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Nektar::StdRegions::StdPointExp Class Reference

#include <StdPointExp.h>

Inheritance diagram for Nektar::StdRegions::StdPointExp:
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Public Member Functions

 StdPointExp ()
 
 StdPointExp (const LibUtilities::BasisKey &Ba)
 
 StdPointExp (const StdPointExp &T)
 Copy Constructor. More...
 
 ~StdPointExp ()
 
- Public Member Functions inherited from Nektar::StdRegions::StdExpansion0D
 StdExpansion0D ()
 
 StdExpansion0D (int numcoeffs, const LibUtilities::BasisKey &Ba)
 
 StdExpansion0D (const StdExpansion0D &T)
 
virtual ~StdExpansion0D ()
 
void PhysTensorDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
- Public Member Functions inherited from Nektar::StdRegions::StdExpansion
 StdExpansion ()
 Default Constructor. More...
 
 StdExpansion (const int numcoeffs, const int numbases, const LibUtilities::BasisKey &Ba=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bb=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bc=LibUtilities::NullBasisKey)
 Constructor. More...
 
 StdExpansion (const StdExpansion &T)
 Copy Constructor. More...
 
virtual ~StdExpansion ()
 Destructor. More...
 
int GetNumBases () const
 This function returns the number of 1D bases used in the expansion. More...
 
const Array< OneD, const LibUtilities::BasisSharedPtr > & GetBase () const
 This function gets the shared point to basis. More...
 
const LibUtilities::BasisSharedPtrGetBasis (int dir) const
 This function gets the shared point to basis in the dir direction. More...
 
int GetNcoeffs (void) const
 This function returns the total number of coefficients used in the expansion. More...
 
int GetTotPoints () const
 This function returns the total number of quadrature points used in the element. More...
 
LibUtilities::BasisType GetBasisType (const int dir) const
 This function returns the type of basis used in the dir direction. More...
 
int GetBasisNumModes (const int dir) const
 This function returns the number of expansion modes in the dir direction. More...
 
int EvalBasisNumModesMax (void) const
 This function returns the maximum number of expansion modes over all local directions. More...
 
LibUtilities::PointsType GetPointsType (const int dir) const
 This function returns the type of quadrature points used in the dir direction. More...
 
int GetNumPoints (const int dir) const
 This function returns the number of quadrature points in the dir direction. More...
 
const Array< OneD, const NekDouble > & GetPoints (const int dir) const
 This function returns a pointer to the array containing the quadrature points in dir direction. More...
 
int GetNverts () const
 This function returns the number of vertices of the expansion domain. More...
 
int GetNedges () const
 This function returns the number of edges of the expansion domain. More...
 
int GetEdgeNcoeffs (const int i) const
 This function returns the number of expansion coefficients belonging to the i-th edge. More...
 
int GetTotalEdgeIntNcoeffs () const
 
int GetEdgeNumPoints (const int i) const
 This function returns the number of quadrature points belonging to the i-th edge. More...
 
int DetCartesianDirOfEdge (const int edge)
 
const LibUtilities::BasisKey DetEdgeBasisKey (const int i) const
 
const LibUtilities::BasisKey DetFaceBasisKey (const int i, const int k) const
 
int GetFaceNumPoints (const int i) const
 This function returns the number of quadrature points belonging to the i-th face. More...
 
int GetFaceNcoeffs (const int i) const
 This function returns the number of expansion coefficients belonging to the i-th face. More...
 
int GetFaceIntNcoeffs (const int i) const
 
int GetTotalFaceIntNcoeffs () const
 
int GetTraceNcoeffs (const int i) const
 This function returns the number of expansion coefficients belonging to the i-th edge/face. More...
 
LibUtilities::PointsKey GetFacePointsKey (const int i, const int j) const
 
int NumBndryCoeffs (void) const
 
int NumDGBndryCoeffs (void) const
 
LibUtilities::BasisType GetEdgeBasisType (const int i) const
 This function returns the type of expansion basis on the i-th edge. More...
 
const LibUtilities::PointsKey GetNodalPointsKey () const
 This function returns the type of expansion Nodal point type if defined. More...
 
int GetNfaces () const
 This function returns the number of faces of the expansion domain. More...
 
int GetNtrace () const
 Returns the number of trace elements connected to this element. More...
 
LibUtilities::ShapeType DetShapeType () const
 This function returns the shape of the expansion domain. More...
 
std::shared_ptr< StdExpansionGetStdExp (void) const
 
std::shared_ptr< StdExpansionGetLinStdExp (void) const
 
int GetShapeDimension () const
 
bool IsBoundaryInteriorExpansion ()
 
bool IsNodalNonTensorialExp ()
 
void BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Backward transformation from coefficient space to physical space. More...
 
void FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Forward transformation from physical space to coefficient space. More...
 
void FwdTrans_BndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
NekDouble Integral (const Array< OneD, const NekDouble > &inarray)
 This function integrates the specified function over the domain. More...
 
void FillMode (const int mode, Array< OneD, NekDouble > &outarray)
 This function fills the array outarray with the mode-th mode of the expansion. More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 this function calculates the inner product of a given function f with the different modes of the expansion More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &base, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int coll_check)
 
void IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
int GetElmtId ()
 Get the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void SetElmtId (const int id)
 Set the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2=NullNekDouble1DArray, Array< OneD, NekDouble > &coords_3=NullNekDouble1DArray)
 this function returns the physical coordinates of the quadrature points of the expansion More...
 
void GetCoord (const Array< OneD, const NekDouble > &Lcoord, Array< OneD, NekDouble > &coord)
 given the coordinates of a point of the element in the local collapsed coordinate system, this function calculates the physical coordinates of the point More...
 
DNekMatSharedPtr GetStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr GetStdStaticCondMatrix (const StdMatrixKey &mkey)
 
IndexMapValuesSharedPtr GetIndexMap (const IndexMapKey &ikey)
 
const Array< OneD, const NekDouble > & GetPhysNormals (void)
 
void SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
virtual void SetUpPhysNormals (const int edge)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble > > &Fvec, Array< OneD, NekDouble > &outarray)
 
DNekScalBlkMatSharedPtr GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
void DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
StdRegions::Orientation GetForient (int face)
 
StdRegions::Orientation GetEorient (int edge)
 
void SetCoeffsToOrientation (Array< OneD, NekDouble > &coeffs, StdRegions::Orientation dir)
 
void SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
int CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
NekDouble StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 
int GetCoordim ()
 
void GetBoundaryMap (Array< OneD, unsigned int > &outarray)
 
void GetInteriorMap (Array< OneD, unsigned int > &outarray)
 
int GetVertexMap (const int localVertexId, bool useCoeffPacking=false)
 
void GetEdgeInteriorMap (const int eid, const Orientation edgeOrient, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray)
 
void GetFaceNumModes (const int fid, const Orientation faceOrient, int &numModes0, int &numModes1)
 
void GetFaceInteriorMap (const int fid, const Orientation faceOrient, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray)
 
void GetEdgeToElementMap (const int eid, const Orientation edgeOrient, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, int P=-1)
 
void GetFaceToElementMap (const int fid, const Orientation faceOrient, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, int nummodesA=-1, int nummodesB=-1)
 
void GetEdgePhysVals (const int edge, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Extract the physical values along edge edge from inarray into outarray following the local edge orientation and point distribution defined by defined in EdgeExp. More...
 
void GetEdgePhysVals (const int edge, const std::shared_ptr< StdExpansion > &EdgeExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GetTracePhysVals (const int edge, const std::shared_ptr< StdExpansion > &EdgeExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GetVertexPhysVals (const int vertex, const Array< OneD, const NekDouble > &inarray, NekDouble &outarray)
 
void GetEdgeInterpVals (const int edge, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GetEdgeQFactors (const int edge, Array< OneD, NekDouble > &outarray)
 Extract the metric factors to compute the contravariant fluxes along edge edge and stores them into outarray following the local edge orientation (i.e. anticlockwise convention). More...
 
void GetFacePhysVals (const int face, const std::shared_ptr< StdExpansion > &FaceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient=eNoOrientation)
 
void GetEdgePhysMap (const int edge, Array< OneD, int > &outarray)
 
void GetFacePhysMap (const int face, Array< OneD, int > &outarray)
 
void MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
DNekMatSharedPtr CreateGeneralMatrix (const StdMatrixKey &mkey)
 this function generates the mass matrix \(\mathbf{M}[i][j] = \int \phi_i(\mathbf{x}) \phi_j(\mathbf{x}) d\mathbf{x}\) More...
 
void GeneralMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void ReduceOrderCoeffs (int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void SVVLaplacianFilter (Array< OneD, NekDouble > &array, const StdMatrixKey &mkey)
 
void ExponentialFilter (Array< OneD, NekDouble > &array, const NekDouble alpha, const NekDouble exponent, const NekDouble cutoff)
 
void LaplacianMatrixOp (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
DNekMatSharedPtr GenMatrix (const StdMatrixKey &mkey)
 
void PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void PhysDeriv_s (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_ds)
 
void PhysDeriv_n (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_dn)
 
void PhysDirectionalDeriv (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &outarray)
 
void StdPhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void StdPhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void AddRobinMassMatrix (const int edgeid, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
 
void AddRobinEdgeContribution (const int edgeid, const Array< OneD, const NekDouble > &primCoeffs, Array< OneD, NekDouble > &coeffs)
 
NekDouble PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluate (const Array< OneD, DNekMatSharedPtr > &I, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
void LocCoordToLocCollapsed (const Array< OneD, const NekDouble > &xi, Array< OneD, NekDouble > &eta)
 Convert local cartesian coordinate xi into local collapsed coordinates eta. More...
 
virtual int v_GetElmtId ()
 Get the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
virtual const Array< OneD, const NekDouble > & v_GetPhysNormals (void)
 
virtual void v_SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
virtual void v_SetUpPhysNormals (const int edge)
 
virtual int v_CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble > > &Fvec, Array< OneD, NekDouble > &outarray)
 
virtual DNekScalBlkMatSharedPtr v_GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual void v_DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual StdRegions::Orientation v_GetForient (int face)
 
virtual StdRegions::Orientation v_GetEorient (int edge)
 
NekDouble Linf (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_\infty\) error \( |\epsilon|_\infty = \max |u - u_{exact}|\) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble L2 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_2\) error, \( | \epsilon |_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble H1 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( H^1\) error, \( | \epsilon |^1_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 + \nabla(u - u_{exact})\cdot\nabla(u - u_{exact})\cdot dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
const NormalVectorGetEdgeNormal (const int edge) const
 
void ComputeEdgeNormal (const int edge)
 
void NegateEdgeNormal (const int edge)
 
bool EdgeNormalNegated (const int edge)
 
void ComputeFaceNormal (const int face)
 
void NegateFaceNormal (const int face)
 
bool FaceNormalNegated (const int face)
 
void ComputeVertexNormal (const int vertex)
 
void NegateVertexNormal (const int vertex)
 
bool VertexNormalNegated (const int vertex)
 
const NormalVectorGetFaceNormal (const int face) const
 
const NormalVectorGetVertexNormal (const int vertex) const
 
const NormalVectorGetSurfaceNormal (const int id) const
 
const LibUtilities::PointsKeyVector GetPointsKeys () const
 
Array< OneD, unsigned int > GetEdgeInverseBoundaryMap (int eid)
 
Array< OneD, unsigned int > GetFaceInverseBoundaryMap (int fid, StdRegions::Orientation faceOrient=eNoOrientation, int P1=-1, int P2=-1)
 
void GetInverseBoundaryMaps (Array< OneD, unsigned int > &vmap, Array< OneD, Array< OneD, unsigned int > > &emap, Array< OneD, Array< OneD, unsigned int > > &fmap)
 
DNekMatSharedPtr BuildInverseTransformationMatrix (const DNekScalMatSharedPtr &m_transformationmatrix)
 
void PhysInterpToSimplexEquiSpaced (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int npset=-1)
 This function performs an interpolation from the physical space points provided at input into an array of equispaced points which are not the collapsed coordinate. So for a tetrahedron you will only get a tetrahedral number of values. More...
 
void GetSimplexEquiSpacedConnectivity (Array< OneD, int > &conn, bool standard=true)
 This function provides the connectivity of local simplices (triangles or tets) to connect the equispaced data points provided by PhysInterpToSimplexEquiSpaced. More...
 
void EquiSpacedToCoeffs (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs a projection/interpolation from the equispaced points sometimes used in post-processing onto the coefficient space. More...
 
template<class T >
std::shared_ptr< T > as ()
 
void IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true)
 

Protected Member Functions

virtual void v_GetCoords (Array< OneD, NekDouble > &coords_0, Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2)
 
virtual LibUtilities::ShapeType v_DetShapeType () const
 
virtual void v_BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Transform a given function from physical quadrature space to coefficient space. More...
 
virtual void v_BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_FwdTrans_BndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Calculates the inner product of a given function f with the different modes of the expansion. More...
 
virtual void v_IProductWRTBase (const Array< OneD, const NekDouble > &base, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int coll_check)
 
virtual void v_IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true)
 
virtual void v_IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual DNekMatSharedPtr v_GenMatrix (const StdMatrixKey &mkey)
 
virtual DNekMatSharedPtr v_CreateStdMatrix (const StdMatrixKey &mkey)
 
- Protected Member Functions inherited from Nektar::StdRegions::StdExpansion0D
virtual NekDouble v_PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals)
 
- Protected Member Functions inherited from Nektar::StdRegions::StdExpansion
DNekMatSharedPtr CreateStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr CreateStdStaticCondMatrix (const StdMatrixKey &mkey)
 Create the static condensation of a matrix when using a boundary interior decomposition. More...
 
IndexMapValuesSharedPtr CreateIndexMap (const IndexMapKey &ikey)
 Create an IndexMap which contains mapping information linking any specific element shape with either its boundaries, edges, faces, verteces, etc. More...
 
void BwdTrans_MatOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase_SumFac (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GeneralMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree_Kernel (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp)
 
void LaplacianMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp_MatFree (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void HelmholtzMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
virtual void v_SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_SetCoeffsToOrientation (Array< OneD, NekDouble > &coeffs, StdRegions::Orientation dir)
 
virtual NekDouble v_StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 

Private Member Functions

virtual int v_GetNverts () const
 
virtual int v_GetVertexMap (int localVertexId, bool useCoeffPacking=false)
 

Additional Inherited Members

- Protected Attributes inherited from Nektar::StdRegions::StdExpansion0D
std::map< int, NormalVectorm_vertexNormals
 
- Protected Attributes inherited from Nektar::StdRegions::StdExpansion
Array< OneD, LibUtilities::BasisSharedPtrm_base
 
int m_elmt_id
 
int m_ncoeffs
 
LibUtilities::NekManager< StdMatrixKey, DNekMat, StdMatrixKey::opLessm_stdMatrixManager
 
LibUtilities::NekManager< StdMatrixKey, DNekBlkMat, StdMatrixKey::opLessm_stdStaticCondMatrixManager
 
LibUtilities::NekManager< IndexMapKey, IndexMapValues, IndexMapKey::opLessm_IndexMapManager
 

Detailed Description

Definition at line 48 of file StdPointExp.h.

Constructor & Destructor Documentation

◆ StdPointExp() [1/3]

Nektar::StdRegions::StdPointExp::StdPointExp ( )

Definition at line 46 of file StdPointExp.cpp.

47  {
48  }

◆ StdPointExp() [2/3]

Nektar::StdRegions::StdPointExp::StdPointExp ( const LibUtilities::BasisKey Ba)

Definition at line 51 of file StdPointExp.cpp.

51  :
52  StdExpansion(Ba.GetNumModes(), 1, Ba),
53  StdExpansion0D(Ba.GetNumModes(),Ba)
54  {
55  }
StdExpansion()
Default Constructor.

◆ StdPointExp() [3/3]

Nektar::StdRegions::StdPointExp::StdPointExp ( const StdPointExp T)

Copy Constructor.

Definition at line 60 of file StdPointExp.cpp.

60  :
61  StdExpansion(T),
63  {
64  }
StdExpansion()
Default Constructor.

◆ ~StdPointExp()

Nektar::StdRegions::StdPointExp::~StdPointExp ( )

Definition at line 68 of file StdPointExp.cpp.

69  {
70  }

Member Function Documentation

◆ v_BwdTrans()

void Nektar::StdRegions::StdPointExp::v_BwdTrans ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Implements Nektar::StdRegions::StdExpansion.

Definition at line 90 of file StdPointExp.cpp.

References Blas::Dgemv(), Nektar::StdRegions::StdExpansion::m_base, and Vmath::Vcopy().

Referenced by v_BwdTrans_SumFac().

93  {
94  int nquad = m_base[0]->GetNumPoints();
95 
96  if(m_base[0]->Collocation())
97  {
98  Vmath::Vcopy(nquad, inarray, 1, outarray, 1);
99  }
100  else
101  {
102  Blas::Dgemv('N',nquad,m_base[0]->GetNumModes(),1.0,
103  (m_base[0]->GetBdata()).get(),
104  nquad,&inarray[0],1,0.0,&outarray[0],1);
105  }
106  }
static void Dgemv(const char &trans, const int &m, const int &n, const double &alpha, const double *a, const int &lda, const double *x, const int &incx, const double &beta, double *y, const int &incy)
BLAS level 2: Matrix vector multiply y = A x where A[m x n].
Definition: Blas.hpp:168
Array< OneD, LibUtilities::BasisSharedPtr > m_base
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1064

◆ v_BwdTrans_SumFac()

void Nektar::StdRegions::StdPointExp::v_BwdTrans_SumFac ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 190 of file StdPointExp.cpp.

References v_BwdTrans().

192  {
193  v_BwdTrans(inarray, outarray);
194  }
virtual void v_BwdTrans(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Definition: StdPointExp.cpp:90

◆ v_CreateStdMatrix()

DNekMatSharedPtr Nektar::StdRegions::StdPointExp::v_CreateStdMatrix ( const StdMatrixKey mkey)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 276 of file StdPointExp.cpp.

References v_GenMatrix().

277  {
278  return v_GenMatrix(mkey);
279  }
virtual DNekMatSharedPtr v_GenMatrix(const StdMatrixKey &mkey)

◆ v_DetShapeType()

LibUtilities::ShapeType Nektar::StdRegions::StdPointExp::v_DetShapeType ( ) const
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 73 of file StdPointExp.cpp.

References Nektar::LibUtilities::ePoint.

Referenced by v_FwdTrans(), v_FwdTrans_BndConstrained(), and v_GenMatrix().

◆ v_FwdTrans()

void Nektar::StdRegions::StdPointExp::v_FwdTrans ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Transform a given function from physical quadrature space to coefficient space.

See also
StdExpansion::FwdTrans

Implements Nektar::StdRegions::StdExpansion.

Definition at line 109 of file StdPointExp.cpp.

References Nektar::eCopy, Nektar::StdRegions::eInvMass, Nektar::eWrapper, Nektar::StdRegions::StdExpansion::GetStdMatrix(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, v_DetShapeType(), v_IProductWRTBase(), and Vmath::Vcopy().

111  {
112  if(m_base[0]->Collocation())
113  {
114  Vmath::Vcopy(m_ncoeffs, inarray, 1, outarray, 1);
115  }
116  else
117  {
118  v_IProductWRTBase(inarray,outarray);
119 
120  // get Mass matrix inverse
121  StdMatrixKey masskey(eInvMass,v_DetShapeType(),*this);
122  DNekMatSharedPtr matsys = GetStdMatrix(masskey);
123 
124  NekVector<NekDouble> in(m_ncoeffs,outarray,eCopy);
125  NekVector<NekDouble> out(m_ncoeffs,outarray,eWrapper);
126 
127  out = (*matsys)*in;
128  }
129  }
virtual LibUtilities::ShapeType v_DetShapeType() const
Definition: StdPointExp.cpp:73
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Calculates the inner product of a given function f with the different modes of the expansion...
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:69
DNekMatSharedPtr GetStdMatrix(const StdMatrixKey &mkey)
Definition: StdExpansion.h:714
Array< OneD, LibUtilities::BasisSharedPtr > m_base
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1064

◆ v_FwdTrans_BndConstrained()

void Nektar::StdRegions::StdPointExp::v_FwdTrans_BndConstrained ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 131 of file StdPointExp.cpp.

References ASSERTL0, Blas::Dgemv(), Nektar::LibUtilities::eGLL_Lagrange, Nektar::StdRegions::eMass, Nektar::LibUtilities::eModified_A, Nektar::LibUtilities::eModified_B, Nektar::StdRegions::StdExpansion::GetBasisType(), Nektar::StdRegions::StdExpansion::GetVertexMap(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, Nektar::StdRegions::StdExpansion::m_stdStaticCondMatrixManager, Nektar::StdRegions::StdExpansion::MassMatrixOp(), v_DetShapeType(), v_IProductWRTBase(), Vmath::Vcopy(), and Vmath::Vsub().

134  {
135  if(m_base[0]->Collocation())
136  {
137  Vmath::Vcopy(m_ncoeffs, inarray, 1, outarray, 1);
138  }
139  else
140  {
141  int nInteriorDofs = m_ncoeffs-2;
142  int offset = 0;
143 
144  switch(m_base[0]->GetBasisType())
145  {
147  {
148  offset = 1;
149  }
150  break;
153  {
154  offset = 2;
155  }
156  break;
157  default:
158  ASSERTL0(false,"This type of FwdTrans is not defined for this shapex type");
159  }
160 
161  fill(outarray.get(), outarray.get()+m_ncoeffs, 0.0 );
162 
163  outarray[GetVertexMap(0)] = inarray[0];
164  outarray[GetVertexMap(1)] = inarray[m_base[0]->GetNumPoints()-1];
165 
166  if(m_ncoeffs>2)
167  {
168  // ideally, we would like to have tmp0 to be replaced by
169  // outarray (currently MassMatrixOp does not allow aliasing)
170  Array<OneD, NekDouble> tmp0(m_ncoeffs);
171  Array<OneD, NekDouble> tmp1(m_ncoeffs);
172 
173  StdMatrixKey masskey(eMass,v_DetShapeType(),*this);
174  MassMatrixOp(outarray,tmp0,masskey);
175  v_IProductWRTBase(inarray,tmp1);
176 
177  Vmath::Vsub(m_ncoeffs, tmp1, 1, tmp0, 1, tmp1, 1);
178 
179  // get Mass matrix inverse (only of interior DOF)
180  DNekMatSharedPtr matsys = (m_stdStaticCondMatrixManager[masskey])->GetBlock(1,1);
181 
182  Blas::Dgemv('N',nInteriorDofs,nInteriorDofs,1.0, &(matsys->GetPtr())[0],
183  nInteriorDofs,tmp1.get()+offset,1,0.0,outarray.get()+offset,1);
184  }
185  }
186 
187  }
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:216
virtual LibUtilities::ShapeType v_DetShapeType() const
Definition: StdPointExp.cpp:73
void MassMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
Definition: StdExpansion.h:974
Principle Modified Functions .
Definition: BasisType.h:48
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Calculates the inner product of a given function f with the different modes of the expansion...
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:69
LibUtilities::NekManager< StdMatrixKey, DNekBlkMat, StdMatrixKey::opLess > m_stdStaticCondMatrixManager
int GetVertexMap(const int localVertexId, bool useCoeffPacking=false)
Definition: StdExpansion.h:822
Principle Modified Functions .
Definition: BasisType.h:49
static void Dgemv(const char &trans, const int &m, const int &n, const double &alpha, const double *a, const int &lda, const double *x, const int &incx, const double &beta, double *y, const int &incy)
BLAS level 2: Matrix vector multiply y = A x where A[m x n].
Definition: Blas.hpp:168
void Vsub(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Subtract vector z = x-y.
Definition: Vmath.cpp:346
LibUtilities::BasisType GetBasisType(const int dir) const
This function returns the type of basis used in the dir direction.
Definition: StdExpansion.h:164
Lagrange for SEM basis .
Definition: BasisType.h:54
Array< OneD, LibUtilities::BasisSharedPtr > m_base
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1064

◆ v_GenMatrix()

DNekMatSharedPtr Nektar::StdRegions::StdPointExp::v_GenMatrix ( const StdMatrixKey mkey)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 246 of file StdPointExp.cpp.

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::StdRegions::StdExpansion::CreateGeneralMatrix(), Nektar::StdRegions::eFwdTrans, Nektar::StdRegions::eInvMass, Nektar::StdRegions::eIProductWRTBase, Nektar::StdRegions::StdMatrixKey::GetMatrixType(), Nektar::StdRegions::StdExpansion::GetStdMatrix(), Nektar::StdRegions::StdExpansion::m_ncoeffs, and v_DetShapeType().

Referenced by v_CreateStdMatrix().

247  {
248  DNekMatSharedPtr Mat;
249  MatrixType mattype;
250 
251  switch(mattype = mkey.GetMatrixType())
252  {
253  case eFwdTrans:
254  {
256  StdMatrixKey iprodkey(eIProductWRTBase,v_DetShapeType(),*this);
257  DNekMat &Iprod = *GetStdMatrix(iprodkey);
258  StdMatrixKey imasskey(eInvMass,v_DetShapeType(),*this);
259  DNekMat &Imass = *GetStdMatrix(imasskey);
260 
261  (*Mat) = Imass*Iprod;
262 
263  }
264  break;
265  default:
266  {
268  }
269  break;
270  }
271 
272  return Mat;
273  }
virtual LibUtilities::ShapeType v_DetShapeType() const
Definition: StdPointExp.cpp:73
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:69
DNekMatSharedPtr GetStdMatrix(const StdMatrixKey &mkey)
Definition: StdExpansion.h:714
static std::shared_ptr< DataType > AllocateSharedPtr(const Args &...args)
Allocate a shared pointer from the memory pool.
DNekMatSharedPtr CreateGeneralMatrix(const StdMatrixKey &mkey)
this function generates the mass matrix
NekMatrix< NekDouble, StandardMatrixTag > DNekMat
Definition: NekTypeDefs.hpp:51

◆ v_GetCoords()

void Nektar::StdRegions::StdPointExp::v_GetCoords ( Array< OneD, NekDouble > &  coords_0,
Array< OneD, NekDouble > &  coords_1,
Array< OneD, NekDouble > &  coords_2 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Reimplemented in Nektar::LocalRegions::PointExp.

Definition at line 79 of file StdPointExp.cpp.

References Blas::Dcopy(), Nektar::StdRegions::StdExpansion::GetNumPoints(), and Nektar::StdRegions::StdExpansion::m_base.

83  {
84  boost::ignore_unused(coords_1, coords_2);
85  Blas::Dcopy(GetNumPoints(0),(m_base[0]->GetZ()).get(),
86  1,&coords_0[0],1);
87  }
int GetNumPoints(const int dir) const
This function returns the number of quadrature points in the dir direction.
Definition: StdExpansion.h:228
Array< OneD, LibUtilities::BasisSharedPtr > m_base
static void Dcopy(const int &n, const double *x, const int &incx, double *y, const int &incy)
BLAS level 1: Copy x to y.
Definition: Blas.hpp:103

◆ v_GetNverts()

virtual int Nektar::StdRegions::StdPointExp::v_GetNverts ( ) const
inlineprivatevirtual

Implements Nektar::StdRegions::StdExpansion.

Definition at line 117 of file StdPointExp.h.

118  {
119  return 1;
120  }

◆ v_GetVertexMap()

virtual int Nektar::StdRegions::StdPointExp::v_GetVertexMap ( int  localVertexId,
bool  useCoeffPacking = false 
)
inlineprivatevirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 122 of file StdPointExp.h.

References ASSERTL2.

124  {
125  boost::ignore_unused(localVertexId, useCoeffPacking);
126  ASSERTL2(localVertexId == 0,
127  "Only single point in StdPointExp!");
128  return 0;
129  }
#define ASSERTL2(condition, msg)
Assert Level 2 – Debugging which is used FULLDEBUG compilation mode. This level assert is designed t...
Definition: ErrorUtil.hpp:274

◆ v_IProductWRTBase() [1/2]

void Nektar::StdRegions::StdPointExp::v_IProductWRTBase ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Calculates the inner product of a given function f with the different modes of the expansion.

Implements Nektar::StdRegions::StdExpansion.

Definition at line 220 of file StdPointExp.cpp.

References Nektar::StdRegions::StdExpansion::m_base.

Referenced by v_FwdTrans(), v_FwdTrans_BndConstrained(), v_IProductWRTBase_SumFac(), and v_IProductWRTDerivBase().

222  {
223  v_IProductWRTBase(m_base[0]->GetBdata(),inarray,outarray,1);
224  }
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Calculates the inner product of a given function f with the different modes of the expansion...
Array< OneD, LibUtilities::BasisSharedPtr > m_base

◆ v_IProductWRTBase() [2/2]

void Nektar::StdRegions::StdPointExp::v_IProductWRTBase ( const Array< OneD, const NekDouble > &  base,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray,
int  coll_check 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 197 of file StdPointExp.cpp.

References Blas::Dgemv(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, Vmath::Vcopy(), and Vmath::Vmul().

201  {
202  int nquad = m_base[0]->GetNumPoints();
203  Array<OneD, NekDouble> tmp(nquad);
204  Array<OneD, const NekDouble> z = m_base[0]->GetZ();
205  Array<OneD, const NekDouble> w = m_base[0]->GetW();
206 
207  Vmath::Vmul(nquad, inarray, 1, w, 1, tmp, 1);
208 
209  if(coll_check&&m_base[0]->Collocation())
210  {
211  Vmath::Vcopy(nquad, tmp, 1, outarray, 1);
212  }
213  else
214  {
215  Blas::Dgemv('T',nquad,m_ncoeffs,1.0,base.get(),nquad,
216  &tmp[0],1,0.0,outarray.get(),1);
217  }
218  }
static void Dgemv(const char &trans, const int &m, const int &n, const double &alpha, const double *a, const int &lda, const double *x, const int &incx, const double &beta, double *y, const int &incy)
BLAS level 2: Matrix vector multiply y = A x where A[m x n].
Definition: Blas.hpp:168
Array< OneD, LibUtilities::BasisSharedPtr > m_base
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1064
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.cpp:186

◆ v_IProductWRTBase_SumFac()

void Nektar::StdRegions::StdPointExp::v_IProductWRTBase_SumFac ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray,
bool  multiplybyweights = true 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 236 of file StdPointExp.cpp.

References Nektar::StdRegions::StdExpansion::m_base, and v_IProductWRTBase().

240  {
241  boost::ignore_unused(multiplybyweights);
242  v_IProductWRTBase(m_base[0]->GetBdata(),inarray,outarray,1);
243  }
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Calculates the inner product of a given function f with the different modes of the expansion...
Array< OneD, LibUtilities::BasisSharedPtr > m_base

◆ v_IProductWRTDerivBase()

void Nektar::StdRegions::StdPointExp::v_IProductWRTDerivBase ( const int  dir,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 226 of file StdPointExp.cpp.

References ASSERTL1, Nektar::StdRegions::StdExpansion::m_base, and v_IProductWRTBase().

230  {
231  boost::ignore_unused(dir);
232  ASSERTL1(dir >= 0 && dir < 1,"input dir is out of range");
233  v_IProductWRTBase(m_base[0]->GetDbdata(),inarray,outarray,1);
234  }
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Calculates the inner product of a given function f with the different modes of the expansion...
#define ASSERTL1(condition, msg)
Assert Level 1 – Debugging which is used whether in FULLDEBUG or DEBUG compilation mode...
Definition: ErrorUtil.hpp:250
Array< OneD, LibUtilities::BasisSharedPtr > m_base