Advection3DHomogeneous1D.cpp

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///////////////////////////////////////////////////////////////////////////////
//
// File: Advection3DHomogeneous1D.cpp
//
// For more information, please see: http://www.nektar.info
//
// The MIT License
//
// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
// Department of Aeronautics, Imperial College London (UK), and Scientific
// Computing and Imaging Institute, University of Utah (USA).
//
// Permission is hereby granted, free of charge, to any person obtaining a
// copy of this software and associated documentation files (the "Software"),
// to deal in the Software without restriction, including without limitation
// the rights to use, copy, modify, merge, publish, distribute, sublicense,
// and/or sell copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following conditions:
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// The above copyright notice and this permission notice shall be included
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// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
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//
// Description: FR advection 3DHomogeneous1D class.
//
///////////////////////////////////////////////////////////////////////////////
 
#include <boost/core/ignore_unused.hpp>
 
#include <LibUtilities/Foundations/ManagerAccess.h>
#include <SolverUtils/Advection/Advection3DHomogeneous1D.h>
#include <iomanip>
#include <iostream>
 
using namespace std;
 
namespace Nektar
{
namespace SolverUtils
{
std::string Advection3DHomogeneous1D::type[] = {
    GetAdvectionFactory().RegisterCreatorFunction(
        "WeakDG3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRDG3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRDG3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRSD3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRHU3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRcmin3DHomogeneous1D", Advection3DHomogeneous1D::create),
    GetAdvectionFactory().RegisterCreatorFunction(
        "FRcinf3DHomogeneous1D", Advection3DHomogeneous1D::create)};
 
/**
 * @brief AdvectionFR uses the Flux Reconstruction (FR) approach to
 * compute the advection term. The implementation is only for segments,
 * quadrilaterals and hexahedra at the moment.
 *
 * \todo Extension to triangles, tetrahedra and other shapes.
 * (Long term objective)
 */
Advection3DHomogeneous1D::Advection3DHomogeneous1D(std::string advType)
    : m_advType(advType)
{
    // Strip trailing string "3DHomogeneous1D" to determine 2D advection
    // type, and create an advection object for the plane.
    string advName = advType.substr(0, advType.length() - 15);
    m_planeAdv     = GetAdvectionFactory().CreateInstance(advName, advName);
}
 
/**
 * @brief Initiliase Advection3DHomogeneous1D objects and store them
 * before starting the time-stepping.
 *
 * @param pSession  Pointer to session reader.
 * @param pFields   Pointer to fields.
 */
void Advection3DHomogeneous1D::v_InitObject(
    LibUtilities::SessionReaderSharedPtr pSession,
    Array<OneD, MultiRegions::ExpListSharedPtr> pFields)
{
    int nConvectiveFields = pFields.size();
 
    Array<OneD, MultiRegions::ExpListSharedPtr> pFields_plane0(
        nConvectiveFields);
 
    // Initialise the plane advection object.
    for (int i = 0; i < nConvectiveFields; ++i)
    {
        pFields_plane0[i] = pFields[i]->GetPlane(0);
    }
    m_planeAdv->InitObject(pSession, pFields_plane0);
 
    m_numPoints      = pFields[0]->GetTotPoints();
    m_planes         = pFields[0]->GetZIDs();
    m_numPlanes      = m_planes.size();
    m_numPointsPlane = m_numPoints / m_numPlanes;
 
    // Set Riemann solver and flux vector callback for this plane.
    m_planeAdv->SetRiemannSolver(m_riemann);
    m_planeAdv->SetFluxVector(&Advection3DHomogeneous1D::ModifiedFluxVector,
                              this);
    m_planeCounter = 0;
 
    // Override Riemann solver scalar and vector callbacks.
    map<string, RSScalarFuncType> scalars = m_riemann->GetScalars();
    map<string, RSVecFuncType> vectors    = m_riemann->GetVectors();
 
    for (auto &it1 : scalars)
    {
        std::shared_ptr<HomoRSScalar> tmp =
            MemoryManager<HomoRSScalar>::AllocateSharedPtr(it1.second,
                                                           m_numPlanes);
        m_riemann->SetScalar(it1.first, &HomoRSScalar::Exec, tmp);
    }
 
    for (auto &it2 : vectors)
    {
        std::shared_ptr<HomoRSVector> tmp =
            MemoryManager<HomoRSVector>::AllocateSharedPtr(
                it2.second, m_numPlanes, it2.first);
        m_riemann->SetVector(it2.first, &HomoRSVector::Exec, tmp);
    }
 
    m_fluxVecStore =
        Array<OneD, Array<OneD, Array<OneD, NekDouble>>>(nConvectiveFields);
 
    // Set up storage for flux vector.
    for (int i = 0; i < nConvectiveFields; ++i)
    {
        m_fluxVecStore[i] = Array<OneD, Array<OneD, NekDouble>>(3);
        for (int j = 0; j < 3; ++j)
        {
            m_fluxVecStore[i][j] = Array<OneD, NekDouble>(m_numPoints);
        }
    }
 
    m_fluxVecPlane =
        Array<OneD, Array<OneD, Array<OneD, Array<OneD, NekDouble>>>>(
            m_numPlanes);
    m_fieldsPlane =
        Array<OneD, MultiRegions::ExpListSharedPtr>(nConvectiveFields);
    m_inarrayPlane  = Array<OneD, Array<OneD, NekDouble>>(nConvectiveFields);
    m_outarrayPlane = Array<OneD, Array<OneD, NekDouble>>(nConvectiveFields);
    m_planePos      = Array<OneD, unsigned int>(m_numPlanes);
    m_advVelPlane   = Array<OneD, Array<OneD, NekDouble>>(3);
 
    // Set up memory reference which links fluxVecPlane to fluxVecStore.
    for (int i = 0; i < m_numPlanes; ++i)
    {
        m_planePos[i] = i * m_numPointsPlane;
        m_fluxVecPlane[i] =
            Array<OneD, Array<OneD, Array<OneD, NekDouble>>>(nConvectiveFields);
 
        for (int j = 0; j < nConvectiveFields; ++j)
        {
            m_fluxVecPlane[i][j] = Array<OneD, Array<OneD, NekDouble>>(3);
            for (int k = 0; k < 3; ++k)
            {
                m_fluxVecPlane[i][j][k] = Array<OneD, NekDouble>(
                    m_numPointsPlane, m_fluxVecStore[j][k] + m_planePos[i]);
            }
        }
    }
}
 
/**
 * @brief Compute the advection operator for a given input @a inarray
 * and put the result in @a outarray.
 *
 * @param nConvectiveFields   Number of fields to advect.
 * @param fields              Pointer to fields.
 * @param advVel              Advection velocities.
 * @param inarray             Input which will be advected.
 * @param outarray            Computed advection.
 */
void Advection3DHomogeneous1D::v_Advect(
    const int nConvectiveFields,
    const Array<OneD, MultiRegions::ExpListSharedPtr> &fields,
    const Array<OneD, Array<OneD, NekDouble>> &advVel,
    const Array<OneD, Array<OneD, NekDouble>> &inarray,
    Array<OneD, Array<OneD, NekDouble>> &outarray, const NekDouble &time,
    const Array<OneD, Array<OneD, NekDouble>> &pFwd,
    const Array<OneD, Array<OneD, NekDouble>> &pBwd)
{
    boost::ignore_unused(pFwd, pBwd);
 
    Array<OneD, NekDouble> tmp(m_numPoints), tmp2;
    int nVel = advVel.size();
 
    // Call solver's flux vector function to compute the flux vector on
    // the entire domain.
    m_fluxVector(inarray, m_fluxVecStore);
 
    // Loop over each plane.
    for (int i = 0; i < m_numPlanes; ++i)
    {
        // Set up memory references for fields, inarray and outarray for
        // this plane.
        for (int j = 0; j < nConvectiveFields; ++j)
        {
            m_fieldsPlane[j]  = fields[j]->GetPlane(i);
            m_inarrayPlane[j] = Array<OneD, NekDouble>(
                m_numPointsPlane, tmp2 = inarray[j] + m_planePos[i]);
            m_outarrayPlane[j] = Array<OneD, NekDouble>(
                m_numPointsPlane, tmp2 = outarray[j] + m_planePos[i]);
        }
 
        for (int j = 0; j < nVel; ++j)
        {
            if (advVel[j].size() != 0)
            {
                m_advVelPlane[j] = Array<OneD, NekDouble>(
                    m_numPointsPlane, tmp2 = advVel[j] + m_planePos[i]);
            }
        }
 
        // Compute advection term for this plane.
        m_planeAdv->Advect(nConvectiveFields, m_fieldsPlane, m_advVelPlane,
                           m_inarrayPlane, m_outarrayPlane, time);
    }
 
    // Calculate Fourier derivative and add to final result.
    for (int i = 0; i < nConvectiveFields; ++i)
    {
        fields[0]->PhysDeriv(2, m_fluxVecStore[i][2], tmp);
 
        Vmath::Vadd(m_numPoints, outarray[i], 1, tmp, 1, outarray[i], 1);
    }
}
 
/**
 *
 */
void Advection3DHomogeneous1D::ModifiedFluxVector(
    const Array<OneD, Array<OneD, NekDouble>> &inarray,
    Array<OneD, Array<OneD, Array<OneD, NekDouble>>> &outarray)
{
    boost::ignore_unused(inarray);
 
    // Return section of flux vector for this plane.
    outarray = m_fluxVecPlane[m_planeCounter];
 
    // Increment the plane counter.
    m_planeCounter = (m_planeCounter + 1) % m_numPlanes;
}
} // namespace SolverUtils
} // namespace Nektar