryConditionShPtr > & | UpdateBndConditions () |
void | GetBoundaryToElmtMap (Array< OneD, int > &ElmtID, Array< OneD, int > &EdgeID) |
Set up a list of element ids and edge ids the link to the boundary conditions. | |
Public Member Functions inherited from Nektar::MultiRegions::ExpList3DHomogeneous2D | |
ExpList3DHomogeneous2D () | |
Default constructor. | |
ExpList3DHomogeneous2D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble lhom_y, const NekDouble lhom_z, const bool useFFT, const bool dealiasing) | |
ExpList3DHomogeneous2D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble lhom_y, const NekDouble lhom_z, const bool useFFT, const bool dealiasing, const SpatialDomains::MeshGraphSharedPtr &graph1D) | |
Sets up a list of local expansions based on an input mesh. | |
ExpList3DHomogeneous2D (const ExpList3DHomogeneous2D &In, const bool DeclareLinesSetCoeffPhys=true) | |
Copy constructor. | |
virtual | ~ExpList3DHomogeneous2D () |
Destructor. | |
void | GetCoords (Array< OneD, NekDouble > &coord_0, Array< OneD, NekDouble > &coord_1=NullNekDouble1DArray, Array< OneD, NekDouble > &coord_2=NullNekDouble1DArray) |
This function calculates the coordinates of all the elemental quadrature points . | |
void | GetCoords (const int eid, Array< OneD, NekDouble > &xc0, Array< OneD, NekDouble > &xc1, Array< OneD, NekDouble > &xc2) |
Public Member Functions inherited from Nektar::MultiRegions::ExpListHomogeneous2D | |
ExpListHomogeneous2D () | |
Default constructor. | |
ExpListHomogeneous2D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &HomoBasis_y, const LibUtilities::BasisKey &HomoBasis_z, const NekDouble ly, const NekDouble lz, const bool useFFT, const bool dealiasing) | |
ExpListHomogeneous2D (const ExpListHomogeneous2D &In) | |
Copy constructor. | |
virtual | ~ExpListHomogeneous2D () |
Destructor. | |
void | Homogeneous2DTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool IsForwards, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
void | HomogeneousFwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
void | HomogeneousBwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
void | DealiasedProd (const Array< OneD, NekDouble > &inarray1, const Array< OneD, NekDouble > &inarray2, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | SetPaddingBase (void) |
void | PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) |
This function discretely evaluates the derivative of a function on the domain consisting of all elements of the expansion. | |
void | PhysDeriv (Direction edir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
Public Member Functions inherited from Nektar::MultiRegions::ExpList | |
ExpList () | |
The default constructor. | |
ExpList (const LibUtilities::SessionReaderSharedPtr &pSession) | |
The default constructor. | |
ExpList (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::MeshGraphSharedPtr &pGraph) | |
The default constructor. | |
ExpList (const ExpList &in, const bool DeclareCoeffPhysArrays=true) | |
The copy constructor. | |
virtual | ~ExpList () |
The default destructor. | |
int | GetNcoeffs (void) const |
Returns the total number of local degrees of freedom . | |
int | GetNcoeffs (const int eid) const |
Returns the total number of local degrees of freedom for element eid. | |
ExpansionType | GetExpType (void) |
Returns the type of the expansion. | |
void | SetExpType (ExpansionType Type) |
Returns the type of the expansion. | |
int | EvalBasisNumModesMax (void) const |
Evaulates the maximum number of modes in the elemental basis order over all elements. | |
const Array< OneD, int > | EvalBasisNumModesMaxPerExp (void) const |
Returns the vector of the number of modes in the elemental basis order over all elements. | |
int | GetTotPoints (void) const |
Returns the total number of quadrature points m_npoints . | |
int | GetTotPoints (const int eid) const |
Returns the total number of quadrature points for eid's element . | |
int | GetNpoints (void) const |
Returns the total number of quadrature points m_npoints . | |
int | Get1DScaledTotPoints (const NekDouble scale) const |
Returns the total number of qudature points scaled by the factor scale on each 1D direction. | |
void | SetWaveSpace (const bool wavespace) |
Sets the wave space to the one of the possible configuration true or false. | |
void | SetModifiedBasis (const bool modbasis) |
Set Modified Basis for the stability analysis. | |
void | SetPhys (int i, NekDouble val) |
Set the i th value of m_phys to value val. | |
bool | GetWaveSpace (void) const |
This function returns the third direction expansion condition, which can be in wave space (coefficient) or not It is stored in the variable m_WaveSpace. | |
void | SetPhys (const Array< OneD, const NekDouble > &inarray) |
Fills the array m_phys. | |
void | SetPhysArray (Array< OneD, NekDouble > &inarray) |
Sets the array m_phys. | |
void | SetPhysState (const bool physState) |
This function manually sets whether the array of physical values (implemented as m_phys) is filled or not. | |
bool | GetPhysState (void) const |
This function indicates whether the array of physical values (implemented as m_phys) is filled or not. | |
NekDouble | PhysIntegral (void) |
This function integrates a function over the domain consisting of all the elements of the expansion. | |
NekDouble | PhysIntegral (const Array< OneD, const NekDouble > &inarray) |
This function integrates a function over the domain consisting of all the elements of the expansion. | |
void | IProductWRTBase_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function calculates the inner product of a function with respect to all {local} expansion modes . | |
void | IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function calculates the inner product of a function with respect to the derivative (in direction. | |
void | FwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally evaluates the forward transformation of a function onto the global spectral/hp expansion. | |
void | FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | MultiplyByElmtInvMass (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally mulplies the coefficient space of Sin my the elemental inverse of the mass matrix. | |
void | MultiplyByInvMassMatrix (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | SmoothField (Array< OneD, NekDouble > &field) |
Smooth a field across elements. | |
void | HelmSolve (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const FlagList &flags, const StdRegions::ConstFactorMap &factors, const StdRegions::VarCoeffMap &varcoeff=StdRegions::NullVarCoeffMap, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve helmholtz problem. | |
void | LinearAdvectionDiffusionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve Advection Diffusion Reaction. | |
void | LinearAdvectionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve Advection Diffusion Reaction. | |
void | FwdTrans_BndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | BwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally evaluates the backward transformation of the global spectral/hp element expansion. | |
void | BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | GetBCValues (Array< OneD, NekDouble > &BndVals, const Array< OneD, NekDouble > &TotField, int BndID) |
void | NormVectorIProductWRTBase (Array< OneD, const NekDouble > &V1, Array< OneD, const NekDouble > &V2, Array< OneD, NekDouble > &outarray, int BndID) |
void | ApplyGeomInfo () |
Apply geometry information to each expansion. | |
void | WriteTecplotHeader (std::ofstream &outfile, std::string var="") |
void | WriteTecplotZone (std::ofstream &outfile, int expansion=-1) |
void | WriteTecplotField (std::ofstream &outfile, int expansion=-1) |
void | WriteTecplotConnectivity (std::ofstream &outfile, int expansion=-1) |
void | WriteVtkHeader (std::ofstream &outfile) |
void | WriteVtkFooter (std::ofstream &outfile) |
void | WriteVtkPieceHeader (std::ofstream &outfile, int expansion) |
void | WriteVtkPieceFooter (std::ofstream &outfile, int expansion) |
void | WriteVtkPieceData (std::ofstream &outfile, int expansion, std::string var="v") |
int | GetCoordim (int eid) |
This function returns the dimension of the coordinates of the element eid. | |
void | SetCoeff (int i, NekDouble val) |
Set the i th coefficiient in m_coeffs to value val. | |
void | SetCoeffs (int i, NekDouble val) |
Set the i th coefficiient in m_coeffs to value val. | |
void | SetCoeffsArray (Array< OneD, NekDouble > &inarray) |
Set the m_coeffs array to inarray. | |
const Array< OneD, const NekDouble > & | GetCoeffs () const |
This function returns (a reference to) the array (implemented as m_coeffs) containing all local expansion coefficients. | |
void | ImposeDirichletConditions (Array< OneD, NekDouble > &outarray) |
Impose Dirichlet Boundary Conditions onto Array. | |
void | FillBndCondFromField (void) |
Fill Bnd Condition expansion from the values stored in expansion. | |
void | LocalToGlobal (void) |
Put the coefficients into global ordering using m_coeffs. | |
void | GlobalToLocal (void) |
Put the coefficients into local ordering and place in m_coeffs. | |
NekDouble | GetCoeff (int i) |
Get the i th value (coefficient) of m_coeffs. | |
NekDouble | GetCoeffs (int i) |
Get the i th value (coefficient) of m_coeffs. | |
const Array< OneD, const NekDouble > & | GetPhys () const |
This function returns (a reference to) the array (implemented as m_phys) containing the function evaluated at the quadrature points. | |
NekDouble | Linf (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
This function calculates the error of the global spectral/hp element approximation. | |
NekDouble | L2 (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
This function calculates the error with respect to soln of the global spectral/hp element approximation. | |
NekDouble | H1 (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
Calculates the error of the global spectral/hp element approximation. | |
NekDouble | Integral (const Array< OneD, const NekDouble > &inarray) |
Array< OneD, const NekDouble > | HomogeneousEnergy (void) |
This function calculates the energy associated with each one of the modesof a 3D homogeneous nD expansion. | |
void | SetHomo1DSpecVanVisc (Array< OneD, NekDouble > visc) |
This function sets the Spectral Vanishing Viscosity in homogeneous1D expansion. | |
Array< OneD, const unsigned int > | GetZIDs (void) |
This function returns a vector containing the wave numbers in z-direction associated with the 3D homogenous expansion. Required if a parellelisation is applied in the Fourier direction. | |
LibUtilities::TranspositionSharedPtr | GetTransposition (void) |
This function returns the transposition class associaed with the homogeneous expansion. | |
NekDouble | GetHomoLen (void) |
This function returns the Width of homogeneous direction associaed with the homogeneous expansion. | |
Array< OneD, const unsigned int > | GetYIDs (void) |
This function returns a vector containing the wave numbers in y-direction associated with the 3D homogenous expansion. Required if a parellelisation is applied in the Fourier direction. | |
void | PhysInterp1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function interpolates the physical space points in inarray to outarray using the same points defined in the expansion but where the number of points are rescaled by 1DScale. | |
void | PhysGalerkinProjection1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function Galerkin projects the physical space points in inarray to outarray where inarray is assumed to be defined in the expansion but where the number of points are rescaled by 1DScale. | |
int | GetExpSize (void) |
This function returns the number of elements in the expansion. | |
int | GetNumElmts (void) |
This function returns the number of elements in the expansion which may be different for a homogeoenous extended expansionp. | |
const boost::shared_ptr < LocalRegions::ExpansionVector > | GetExp () const |
This function returns the vector of elements in the expansion. | |
LocalRegions::ExpansionSharedPtr & | GetExp (int n) const |
This function returns (a shared pointer to) the local elemental expansion of the element. | |
LocalRegions::ExpansionSharedPtr & | GetExp (const Array< OneD, const NekDouble > &gloCoord) |
This function returns (a shared pointer to) the local elemental expansion containing the arbitrary point given by gloCoord. | |
int | GetExpIndex (const Array< OneD, const NekDouble > &gloCoord, NekDouble tol=0.0, bool returnNearestElmt=false) |
int | GetExpIndex (const Array< OneD, const NekDouble > &gloCoords, Array< OneD, NekDouble > &locCoords, NekDouble tol=0.0, bool returnNearestElmt=false) |
int | GetCoeff_Offset (int n) const |
Get the start offset position for a global list of m_coeffs correspoinding to element n. | |
int | GetPhys_Offset (int n) const |
Get the start offset position for a global list of m_phys correspoinding to element n. | |
int | GetOffset_Elmt_Id (int n) const |
Get the element id associated with the n th consecutive block of data in m_phys and m_coeffs. | |
Array< OneD, NekDouble > & | UpdateCoeffs () |
This function returns (a reference to) the array (implemented as m_coeffs) containing all local expansion coefficients. | |
Array< OneD, NekDouble > & | UpdatePhys () |
This function returns (a reference to) the array (implemented as m_phys) containing the function evaluated at the quadrature points. | |
void | PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
void | Upwind (const Array< OneD, const Array< OneD, NekDouble > > &Vec, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
void | Upwind (const Array< OneD, const NekDouble > &Vn, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
boost::shared_ptr< ExpList > & | GetTrace () |
boost::shared_ptr < AssemblyMapDG > & | GetTraceMap (void) |
const Array< OneD, const int > & | GetTraceBndMap (void) |
void | GetNormals (Array< OneD, Array< OneD, NekDouble > > &normals) |
void | AddTraceIntegral (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
void | AddTraceIntegral (const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
void | AddFwdBwdTraceIntegral (const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &outarray) |
void | GetFwdBwdTracePhys (Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
void | GetFwdBwdTracePhys (const Array< OneD, const NekDouble > &field, Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
void | ExtractTracePhys (Array< OneD, NekDouble > &outarray) |
void | ExtractTracePhys (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | EvaluateBoundaryConditions (const NekDouble time=0.0, const std::string varName="", const NekDouble=NekConstants::kNekUnsetDouble, const NekDouble=NekConstants::kNekUnsetDouble) |
void | GeneralMatrixOp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
This function calculates the result of the multiplication of a matrix of type specified by mkey with a vector given by inarray. | |
void | GeneralMatrixOp_IterPerExp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | SetUpPhysNormals () |
void | GeneralGetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef, int NumHomoDir=0, Array< OneD, LibUtilities::BasisSharedPtr > &HomoBasis=LibUtilities::NullBasisSharedPtr1DArray, std::vector< NekDouble > &HomoLen=LibUtilities::NullNekDoubleVector, std::vector< unsigned int > &HomoZIDs=LibUtilities::NullUnsignedIntVector, std::vector< unsigned int > &HomoYIDs=LibUtilities::NullUnsignedIntVector) |
const NekOptimize::GlobalOptParamSharedPtr & | GetGlobalOptParam (void) |
map< int, RobinBCInfoSharedPtr > | GetRobinBCInfo () |
void | GetPeriodicEntities (PeriodicMap &periodicVerts, PeriodicMap &periodicEdges, PeriodicMap &periodicFaces=NullPeriodicMap) |
std::vector < LibUtilities::FieldDefinitionsSharedPtr > | GetFieldDefinitions () |
void | GetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef) |
void | AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata) |
Append the element data listed in elements fielddef->m_ElementIDs onto fielddata. | |
void | AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, Array< OneD, NekDouble > &coeffs) |
Append the data in coeffs listed in elements fielddef->m_ElementIDs onto fielddata. | |
void | ExtractElmtDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract the data in fielddata into the coeffs using the basic ExpList Elemental expansions rather than planes in homogeneous case. | |
void | ExtractCoeffsToCoeffs (const boost::shared_ptr< ExpList > &fromExpList, const Array< OneD, const NekDouble > &fromCoeffs, Array< OneD, NekDouble > &toCoeffs) |
Extract the data from fromField using fromExpList the coeffs using the basic ExpList Elemental expansions rather than planes in homogeneous case. | |
void | ExtractDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract the data in fielddata into the coeffs. | |
boost::shared_ptr< ExpList > | GetSharedThisPtr () |
Returns a shared pointer to the current object. | |
boost::shared_ptr < LibUtilities::SessionReader > | GetSession () |
Returns the session object. | |
boost::shared_ptr < LibUtilities::Comm > | GetComm () |
Returns the comm object. | |
SpatialDomains::MeshGraphSharedPtr | GetGraph () |
LibUtilities::BasisSharedPtr | GetHomogeneousBasis (void) |
boost::shared_ptr< ExpList > & | GetPlane (int n) |
Public Attributes | |
Array< OneD, int > | m_BCtoElmMap |
Storage space for the boundary to element and boundary to trace map. This member variable is really allocated just in case a boundary expansion recasting is required at the solver level. Otherwise is the 2 vectors are not filled up. If is needed all the funcitons whihc require to use this map do not have to recalculate it anymore. | |
Array< OneD, int > | m_BCtoEdgMap |
Protected Member Functions | |
virtual void | v_GetBoundaryToElmtMap (Array< OneD, int > &ElmtID, Array< OneD, int > &EdgeID) |
virtual map< int, RobinBCInfoSharedPtr > | v_GetRobinBCInfo () |
Protected Member Functions inherited from Nektar::MultiRegions::ExpList3DHomogeneous2D | |
void | SetCoeffPhys (void) |
Definition of the total number of degrees of freedom and quadrature points. Sets up the storage for m_coeff and m_phys. | |
virtual void | v_GetCoords (Array< OneD, NekDouble > &coord_0, Array< OneD, NekDouble > &coord_1, Array< OneD, NekDouble > &coord_2) |
virtual void | v_WriteTecplotZone (std::ofstream &outfile, int expansion) |
virtual void | v_WriteVtkPieceHeader (std::ofstream &outfile, int expansion) |
virtual NekDouble | v_L2 (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
Protected Member Functions inherited from Nektar::MultiRegions::ExpListHomogeneous2D | |
DNekBlkMatSharedPtr | GenHomogeneous2DBlockMatrix (Homogeneous2DMatType mattype, CoeffState coeffstate=eLocal) const |
DNekBlkMatSharedPtr | GetHomogeneous2DBlockMatrix (Homogeneous2DMatType mattype, CoeffState coeffstate=eLocal) const |
virtual int | v_GetNumElmts (void) |
virtual void | v_FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_FwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_BwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_IProductWRTBase_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual std::vector < LibUtilities::FieldDefinitionsSharedPtr > | v_GetFieldDefinitions (void) |
virtual void | v_GetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef) |
virtual void | v_AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata) |
virtual void | v_AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, Array< OneD, NekDouble > &coeffs) |
virtual void | v_ExtractDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract data from raw field data into expansion list. | |
virtual void | v_HomogeneousFwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
virtual void | v_HomogeneousBwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
virtual void | v_DealiasedProd (const Array< OneD, NekDouble > &inarray1, const Array< OneD, NekDouble > &inarray2, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
virtual void | v_PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) |
virtual void | v_PhysDeriv (Direction edir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
Protected Member Functions inherited from Nektar::MultiRegions::ExpList | |
boost::shared_ptr< DNekMat > | GenGlobalMatrixFull (const GlobalLinSysKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
const DNekScalBlkMatSharedPtr | GenBlockMatrix (const GlobalMatrixKey &gkey) |
This function assembles the block diagonal matrix of local matrices of the type mtype. | |
const DNekScalBlkMatSharedPtr & | GetBlockMatrix (const GlobalMatrixKey &gkey) |
void | MultiplyByBlockMatrix (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
boost::shared_ptr< GlobalMatrix > | GenGlobalMatrix (const GlobalMatrixKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
Generates a global matrix from the given key and map. | |
void | GlobalEigenSystem (const boost::shared_ptr< DNekMat > &Gmat, Array< OneD, NekDouble > &EigValsReal, Array< OneD, NekDouble > &EigValsImag, Array< OneD, NekDouble > &EigVecs=NullNekDouble1DArray) |
boost::shared_ptr< GlobalLinSys > | GenGlobalLinSys (const GlobalLinSysKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
This operation constructs the global linear system of type mkey. | |
boost::shared_ptr< GlobalLinSys > | GenGlobalBndLinSys (const GlobalLinSysKey &mkey, const AssemblyMapSharedPtr &locToGloMap) |
Generate a GlobalLinSys from information provided by the key "mkey" and the mapping provided in LocToGloBaseMap. | |
void | ReadGlobalOptimizationParameters () |
virtual const Array< OneD, const boost::shared_ptr < ExpList > > & | v_GetBndCondExpansions (void) |
virtual boost::shared_ptr < ExpList > & | v_UpdateBndCondExpansion (int i) |
virtual void | v_Upwind (const Array< OneD, const Array< OneD, NekDouble > > &Vec, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
virtual void | v_Upwind (const Array< OneD, const NekDouble > &Vn, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
virtual boost::shared_ptr < ExpList > & | v_GetTrace () |
virtual boost::shared_ptr < AssemblyMapDG > & | v_GetTraceMap () |
virtual const Array< OneD, const int > & | v_GetTraceBndMap () |
virtual void | v_GetNormals (Array< OneD, Array< OneD, NekDouble > > &normals) |
virtual void | v_AddTraceIntegral (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddTraceIntegral (const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddFwdBwdTraceIntegral (const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &outarray) |
virtual void | v_GetFwdBwdTracePhys (Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
virtual void | v_GetFwdBwdTracePhys (const Array< OneD, const NekDouble > &field, Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
virtual void | v_ExtractTracePhys (Array< OneD, NekDouble > &outarray) |
virtual void | v_ExtractTracePhys (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_MultiplyByInvMassMatrix (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_HelmSolve (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const FlagList &flags, const StdRegions::ConstFactorMap &factors, const StdRegions::VarCoeffMap &varcoeff, const Array< OneD, const NekDouble > &dirForcing) |
virtual void | v_LinearAdvectionDiffusionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
virtual void | v_LinearAdvectionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
virtual void | v_ImposeDirichletConditions (Array< OneD, NekDouble > &outarray) |
virtual void | v_FillBndCondFromField () |
virtual void | v_LocalToGlobal (void) |
virtual void | v_GlobalToLocal (void) |
virtual void | v_SmoothField (Array< OneD, NekDouble > &field) |
virtual void | v_GeneralMatrixOp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
virtual void | v_GetBCValues (Array< OneD, NekDouble > &BndVals, const Array< OneD, NekDouble > &TotField, int BndID) |
virtual void | v_NormVectorIProductWRTBase (Array< OneD, const NekDouble > &V1, Array< OneD, const NekDouble > &V2, Array< OneD, NekDouble > &outarray, int BndID) |
virtual void | v_SetUpPhysNormals () |
virtual void | v_ReadGlobalOptimizationParameters () |
virtual void | v_ExtractCoeffsToCoeffs (const boost::shared_ptr< ExpList > &fromExpList, const Array< OneD, const NekDouble > &fromCoeffs, Array< OneD, NekDouble > &toCoeffs) |
virtual void | v_WriteTecplotHeader (std::ofstream &outfile, std::string var="") |
virtual void | v_WriteTecplotField (std::ofstream &outfile, int expansion) |
virtual void | v_WriteTecplotConnectivity (std::ofstream &outfile, int expansion) |
virtual void | v_WriteVtkPieceData (std::ofstream &outfile, int expansion, std::string var) |
virtual NekDouble | v_Integral (const Array< OneD, const NekDouble > &inarray) |
virtual Array< OneD, const NekDouble > | v_HomogeneousEnergy (void) |
virtual LibUtilities::TranspositionSharedPtr | v_GetTransposition (void) |
virtual NekDouble | v_GetHomoLen (void) |
virtual Array< OneD, const unsigned int > | v_GetZIDs (void) |
virtual Array< OneD, const unsigned int > | v_GetYIDs (void) |
virtual void | v_PhysInterp1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_PhysGalerkinProjection1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | ExtractFileBCs (const std::string &fileName, const std::string &varName, const boost::shared_ptr< ExpList > locExpList) |
Protected Attributes | |
Array< OneD, MultiRegions::ExpListSharedPtr > | m_bndCondExpansions |
Array< OneD, SpatialDomains::BoundaryConditionShPtr > | m_bndConditions |
Private Member Functions | |
virtual void | v_HelmSolve (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const FlagList &flags, const StdRegions::ConstFactorMap &factors, const StdRegions::VarCoeffMap &varcoeff, const Array< OneD, const NekDouble > &dirForcing) |
virtual void | v_EvaluateBoundaryConditions (const NekDouble time=0.0, const std::string varName="", const NekDouble x2_in=NekConstants::kNekUnsetDouble, const NekDouble x3_in=NekConstants::kNekUnsetDouble) |
virtual const Array< OneD, const boost::shared_ptr < ExpList > > & | v_GetBndCondExpansions (void) |
virtual const Array< OneD, const SpatialDomains::BoundaryConditionShPtr > & | v_GetBndConditions () |
virtual boost::shared_ptr < ExpList > & | v_UpdateBndCondExpansion (int i) |
virtual Array< OneD, SpatialDomains::BoundaryConditionShPtr > & | v_UpdateBndConditions () |
Additional Inherited Members | |
Static Protected Member Functions inherited from Nektar::MultiRegions::ExpList | |
static SpatialDomains::BoundaryConditionShPtr | GetBoundaryCondition (const SpatialDomains::BoundaryConditionCollection &collection, unsigned int index, const std::string &variable) |
Definition at line 47 of file DisContField3DHomogeneous2D.h.
Nektar::MultiRegions::DisContField3DHomogeneous2D::DisContField3DHomogeneous2D | ( | void | ) |
Definition at line 46 of file DisContField3DHomogeneous2D.cpp.
Nektar::MultiRegions::DisContField3DHomogeneous2D::DisContField3DHomogeneous2D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const LibUtilities::BasisKey & | HomoBasis_y, | ||
const LibUtilities::BasisKey & | HomoBasis_z, | ||
const NekDouble | lhom_y, | ||
const NekDouble | lhom_z, | ||
const bool | useFFT, | ||
const bool | dealiasing | ||
) |
Definition at line 53 of file DisContField3DHomogeneous2D.cpp.
Nektar::MultiRegions::DisContField3DHomogeneous2D::DisContField3DHomogeneous2D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const LibUtilities::BasisKey & | HomoBasis_y, | ||
const LibUtilities::BasisKey & | HomoBasis_z, | ||
const NekDouble | lhom_y, | ||
const NekDouble | lhom_z, | ||
const bool | useFFT, | ||
const bool | dealiasing, | ||
const SpatialDomains::MeshGraphSharedPtr & | graph1D, | ||
const std::string & | variable | ||
) |
Definition at line 84 of file DisContField3DHomogeneous2D.cpp.
References Nektar::MultiRegions::ExpList::GetExp(), Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_exp, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_y, Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_z, Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, Nektar::MultiRegions::ExpList3DHomogeneous2D::SetCoeffPhys(), and SetupBoundaryConditions().
Nektar::MultiRegions::DisContField3DHomogeneous2D::DisContField3DHomogeneous2D | ( | const DisContField3DHomogeneous2D & | In, |
const bool | DeclareLinesSetCoeffPhys = true |
||
) |
Copy constructor.
Definition at line 66 of file DisContField3DHomogeneous2D.cpp.
References Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, and Nektar::MultiRegions::ExpList3DHomogeneous2D::SetCoeffPhys().
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virtual |
void Nektar::MultiRegions::DisContField3DHomogeneous2D::EvaluateBoundaryConditions | ( | const NekDouble | time = 0.0 , |
const std::string | varName = "" |
||
) |
Definition at line 178 of file DisContField3DHomogeneous2D.cpp.
References Nektar::SpatialDomains::eTimeDependent, Nektar::MultiRegions::ExpList::GetCoeffs(), m_bndCondExpansions, m_bndConditions, Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_y, Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_z, Nektar::MultiRegions::ExpListHomogeneous2D::m_lhom_y, Nektar::MultiRegions::ExpListHomogeneous2D::m_lhom_z, Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, Nektar::MultiRegions::ExpListHomogeneous2D::m_ny, Nektar::MultiRegions::ExpListHomogeneous2D::m_nz, and Nektar::MultiRegions::ExpList::UpdateCoeffs().
Referenced by SetupBoundaryConditions(), and v_EvaluateBoundaryConditions().
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inline |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 153 of file DisContField3DHomogeneous2D.h.
References m_bndCondExpansions.
Referenced by v_GetBndCondExpansions().
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inline |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 158 of file DisContField3DHomogeneous2D.h.
References m_bndConditions.
Referenced by v_GetBndConditions().
void Nektar::MultiRegions::DisContField3DHomogeneous2D::GetBoundaryToElmtMap | ( | Array< OneD, int > & | ElmtID, |
Array< OneD, int > & | EdgeID | ||
) |
Set up a list of element ids and edge ids the link to the boundary conditions.
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 287 of file DisContField3DHomogeneous2D.cpp.
References m_BCtoEdgMap, m_BCtoElmMap, Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, and Vmath::Vcopy().
Referenced by v_GetBoundaryToElmtMap().
void Nektar::MultiRegions::DisContField3DHomogeneous2D::SetupBoundaryConditions | ( | const LibUtilities::BasisKey & | HomoBasis_y, |
const LibUtilities::BasisKey & | HomoBasis_z, | ||
const NekDouble | lhom_y, | ||
const NekDouble | lhom_z, | ||
SpatialDomains::BoundaryConditions & | bcs | ||
) |
Definition at line 140 of file DisContField3DHomogeneous2D.cpp.
References EvaluateBoundaryConditions(), Nektar::SpatialDomains::BoundaryConditions::GetBoundaryRegions(), m_bndCondExpansions, m_bndConditions, Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, Nektar::MultiRegions::ExpList::m_session, and Nektar::MultiRegions::ExpListHomogeneous2D::m_useFFT.
Referenced by Nektar::MultiRegions::ContField3DHomogeneous2D::ContField3DHomogeneous2D(), and DisContField3DHomogeneous2D().
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inline |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 163 of file DisContField3DHomogeneous2D.h.
References m_bndCondExpansions.
Referenced by v_UpdateBndCondExpansion().
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inline |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 168 of file DisContField3DHomogeneous2D.h.
References m_bndConditions.
Referenced by v_UpdateBndConditions().
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privatevirtual |
Definition at line 258 of file DisContField3DHomogeneous2D.cpp.
References EvaluateBoundaryConditions().
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privatevirtual |
Definition at line 267 of file DisContField3DHomogeneous2D.cpp.
References GetBndCondExpansions().
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privatevirtual |
Definition at line 272 of file DisContField3DHomogeneous2D.cpp.
References GetBndConditions().
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inlineprotectedvirtual |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 113 of file DisContField3DHomogeneous2D.h.
References GetBoundaryToElmtMap().
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inlineprotectedvirtual |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 120 of file DisContField3DHomogeneous2D.h.
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privatevirtual |
Definition at line 209 of file DisContField3DHomogeneous2D.cpp.
References Nektar::StdRegions::eFactorLambda, Nektar::MultiRegions::ExpListHomogeneous2D::HomogeneousFwdTrans(), Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_y, Nektar::MultiRegions::ExpListHomogeneous2D::m_homogeneousBasis_z, Nektar::MultiRegions::ExpListHomogeneous2D::m_lhom_y, Nektar::MultiRegions::ExpListHomogeneous2D::m_lhom_z, Nektar::MultiRegions::ExpListHomogeneous2D::m_lines, and Nektar::MultiRegions::ExpList::m_WaveSpace.
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privatevirtual |
Definition at line 277 of file DisContField3DHomogeneous2D.cpp.
References UpdateBndCondExpansion().
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privatevirtual |
Definition at line 282 of file DisContField3DHomogeneous2D.cpp.
References UpdateBndConditions().
Array<OneD, int> Nektar::MultiRegions::DisContField3DHomogeneous2D::m_BCtoEdgMap |
Definition at line 105 of file DisContField3DHomogeneous2D.h.
Referenced by GetBoundaryToElmtMap().
Array<OneD, int> Nektar::MultiRegions::DisContField3DHomogeneous2D::m_BCtoElmMap |
Storage space for the boundary to element and boundary to trace map. This member variable is really allocated just in case a boundary expansion recasting is required at the solver level. Otherwise is the 2 vectors are not filled up. If is needed all the funcitons whihc require to use this map do not have to recalculate it anymore.
Definition at line 104 of file DisContField3DHomogeneous2D.h.
Referenced by GetBoundaryToElmtMap().
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protected |
Definition at line 109 of file DisContField3DHomogeneous2D.h.
Referenced by EvaluateBoundaryConditions(), GetBndCondExpansions(), SetupBoundaryConditions(), and UpdateBndCondExpansion().
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protected |
Definition at line 111 of file DisContField3DHomogeneous2D.h.
Referenced by EvaluateBoundaryConditions(), GetBndConditions(), SetupBoundaryConditions(), and UpdateBndConditions().