PreconditionerLinear.cpp

Go to the documentation of this file.

///////////////////////////////////////////////////////////////////////////////
//
// File Preconditioner.cpp
//
// For more information, please see: http://www.nektar.info
//
// The MIT License
//
// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
// Department of Aeronautics, Imperial College London (UK), and Scientific
// Computing and Imaging Institute, University of Utah (USA).
//
// Permission is hereby granted, free of charge, to any person obtaining a
// copy of this software and associated documentation files (the "Software"),
// to deal in the Software without restriction, including without limitation
// the rights to use, copy, modify, merge, publish, distribute, sublicense,
// and/or sell copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included
// in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
// THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
// DEALINGS IN THE SOFTWARE.
//
// Description: Preconditioner definition
//
///////////////////////////////////////////////////////////////////////////////
 
#include <LibUtilities/BasicUtils/VDmathArray.hpp>
#include <MultiRegions/PreconditionerLinear.h>
#include <MultiRegions/GlobalMatrixKey.h>
#include <MultiRegions/GlobalLinSysIterativeStaticCond.h>
#include <MultiRegions/GlobalLinSys.h>
#include <MultiRegions/GlobalLinSysXxtFull.h>
 
#ifdef NEKTAR_USING_PETSC
#include <MultiRegions/GlobalLinSysPETScFull.h>
#endif
 
#include <LocalRegions/MatrixKey.h>
#include <cmath>
 
using namespace std;
 
namespace Nektar
{
    namespace MultiRegions
    {
        /**
         * Registers the class with the Factory.
         */
 
        string PreconditionerLinear::className1
                = GetPreconFactory().RegisterCreatorFunction(
                    "FullLinearSpace",
                    PreconditionerLinear::create,
                    "Full Linear space inverse Preconditioning");
 
        std::string PreconditionerLinear::solveType =
            LibUtilities::SessionReader::RegisterDefaultSolverInfo(
                "LinearPreconSolver",
                "Xxt");
        std::string PreconditionerLinear::solveTypeIds[] = {
            LibUtilities::SessionReader::RegisterEnumValue(
                "LinearPreconSolver",
                "PETSc",
                MultiRegions::eLinearPreconPETSc),
            LibUtilities::SessionReader::RegisterEnumValue(
                "LinearPreconSolver",
                "Xxt",
                MultiRegions::eLinearPreconXxt)
        };
 
        /**
         * @class PreconditionerLinear
         *
         * This class implements preconditioning for the conjugate
     * gradient matrix solver.
     */
 
        PreconditionerLinear::PreconditionerLinear(
            const std::shared_ptr<GlobalLinSys> &plinsys,
            const AssemblyMapSharedPtr &pLocToGloMap)
            : Preconditioner(plinsys, pLocToGloMap)
        {
        }
 
        void PreconditionerLinear::v_InitObject()
        {
        }
 
        void PreconditionerLinear::v_BuildPreconditioner()
        {
            GlobalSysSolnType sType  = m_locToGloMap.lock()->GetGlobalSysSolnType();
            ASSERTL0(sType == eIterativeStaticCond || sType == ePETScStaticCond,
                     "This type of preconditioning is not implemented "
                     "for this solver");
 
            std::shared_ptr<MultiRegions::ExpList>
                expList=((m_linsys.lock())->GetLocMat()).lock();
 
            LinearPreconSolver solveType =
                expList->GetSession()->GetSolverInfoAsEnum<LinearPreconSolver>(
                    "LinearPreconSolver");
 
            GlobalSysSolnType linSolveType;
 
            switch(solveType)
            {
                case eLinearPreconPETSc:
                {
                    linSolveType = ePETScFullMatrix;
#ifndef NEKTAR_USING_PETSC
                    NEKERROR(ErrorUtil::efatal,
                             "Nektar++ has not been compiled with "
                             "PETSc support.");
#endif
                    break;
                }
                case eLinearPreconXxt:
                default:
                {
                    linSolveType = eXxtFullMatrix;
                    break;
                }
            }
 
            m_vertLocToGloMap = m_locToGloMap.lock()->LinearSpaceMap(*expList, linSolveType);
 
            // Generate linear solve system.
            StdRegions::MatrixType mType =
                m_linsys.lock()->GetKey().GetMatrixType() == StdRegions::eMass ?
                StdRegions::ePreconLinearSpaceMass :
                StdRegions::ePreconLinearSpace;
 
            GlobalLinSysKey preconKey(mType, m_vertLocToGloMap, (m_linsys.lock())->GetKey().GetConstFactors());
 
            switch(solveType)
            {
                case eLinearPreconXxt:
                {
                    m_vertLinsys = MemoryManager<GlobalLinSysXxtFull>::
                        AllocateSharedPtr(preconKey,expList,m_vertLocToGloMap);
                    break;
                }
                case eLinearPreconPETSc:
                {
#ifdef NEKTAR_USING_PETSC
                    m_vertLinsys = MemoryManager<GlobalLinSysPETScFull>::
                        AllocateSharedPtr(preconKey,expList,m_vertLocToGloMap);
#else
                    ASSERTL0(false, "Nektar++ has not been compiled with "
                                    "PETSc support.");
#endif
                }
            }
    }
 
        /**
         *
         */
        void PreconditionerLinear::v_DoPreconditioner(
                const Array<OneD, NekDouble>& pInput,
                Array<OneD, NekDouble>& pOutput)
        {
            v_DoPreconditionerWithNonVertOutput(pInput,pOutput,NullNekDouble1DArray,
                                                NullNekDouble1DArray);
        }
 
        /**
         *
         */
        void PreconditionerLinear::v_DoPreconditionerWithNonVertOutput(
            const Array<OneD, NekDouble>& pInput,
            Array<OneD, NekDouble>& pOutput,
            const Array<OneD, NekDouble>& pNonVertOutput,
            Array<OneD, NekDouble>& pVertForce)
            {
            GlobalSysSolnType solvertype=m_locToGloMap.lock()->GetGlobalSysSolnType();
            switch(solvertype)
            {
                case MultiRegions::eIterativeStaticCond:
                case MultiRegions::ePETScStaticCond:
                {
                    int i,val;
                    int nloc = m_vertLocToGloMap->GetNumLocalCoeffs();
                    int nglo = m_vertLocToGloMap->GetNumGlobalCoeffs();
                    // mapping from full space to vertices
                    Array<OneD, int> LocToGloBnd = m_vertLocToGloMap->GetLocalToGlobalBndMap();
 
                    // Global to local for linear solver (different from above)
                    Array<OneD, int> LocToGlo = m_vertLocToGloMap->GetLocalToGlobalMap();
 
                    // number of Dir coeffs in from full problem
                    int nDirFull = m_locToGloMap.lock()->GetNumGlobalDirBndCoeffs();
 
                    Array<OneD,NekDouble> In(nglo,0.0);
                    Array<OneD,NekDouble> Out(nglo,0.0);
 
                    // Gather rhs
                    for(i = 0; i < nloc; ++i)
                    {
                        val = LocToGloBnd[i];
                        if(val >= nDirFull)
                        {
                            In[LocToGlo[i]] = pInput[val-nDirFull];
                        }
                    }
 
                    // Do solve without enforcing any boundary conditions.
                    m_vertLinsys->SolveLinearSystem(
                        m_vertLocToGloMap->GetNumGlobalCoeffs(),
                        In,Out,m_vertLocToGloMap,
                        m_vertLocToGloMap->GetNumGlobalDirBndCoeffs());
 
 
                    if(pNonVertOutput != NullNekDouble1DArray)
                    {
                        ASSERTL1(pNonVertOutput.size() >= pOutput.size(),"Non Vert output is not of sufficient length");
                        Vmath::Vcopy(pOutput.size(),pNonVertOutput,1,pOutput,1);
                    }
                    else
                    {
                        //Copy input to output as a unit preconditioner on
                        //any other value
                        Vmath::Vcopy(pInput.size(),pInput,1,pOutput,1);
                    }
 
                    if(pVertForce != NullNekDouble1DArray)
                    {
                        Vmath::Zero(pVertForce.size(),pVertForce,1);
                        // Scatter back soln from linear solve
                        for(i = 0; i < nloc; ++i)
                        {
                            val = LocToGloBnd[i];
                            if(val >= nDirFull)
                            {
                                pOutput[val-nDirFull] = Out[LocToGlo[i]];
                                // copy vertex forcing into this vector
                                pVertForce[val-nDirFull] = In[LocToGlo[i]];
                            }
                        }
                    }
                    else
                    {
                        // Scatter back soln from linear solve
                        for(i = 0; i < nloc; ++i)
                        {
                            val = LocToGloBnd[i];
                            if(val >= nDirFull)
                            {
                                pOutput[val-nDirFull] = Out[LocToGlo[i]];
                            }
                        }
                    }
                }
                break;
            default:
                ASSERTL0(0,"Unsupported solver type");
                break;
        }
        }
    }
}