Vmath Namespace Reference

Namespaces
namespace	SIMD

Functions
template<class T >
void	Fill (int n, const T alpha, T *x, const int incx)
	Fill a vector with a constant value. More...
template void	Fill (int n, const Nektar::NekDouble alpha, Nektar::NekDouble *x, const int incx)
template void	Fill (int n, const Nektar::NekSingle alpha, Nektar::NekSingle *x, const int incx)
template<class T >
T	ran2 (long *idum)
	Generates a number from ~Normal(0,1) More...
template Nektar::NekDouble	ran2 (long *idum)
template<class T >
void	FillWhiteNoise (int n, const T eps, T *x, const int incx, int outseed)
	Fills a vector with white noise. More...
template void	FillWhiteNoise (int n, const Nektar::NekDouble eps, Nektar::NekDouble *x, const int incx, int outseed)
template void	FillWhiteNoise (int n, const Nektar::NekSingle eps, Nektar::NekSingle *x, const int incx, int outseed)
template<class T >
void	Vmul (int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	Multiply vector z = x*y. More...
template void	Vmul (int n, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vmul (int n, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Smul (int n, const T alpha, const T *x, const int incx, T *y, const int incy)
	Scalar multiply y = alpha*x. More...
template void	Smul (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Smul (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vdiv (int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	Multiply vector z = x/y. More...
template void	Vdiv (int n, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vdiv (int n, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Sdiv (int n, const T alpha, const T *x, const int incx, T *y, const int incy)
	Scalar multiply y = alpha/x. More...
template void	Sdiv (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Sdiv (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vadd (int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	Add vector z = x+y. More...
template void	Vadd (int n, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vadd (int n, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Sadd (int n, const T alpha, const T *x, const int incx, T *y, const int incy)
	Add scalar y = alpha + x. More...
template void	Sadd (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Sadd (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vsub (int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	Subtract vector z = x-y. More...
template void	Vsub (int n, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vsub (int n, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Ssub (int n, const T alpha, const T *x, const int incx, T *y, const int incy)
	Substract vector y = alpha - x. More...
template void	Ssub (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Ssub (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Zero (int n, T *x, const int incx)
	Zero vector. More...
template void	Zero (int n, Nektar::NekDouble *x, const int incx)
template void	Zero (int n, Nektar::NekSingle *x, const int incx)
template void	Zero (int n, int *x, const int incx)
template void	Zero (int n, long *x, const int incx)
template<class T >
void	Neg (int n, T *x, const int incx)
	Negate x = -x. More...
template void	Neg (int n, Nektar::NekDouble *x, const int incx)
template void	Neg (int n, Nektar::NekSingle *x, const int incx)
template<class T >
void	Vsqrt (int n, const T *x, const int incx, T *y, const int incy)
	sqrt y = sqrt(x) More...
template void	Vsqrt (int n, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Vsqrt (int n, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vabs (int n, const T *x, const int incx, T *y, const int incy)
	vabs: y = |x| More...
template void	Vabs (int n, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Vabs (int n, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vvtvp (int n, const T *w, const int incw, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	vvtvp (vector times vector plus vector): z = w*x + y More...
template void	Vvtvp (int n, const Nektar::NekDouble *w, const int incw, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vvtvp (int n, const Nektar::NekSingle *w, const int incw, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Vvtvm (int n, const T *w, const int incw, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	vvtvm (vector times vector minus vector): z = w*x - y More...
template void	Vvtvm (int n, const Nektar::NekDouble *w, const int incw, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Vvtvm (int n, const Nektar::NekSingle *w, const int incw, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Svtvp (int n, const T alpha, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	svtvp (scalar times vector plus vector): z = alpha*x + y More...
template void	Svtvp (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Svtvp (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Svtvm (int n, const T alpha, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
	svtvm (scalar times vector minus vector): z = alpha*x - y More...
template void	Svtvm (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, const int incx, const Nektar::NekDouble *y, const int incy, Nektar::NekDouble *z, const int incz)
template void	Svtvm (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, const int incx, const Nektar::NekSingle *y, const int incy, Nektar::NekSingle *z, const int incz)
template<class T >
void	Vvtvvtp (int n, const T *v, int incv, const T *w, int incw, const T *x, int incx, const T *y, int incy, T *z, int incz)
	vvtvvtp (vector times vector plus vector times vector): More...
template void	Vvtvvtp (int n, const Nektar::NekDouble *v, int incv, const Nektar::NekDouble *w, int incw, const Nektar::NekDouble *x, int incx, const Nektar::NekDouble *y, int incy, Nektar::NekDouble *z, int incz)
template void	Vvtvvtp (int n, const Nektar::NekSingle *v, int incv, const Nektar::NekSingle *w, int incw, const Nektar::NekSingle *x, int incx, const Nektar::NekSingle *y, int incy, Nektar::NekSingle *z, int incz)
template<class T >
void	Vvtvvtm (int n, const T *v, int incv, const T *w, int incw, const T *x, int incx, const T *y, int incy, T *z, int incz)
	vvtvvtm (vector times vector minus vector times vector): More...
template void	Vvtvvtm (int n, const Nektar::NekDouble *v, int incv, const Nektar::NekDouble *w, int incw, const Nektar::NekDouble *x, int incx, const Nektar::NekDouble *y, int incy, Nektar::NekDouble *z, int incz)
template void	Vvtvvtm (int n, const Nektar::NekSingle *v, int incv, const Nektar::NekSingle *w, int incw, const Nektar::NekSingle *x, int incx, const Nektar::NekSingle *y, int incy, Nektar::NekSingle *z, int incz)
template<class T >
void	Svtsvtp (int n, const T alpha, const T *x, int incx, const T beta, const T *y, int incy, T *z, int incz)
	svtvvtp (scalar times vector plus scalar times vector): More...
template void	Svtsvtp (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *x, int incx, const Nektar::NekDouble beta, const Nektar::NekDouble *y, int incy, Nektar::NekDouble *z, int incz)
template void	Svtsvtp (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *x, int incx, const Nektar::NekSingle beta, const Nektar::NekSingle *y, int incy, Nektar::NekSingle *z, int incz)
template<class T >
void	Vstvpp (int n, const T alpha, const T *v, int incv, const T *w, int incw, const T *x, int incx, T *z, int incz)
	Vstvpp (scalar times vector plus vector plus vector): More...
template void	Vstvpp (int n, const Nektar::NekDouble alpha, const Nektar::NekDouble *v, int incv, const Nektar::NekDouble *w, int incw, const Nektar::NekDouble *x, int incx, Nektar::NekDouble *z, int incz)
template void	Vstvpp (int n, const Nektar::NekSingle alpha, const Nektar::NekSingle *v, int incv, const Nektar::NekSingle *w, int incw, const Nektar::NekSingle *x, int incx, Nektar::NekSingle *z, int incz)
template<class T >
void	Gathr (int n, const T *sign, const T *x, const int *y, T *z)
	Gather vector z[i] = sign[i]*x[y[i]]. More...
template void	Gathr (int n, const Nektar::NekDouble *sign, const Nektar::NekDouble *x, const int *y, Nektar::NekDouble *z)
template void	Gathr (int n, const Nektar::NekSingle *sign, const Nektar::NekSingle *x, const int *y, Nektar::NekSingle *z)
template<class T >
void	Scatr (int n, const T *x, const int *y, T *z)
	Scatter vector z[y[i]] = x[i]. More...
template void	Scatr (int n, const Nektar::NekDouble *x, const int *y, Nektar::NekDouble *z)
template void	Scatr (int n, const Nektar::NekSingle *x, const int *y, Nektar::NekSingle *z)
template<class T >
void	Scatr (int n, const T *sign, const T *x, const int *y, T *z)
	Scatter vector z[y[i]] = sign[i]*x[i]. More...
template void	Scatr (int n, const Nektar::NekDouble *sign, const Nektar::NekDouble *x, const int *y, Nektar::NekDouble *z)
template void	Scatr (int n, const Nektar::NekSingle *sign, const Nektar::NekSingle *x, const int *y, Nektar::NekSingle *z)
template<class T >
void	Assmb (int n, const T *x, const int *y, T *z)
	Assemble z[y[i]] += x[i]; z should be zero'd first. More...
template void	Assmb (int n, const Nektar::NekDouble *x, const int *y, Nektar::NekDouble *z)
template void	Assmb (int n, const Nektar::NekSingle *x, const int *y, Nektar::NekSingle *z)
template<class T >
void	Assmb (int n, const T *sign, const T *x, const int *y, T *z)
	Assemble z[y[i]] += sign[i]*x[i]; z should be zero'd first. More...
template void	Assmb (int n, const Nektar::NekDouble *sign, const Nektar::NekDouble *x, const int *y, Nektar::NekDouble *z)
template void	Assmb (int n, const Nektar::NekSingle *sign, const Nektar::NekSingle *x, const int *y, Nektar::NekSingle *z)
template<class T >
T	Vsum (int n, const T *x, const int incx)
	Subtract return sum(x) More...
template Nektar::NekDouble	Vsum (int n, const Nektar::NekDouble *x, const int incx)
template Nektar::NekSingle	Vsum (int n, const Nektar::NekSingle *x, const int incx)
template int	Vsum (int n, const int *x, const int incx)
template<class T >
int	Imax (int n, const T *x, const int incx)
	Return the index of the maximum element in x. More...
template int	Imax (int n, const Nektar::NekDouble *x, const int incx)
template int	Imax (int n, const Nektar::NekSingle *x, const int incx)
template int	Imax (int n, const int *x, const int incx)
template<class T >
T	Vmax (int n, const T *x, const int incx)
	Return the maximum element in x – called vmax to avoid conflict with max. More...
template Nektar::NekDouble	Vmax (int n, const Nektar::NekDouble *x, const int incx)
template Nektar::NekSingle	Vmax (int n, const Nektar::NekSingle *x, const int incx)
template int	Vmax (int n, const int *x, const int incx)
template<class T >
int	Iamax (int n, const T *x, const int incx)
	Return the index of the maximum absolute element in x. More...
template int	Iamax (int n, const Nektar::NekDouble *x, const int incx)
template int	Iamax (int n, const Nektar::NekSingle *x, const int incx)
template<class T >
T	Vamax (int n, const T *x, const int incx)
	Return the maximum absolute element in x called vamax to avoid conflict with max. More...
template Nektar::NekDouble	Vamax (int n, const Nektar::NekDouble *x, const int incx)
template Nektar::NekSingle	Vamax (int n, const Nektar::NekSingle *x, const int incx)
template<class T >
int	Imin (int n, const T *x, const int incx)
	Return the index of the minimum element in x. More...
template int	Imin (int n, const Nektar::NekDouble *x, const int incx)
template int	Imin (int n, const Nektar::NekSingle *x, const int incx)
template int	Imin (int n, const int *x, const int incx)
template<class T >
T	Vmin (int n, const T *x, const int incx)
	Return the minimum element in x - called vmin to avoid conflict with min. More...
template Nektar::NekDouble	Vmin (int n, const Nektar::NekDouble *x, const int incx)
template Nektar::NekSingle	Vmin (int n, const Nektar::NekSingle *x, const int incx)
template int	Vmin (int n, const int *x, const int incx)
template<class T >
int	Nnan (int n, const T *x, const int incx)
	Return number of NaN elements of x. More...
template int	Nnan (int n, const Nektar::NekDouble *x, const int incx)
template int	Nnan (int n, const Nektar::NekSingle *x, const int incx)
template int	Nnan (int n, const int *x, const int incx)
template<class T >
T	Dot (int n, const T *w, const T *x)
	dot (vector times vector): z = w*x More...
template Nektar::NekDouble	Dot (int n, const Nektar::NekDouble *w, const Nektar::NekDouble *x)
template Nektar::NekSingle	Dot (int n, const Nektar::NekSingle *w, const Nektar::NekSingle *x)
template<class T >
T	Dot (int n, const T *w, const int incw, const T *x, const int incx)
	dot (vector times vector): z = w*x More...
template Nektar::NekDouble	Dot (int n, const Nektar::NekDouble *w, const int incw, const Nektar::NekDouble *x, const int incx)
template Nektar::NekSingle	Dot (int n, const Nektar::NekSingle *w, const int incw, const Nektar::NekSingle *x, const int incx)
template<class T >
T	Dot2 (int n, const T *w, const T *x, const int *y)
	dot2 (vector times vector times vector): z = w*x*y More...
template Nektar::NekDouble	Dot2 (int n, const Nektar::NekDouble *w, const Nektar::NekDouble *x, const int *y)
template Nektar::NekSingle	Dot2 (int n, const Nektar::NekSingle *w, const Nektar::NekSingle *x, const int *y)
template<class T >
T	Dot2 (int n, const T *w, const int incw, const T *x, const int incx, const int *y, const int incy)
	dot2 (vector times vector times vector): z = w*x*y More...
template Nektar::NekDouble	Dot2 (int n, const Nektar::NekDouble *w, const int incw, const Nektar::NekDouble *x, const int incx, const int *y, const int incy)
template Nektar::NekSingle	Dot2 (int n, const Nektar::NekSingle *w, const int incw, const Nektar::NekSingle *x, const int incx, const int *y, const int incy)
template<typename T >
void	Vcopy (int n, const T *x, const int incx, T *y, const int incy)
template void	Vcopy (int n, const int *x, const int incx, int *y, const int incy)
template void	Vcopy (int n, const unsigned int *x, const int incx, unsigned int *y, const int incy)
template void	Vcopy (int n, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Vcopy (int n, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Reverse (int n, const T *x, const int incx, T *y, const int incy)
template void	Reverse (int n, const Nektar::NekDouble *x, const int incx, Nektar::NekDouble *y, const int incy)
template void	Reverse (int n, const Nektar::NekSingle *x, const int incx, Nektar::NekSingle *y, const int incy)
template<class T >
void	Vlog (int n, const T *x, const int incx, T *y, const int incy)
	log y = log(x) More...
template<class T >
void	Vexp (int n, const T *x, const int incx, T *y, const int incy)
	exp y = exp(x) More...
template<class T >
void	Vpow (int n, const T *x, const int incx, const T f, T *y, const int incy)
	pow y = pow(x, f) More...
template<class T , class I , typename = typename std::enable_if<std::is_floating_point<T>::value && std::is_integral<I>::value>::type>
void	Gathr (I n, const T *x, const I *y, T *z)
	Gather vector z[i] = x[y[i]]. More...
template<class T >
void	Fill (int n, const T alpha, Array< OneD, T > &x, const int incx)
	Fill a vector with a constant value. More...
template<class T >
void	FillWhiteNoise (int n, const T eps, Array< OneD, T > &x, const int incx, int outseed=9999)
template<class T >
void	Vmul (int n, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	Multiply vector z = x*y. More...
template<class T >
void	Vmul (int n, const Array< TwoD, NekDouble >::const_reference &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
template<class T >
void	Smul (int n, const T alpha, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	Scalar multiply y = alpha*x. More...
template<class T >
void	Vdiv (int n, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	Multiply vector z = x/y. More...
template<class T >
void	Sdiv (int n, const T alpha, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	Scalar multiply y = alpha/x. More...
template<class T >
void	Vadd (int n, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	Add vector z = x+y. More...
template<class T >
void	Sadd (int n, const T alpha, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	Add vector y = alpha + x. More...
template<class T >
void	Vsub (int n, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	Subtract vector z = x-y. More...
template<class T >
void	Ssub (int n, const T alpha, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	Add vector y = alpha - x. More...
template<class T >
void	Zero (int n, Array< OneD, T > &x, const int incx)
	Zero vector. More...
template<class T >
void	Neg (int n, Array< OneD, T > &x, const int incx)
	Negate x = -x. More...
template<class T >
void	Vlog (int n, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	log y = log(x) More...
template<class T >
void	Vexp (int n, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	exp y = exp(x) More...
template<class T >
void	Vpow (int n, const Array< OneD, const T > &x, const int incx, const T f, Array< OneD, T > &y, const int incy)
	pow y = pow(x, f) More...
template<class T >
void	Vsqrt (int n, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	sqrt y = sqrt(x) More...
template<class T >
void	Vabs (int n, const Array< OneD, const T > &x, const int incx, Array< OneD, T > &y, const int incy)
	vabs: y = |x| More...
template<class T >
void	Vvtvp (int n, const Array< OneD, const T > &w, const int incw, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	vvtvp (vector times vector plus vector): z = w*x + y More...
template<class T >
void	Vvtvp (int n, const Array< TwoD, NekDouble >::const_reference &w, const int incw, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	Vvtvp (vector times vector plus vector): z = w*x + y. More...
template<class T >
void	Vvtvm (int n, const Array< OneD, const T > &w, const int incw, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	vvtvm (vector times vector minus vector): z = w*x - y More...
template<class T >
void	Svtvp (int n, const T alpha, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	svtvp (scalar times vector plus vector): z = alpha*x + y More...
template<class T >
void	Svtvm (int n, const T alpha, const Array< OneD, const T > &x, const int incx, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	svtvm (scalar times vector minus vector): z = alpha*x - y More...
template<class T >
void	Vvtvvtp (int n, const Array< OneD, const T > &v, int incv, const Array< OneD, const T > &w, int incw, const Array< OneD, const T > &x, int incx, const Array< OneD, const T > &y, int incy, Array< OneD, T > &z, int incz)
	vvtvvtp (vector times vector plus vector times vector): z = v*w + x*y More...
template<class T >
void	Vvtvvtm (int n, const Array< OneD, const T > &v, int incv, const Array< OneD, const T > &w, int incw, const Array< OneD, const T > &x, int incx, const Array< OneD, const T > &y, int incy, Array< OneD, T > &z, int incz)
	vvtvvtm (vector times vector minus vector times vector): z = v*w - x*y More...
template<class T >
void	Svtsvtp (int n, const T alpha, const Array< OneD, const T > &x, const int incx, const T beta, const Array< OneD, const T > &y, const int incy, Array< OneD, T > &z, const int incz)
	svtsvtp (scalar times vector plus scalar times vector): z = alpha*x + beta*y More...
template<class T , class I , typename = typename std::enable_if<std::is_floating_point<T>::value && std::is_integral<I>::value>::type>
void	Gathr (I n, const Array< OneD, const T > &x, const Array< OneD, I > &y, Array< OneD, T > &z)
	Gather vector z[i] = x[y[i]]. More...
template<class T >
void	Scatr (int n, const Array< OneD, const T > &x, const Array< OneD, const int > &y, Array< OneD, T > &z)
	Scatter vector z[y[i]] = x[i]. More...
template<class T >
void	Assmb (int n, const Array< OneD, T > &x, const Array< OneD, int > &y, Array< OneD, T > &z)
	Assemble z[y[i]] += x[i]; z should be zero'd first. More...
template<class T >
T	Vsum (int n, const Array< OneD, const T > &x, const int incx)
	Subtract return sum(x) More...
template<class T >
int	Imax (int n, const Array< OneD, const T > &x, const int incx)
	Return the index of the maximum element in x. More...
template<class T >
T	Vmax (int n, const Array< OneD, const T > &x, const int incx)
	Return the maximum element in x – called vmax to avoid conflict with max. More...
template<class T >
int	Iamax (int n, const Array< OneD, const T > &x, const int incx)
	Return the index of the maximum absolute element in x. More...
template<class T >
T	Vamax (int n, const Array< OneD, const T > &x, const int incx)
	Return the maximum absolute element in x called vamax to avoid conflict with max. More...
template<class T >
int	Imin (int n, const Array< OneD, const T > &x, const int incx)
	Return the index of the minimum element in x. More...
template<class T >
T	Vmin (int n, const Array< OneD, const T > &x, const int incx)
	Return the minimum element in x - called vmin to avoid conflict with min. More...
template<class T >
int	Nnan (int n, const Array< OneD, const T > &x, const int incx)
	Return number of NaN elements of x. More...
template<class T >
T	Dot (int n, const Array< OneD, const T > &w, const Array< OneD, const T > &x)
	dot product More...
template<class T >
T	Dot (int n, const Array< OneD, const T > &w, const int incw, const Array< OneD, const T > &x, const int incx)
	dot product More...
template<class T >
T	Dot2 (int n, const Array< OneD, const T > &w, const Array< OneD, const T > &x, const Array< OneD, const int > &y)
	dot product More...
template<class T >
T	Ddot (int n, const Array< OneD, const T > &w, const int incw, const Array< OneD, const T > &x, const int incx, const Array< OneD, const int > &y, const int incy)
	dot product More...
template<class T >
void	Vcopy (int n, const Array< OneD, const T > &x, int incx, Array< OneD, T > &y, int const incy)
template<class T >
void	Reverse (int n, const Array< OneD, const T > &x, int incx, Array< OneD, T > &y, int const incy)

Function Documentation

Assmb() [1/7]

template<class T >

void Vmath::Assmb	(	int	n,
		const Array< OneD, T > &	x,
		const Array< OneD, int > &	y,
		Array< OneD, T > &	z
	)

Assemble z[y[i]] += x[i]; z should be zero'd first.

Definition at line 464 of file VmathArray.hpp.

{
    ASSERTL1(n <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Assmb(n, &x[0], &y[0], &z[0]);
}

References ASSERTL1, Assmb(), and Nektar::UnitTests::z().

Assmb() [2/7]

template void Vmath::Assmb	(	int	n,
		const Nektar::NekDouble *	sign,
		const Nektar::NekDouble *	x,
		const int *	y,
		Nektar::NekDouble *	z
	)

Assmb() [3/7]

template void Vmath::Assmb	(	int	n,
		const Nektar::NekDouble *	x,
		const int *	y,
		Nektar::NekDouble *	z
	)

Assmb() [4/7]

template void Vmath::Assmb	(	int	n,
		const Nektar::NekSingle *	sign,
		const Nektar::NekSingle *	x,
		const int *	y,
		Nektar::NekSingle *	z
	)

Assmb() [5/7]

template void Vmath::Assmb	(	int	n,
		const Nektar::NekSingle *	x,
		const int *	y,
		Nektar::NekSingle *	z
	)

Assmb() [6/7]

template<class T >

void Vmath::Assmb	(	int	n,
		const T *	sign,
		const T *	x,
		const int *	y,
		T *	z
	)

Assemble z[y[i]] += sign[i]*x[i]; z should be zero'd first.

Definition at line 872 of file Vmath.cpp.

{
    while (n--)
    {
        *(z + *(y++)) += *(sign++) * (*(x++));
    }
}

References sign, and Nektar::UnitTests::z().

Assmb() [7/7]

template<class T >

void Vmath::Assmb	(	int	n,
		const T *	x,
		const int *	y,
		T *	z
	)

Assemble z[y[i]] += x[i]; z should be zero'd first.

Definition at line 857 of file Vmath.cpp.

{
    while (n--)
    {
        *(z + *(y++)) += *(x++);
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::MultiRegions::LocTraceToTraceMap::AddLocTracesToField(), Nektar::MultiRegions::AssemblyMap::AssembleBnd(), Assmb(), Nektar::MultiRegions::AssemblyMap::PatchAssemble(), Nektar::MultiRegions::AssemblyMap::PrintStats(), Nektar::MultiRegions::AssemblyMapCG::v_Assemble(), and Nektar::MultiRegions::PreconditionerLowEnergy::v_BuildPreconditioner().

Ddot()

template<class T >

T Vmath::Ddot	(	int	n,
		const Array< OneD, const T > &	w,
		const int	incw,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const int > &	y,
		const int	incy
	)

dot product

Definition at line 581 of file VmathArray.hpp.

{
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    return Dot2(n, &w[0], incw, &x[0], incx, &y[0], incy);
}

References ASSERTL1, Dot2(), and Nektar::UnitTests::w().

Dot() [1/8]

template<class T >

T Vmath::Dot	(	int	n,
		const Array< OneD, const T > &	w,
		const Array< OneD, const T > &	x
	)

dot product

Definition at line 548 of file VmathArray.hpp.

{
    ASSERTL1(n <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Dot(n, &w[0], &x[0]);
}

References ASSERTL1, Dot(), and Nektar::UnitTests::w().

Dot() [2/8]

template<class T >

T Vmath::Dot	(	int	n,
		const Array< OneD, const T > &	w,
		const int	incw,
		const Array< OneD, const T > &	x,
		const int	incx
	)

dot product

Definition at line 558 of file VmathArray.hpp.

{
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Dot(n, &w[0], incw, &x[0], incx);
}

References ASSERTL1, Dot(), and Nektar::UnitTests::w().

Dot() [3/8]

template Nektar::NekDouble Vmath::Dot	(	int	n,
		const Nektar::NekDouble *	w,
		const int	incw,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Dot() [4/8]

template Nektar::NekDouble Vmath::Dot	(	int	n,
		const Nektar::NekDouble *	w,
		const Nektar::NekDouble *	x
	)

Dot() [5/8]

template Nektar::NekSingle Vmath::Dot	(	int	n,
		const Nektar::NekSingle *	w,
		const int	incw,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Dot() [6/8]

template Nektar::NekSingle Vmath::Dot	(	int	n,
		const Nektar::NekSingle *	w,
		const Nektar::NekSingle *	x
	)

Dot() [7/8]

template<class T >

T Vmath::Dot	(	int	n,
		const T *	w,
		const int	incw,
		const T *	x,
		const int	incx
	)

dot (vector times vector): z = w*x

dot product

Definition at line 1117 of file Vmath.cpp.

{
    T sum = 0;
 
    while (n--)
    {
        sum += (*w) * (*x);
        w += incw;
        x += incx;
    }
    return sum;
}

References Nektar::UnitTests::w().

Dot() [8/8]

template<class T >

T Vmath::Dot	(	int	n,
		const T *	w,
		const T *	x
	)

dot (vector times vector): z = w*x

dot product

Definition at line 1095 of file Vmath.cpp.

{
    T sum = 0;
 
    while (n--)
    {
        sum += (*w) * (*x);
        ++w;
        ++x;
    }
    return sum;
}

References Nektar::UnitTests::w().

Referenced by Nektar::StdRegions::StdExpansion::BaryEvaluate(), Nektar::FieldUtils::ProcessWallNormalData::BndElmtContainsPoint(), Nektar::CFSImplicit::CalcRefValues(), Nektar::FieldUtils::ProcessPhiFromFile::CheckHit(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterCGLoc::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGMRES(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGmresRestart(), Dot(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_small(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_test(), Nektar::FieldUtils::ProcessPhiFromFile::FindShortestDist(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GenPntwiseBodyFittedCoordSys(), Nektar::VariableConverter::GetSensor(), Nektar::FieldUtils::ProcessWallNormalData::isInProjectedArea2D(), Nektar::FieldUtils::ProcessWallNormalData::isInProjectedArea3D(), Nektar::CFSImplicit::MatrixMultiplyMatrixFreeCoeff(), Nektar::SpatialDomains::Geometry3D::NewtonIterationForLocCoord(), Nektar::FieldUtils::ProcessWallNormalData::ProjectPoint(), Nektar::FieldUtils::ProcessWallNormalData::ProjectVertices(), Nektar::LibUtilities::NekLinSysIter::Set_Rhs_Magnitude(), Nektar::LibUtilities::NekSys::v_ConvergenceCheck(), Nektar::LibUtilities::NekNonlinSysNewton::v_ConvergenceCheck(), Nektar::FieldUtils::ProcessBodyFittedVelocity::v_Process(), Nektar::FieldUtils::ProcessWallNormalData::v_Process(), and Nektar::FieldUtils::ProcessPhiFromFile::Vector2edge().

Dot2() [1/7]

template<class T >

T Vmath::Dot2	(	int	n,
		const Array< OneD, const T > &	w,
		const Array< OneD, const T > &	x,
		const Array< OneD, const int > &	y
	)

dot product

Definition at line 569 of file VmathArray.hpp.

{
    ASSERTL1(n <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= y.size() + y.GetOffset(), "Array out of bounds");
 
    return Dot2(n, &w[0], &x[0], &y[0]);
}

References ASSERTL1, Dot2(), and Nektar::UnitTests::w().

Dot2() [2/7]

template Nektar::NekDouble Vmath::Dot2	(	int	n,
		const Nektar::NekDouble *	w,
		const int	incw,
		const Nektar::NekDouble *	x,
		const int	incx,
		const int *	y,
		const int	incy
	)

Dot2() [3/7]

template Nektar::NekDouble Vmath::Dot2	(	int	n,
		const Nektar::NekDouble *	w,
		const Nektar::NekDouble *	x,
		const int *	y
	)

Dot2() [4/7]

template Nektar::NekSingle Vmath::Dot2	(	int	n,
		const Nektar::NekSingle *	w,
		const int	incw,
		const Nektar::NekSingle *	x,
		const int	incx,
		const int *	y,
		const int	incy
	)

Dot2() [5/7]

template Nektar::NekSingle Vmath::Dot2	(	int	n,
		const Nektar::NekSingle *	w,
		const Nektar::NekSingle *	x,
		const int *	y
	)

Dot2() [6/7]

template<class T >

T Vmath::Dot2	(	int	n,
		const T *	w,
		const int	incw,
		const T *	x,
		const int	incx,
		const int *	y,
		const int	incy
	)

dot2 (vector times vector times vector): z = w*x*y

dot product

Definition at line 1167 of file Vmath.cpp.

{
    T sum = 0;
 
    while (n--)
    {
        sum += (*y == 1 ? (*w) * (*x) : 0.0);
        w += incw;
        x += incx;
        y += incy;
    }
    return sum;
}

References Nektar::UnitTests::w().

Dot2() [7/7]

template<class T >

T Vmath::Dot2	(	int	n,
		const T *	w,
		const T *	x,
		const int *	y
	)

dot2 (vector times vector times vector): z = w*x*y

dot product

Definition at line 1142 of file Vmath.cpp.

{
    T sum = 0;
 
    while (n--)
    {
        sum += (*y == 1 ? (*w) * (*x) : 0);
        ++w;
        ++x;
        ++y;
    }
    return sum;
}

References Nektar::UnitTests::w().

Referenced by Ddot(), Nektar::LibUtilities::NekLinSysIterGMRES::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterCG::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGMRES(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGmresRestart(), Nektar::MultiRegions::GlobalLinSysIterative::DoProjection(), Dot2(), Nektar::LibUtilities::NekLinSysIter::Set_Rhs_Magnitude(), Nektar::MultiRegions::GlobalLinSysIterative::Set_Rhs_Magnitude(), and Nektar::MultiRegions::GlobalLinSysIterative::UpdateKnownSolutions().

Fill() [1/4]

template void Vmath::Fill	(	int	n,
		const Nektar::NekDouble	alpha,
		Nektar::NekDouble *	x,
		const int	incx
	)

Fill() [2/4]

template void Vmath::Fill	(	int	n,
		const Nektar::NekSingle	alpha,
		Nektar::NekSingle *	x,
		const int	incx
	)

Fill() [3/4]

template<class T >

void Vmath::Fill	(	int	n,
		const T	alpha,
		Array< OneD, T > &	x,
		const int	incx
	)

Fill a vector with a constant value.

Definition at line 49 of file VmathArray.hpp.

{
 
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Out of bounds");
 
    Fill(n, alpha, &x[0], incx);
}

References ASSERTL1, and Fill().

Fill() [4/4]

template<class T >

void Vmath::Fill	(	int	n,
		const T	alpha,
		T *	x,
		const int	incx
	)

Fill a vector with a constant value.

Definition at line 43 of file Vmath.cpp.

{
    while (n--)
    {
        *x = alpha;
        x += incx;
    }
}

Referenced by Nektar::CFSImplicit::AddMatNSBlkDiagVol(), Nektar::SpatialDomains::GeomFactors::Adjoint(), Nektar::SolverUtils::AdvectionWeakDG::AdvectCoeffs(), Nektar::SolverUtils::RiemannSolver::CalcFluxJacobian(), Nektar::VortexWaveInteraction::CalcL2ToLinfPressure(), Nektar::MultiRegions::LocTraceToTraceMap::CalcLocTracePhysToTraceIDMap_2D(), Nektar::MultiRegions::LocTraceToTraceMap::CalcLocTracePhysToTraceIDMap_3D(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SpatialDomains::GeomFactors::ComputeMovingFrames(), Nektar::SpatialDomains::GeomFactors::ComputePrincipleDirection(), Nektar::ForcingMovingBody::EvaluateStructDynModel(), Nektar::MMFSWE::EvaluateWaterDepth(), Fill(), Nektar::CFSImplicit::Fill1DArrayOfBlkDiagonalMat(), Nektar::NavierStokesCFE::GetDivCurlFromDvelT(), Nektar::Collections::CoalescedGeomData::GetJacWithStdWeights(), Nektar::FieldUtils::ProcessQualityMetric::GetQ(), Nektar::VariableConverter::GetSensor(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), main(), Nektar::SolverUtils::DriverArnoldi::MaskInit(), Nektar::PreconCfsBRJ::MinusOffDiag2Rhs(), Nektar::CFSImplicit::MultiplyElmtInvMassPlusSource(), Nektar::NekMatrix< DataType, StandardMatrixTag >::operator=(), Nektar::FieldUtils::OutputVtk::OutputFromExpLowOrder(), Nektar::NavierStokesCFE::SpecialBndTreat(), Nektar::SubSteppingExtrapolate::SubStepExtrapolateField(), Nektar::VelocityCorrectionScheme::SVVVarDiffCoeff(), Nektar::LocalRegions::HexExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::QuadExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::LocalRegions::SegExp::v_ComputeTraceNormal(), Nektar::LinearElasticSystem::v_DoSolve(), Nektar::MultiRegions::DisContField::v_EvaluateBoundaryConditions(), Nektar::MultiRegions::DisContField::v_FillBwdWithBwdWeight(), Nektar::StdRegions::StdTriExp::v_FillMode(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::StdRegions::StdQuadExp::v_GetCoords(), Nektar::StdRegions::StdTriExp::v_GetCoords(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList2DHomogeneous2D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous2D::v_GetCoords(), Nektar::IncNavierStokes::v_GetDensity(), Nektar::NavierStokesImplicitCFE::v_GetFluxDerivJacDirctn(), Nektar::GlobalMapping::MappingTranslation::v_GetJacobian(), Nektar::GlobalMapping::MappingXofZ::v_GetJacobian(), Nektar::GlobalMapping::MappingXYofZ::v_GetJacobian(), Nektar::MMFDiffusion::v_InitObject(), Nektar::DiffusionLDGNS::v_InitObject(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::FieldUtils::ProcessAddCompositeID::v_Process(), Nektar::FieldUtils::ProcessCFL::v_Process(), Nektar::FieldUtils::ProcessJacobianEnergy::v_Process(), Nektar::FieldUtils::ProcessNumModes::v_Process(), Nektar::FieldUtils::ProcessPowerSpectrum::v_Process(), Nektar::CellModelAlievPanfilov::v_SetInitialConditions(), Nektar::CourtemancheRamirezNattel98::v_SetInitialConditions(), Nektar::FentonKarma::v_SetInitialConditions(), Nektar::CellModelFitzHughNagumo::v_SetInitialConditions(), Nektar::Fox02::v_SetInitialConditions(), Nektar::LuoRudy91::v_SetInitialConditions(), Nektar::TenTusscher06::v_SetInitialConditions(), Nektar::Winslow99::v_SetInitialConditions(), Nektar::LocalRegions::HexExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PrismExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PyrExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::QuadExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TetExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TriExp::v_SVVLaplacianFilter(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_WriteVtkPieceHeader(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_WriteVtkPieceHeader(), and Nektar::AcousticSystem::WhiteNoiseBC().

FillWhiteNoise() [1/4]

template void Vmath::FillWhiteNoise	(	int	n,
		const Nektar::NekDouble	eps,
		Nektar::NekDouble *	x,
		const int	incx,
		int	outseed
	)

FillWhiteNoise() [2/4]

template void Vmath::FillWhiteNoise	(	int	n,
		const Nektar::NekSingle	eps,
		Nektar::NekSingle *	x,
		const int	incx,
		int	outseed
	)

FillWhiteNoise() [3/4]

template<class T >

void Vmath::FillWhiteNoise	(	int	n,
		const T	eps,
		Array< OneD, T > &	x,
		const int	incx,
		int	outseed = 9999
	)

Definition at line 58 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Out of bounds");
 
    FillWhiteNoise(n, eps, &x[0], incx, outseed);
}

References ASSERTL1, and FillWhiteNoise().

FillWhiteNoise() [4/4]

template<class T >

void Vmath::FillWhiteNoise	(	int	n,
		const T	eps,
		T *	x,
		const int	incx,
		int	outseed
	)

Fills a vector with white noise.

Definition at line 153 of file Vmath.cpp.

{
#ifdef NEKTAR_USE_THREAD_SAFETY
    // Protect the static vars here and in ran2
    boost::mutex::scoped_lock l(mutex);
#endif
 
    // Define static variables for generating random numbers
    static int iset = 0;
    static T gset;
    static long seed = 0;
 
    // Bypass seed if outseed was specified
    if (outseed != 9999)
    {
        seed = long(outseed);
    }
 
    while (n--)
    {
        T fac, rsq, v1, v2;
 
        if (iset == 0)
        {
            do
            {
                v1  = 2.0 * ran2<T>(&seed) - 1.0;
                v2  = 2.0 * ran2<T>(&seed) - 1.0;
                rsq = v1 * v1 + v2 * v2;
            } while (rsq >= 1.0 || rsq == 0.0);
            fac  = sqrt(-2.0 * log(rsq) / rsq);
            gset = v1 * fac;
            iset = 1;
            *x   = eps * v2 * fac;
        }
        else
        {
            iset = 0;
            *x   = eps * gset;
        }
        x += incx;
    }
}

References tinysimd::log(), and tinysimd::sqrt().

Referenced by FillWhiteNoise(), Nektar::SolverUtils::ForcingNoise::v_Apply(), Nektar::SolverUtils::DriverModifiedArnoldi::v_Execute(), Nektar::SolverUtils::ForcingNoise::v_InitObject(), and Nektar::CompressibleFlowSystem::v_SetInitialConditions().

Gathr() [1/5]

template<class T , class I , typename = typename std::enable_if<std::is_floating_point<T>::value && std::is_integral<I>::value>::type>

void Vmath::Gathr	(	I	n,
		const Array< OneD, const T > &	x,
		const Array< OneD, I > &	y,
		Array< OneD, T > &	z
	)

Gather vector z[i] = x[y[i]].

Definition at line 438 of file VmathArray.hpp.

{
    ASSERTL1(n <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    SIMD::Gathr(n, &x[0], &y[0], &z[0]);
#else
    Gathr(n, &x[0], &y[0], &z[0]);
#endif
}

References ASSERTL1, Vmath::SIMD::Gathr(), Gathr(), and Nektar::UnitTests::z().

Gathr() [2/5]

template<class T , class I , typename = typename std::enable_if<std::is_floating_point<T>::value && std::is_integral<I>::value>::type>

void Vmath::Gathr	(	I	n,
		const T *	x,
		const I *	y,
		T *	z
	)

Gather vector z[i] = x[y[i]].

Definition at line 219 of file Vmath.hpp.

{
    while (n--)
    {
        *z++ = *(x + *y++);
    }
    return;
}

References Nektar::UnitTests::z().

Gathr() [3/5]

template void Vmath::Gathr	(	int	n,
		const Nektar::NekDouble *	sign,
		const Nektar::NekDouble *	x,
		const int *	y,
		Nektar::NekDouble *	z
	)

Gathr() [4/5]

template void Vmath::Gathr	(	int	n,
		const Nektar::NekSingle *	sign,
		const Nektar::NekSingle *	x,
		const int *	y,
		Nektar::NekSingle *	z
	)

Gathr() [5/5]

template<class T >

void Vmath::Gathr	(	int	n,
		const T *	sign,
		const T *	x,
		const int *	y,
		T *	z
	)

Gather vector z[i] = sign[i]*x[y[i]].

Definition at line 800 of file Vmath.cpp.

{
    while (n--)
    {
        *z++ = *(sign++) * (*(x + *y++));
    }
    return;
}

References sign, and Nektar::UnitTests::z().

Referenced by Nektar::MultiRegions::LocTraceToTraceMap::CalcLocTracePhysToTraceIDMap_2D(), Nektar::MultiRegions::LocTraceToTraceMap::CalcLocTracePhysToTraceIDMap_3D(), Nektar::MultiRegions::LocTraceToTraceMap::FwdLocTracesFromField(), Gathr(), Nektar::MultiRegions::AssemblyMap::GlobalToLocalBnd(), Nektar::MultiRegions::AssemblyMap::GlobalToLocalBndWithoutSign(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocEdgesToTraceTranspose(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocFacesToTraceTranspose(), Nektar::MultiRegions::LocTraceToTraceMap::InterpTraceToLocEdges(), Nektar::MultiRegions::LocTraceToTraceMap::InterpTraceToLocFaces(), Nektar::MultiRegions::LocTraceToTraceMap::InterpTraceToLocTrace(), Nektar::MultiRegions::AssemblyMap::LocalToLocalBnd(), Nektar::MultiRegions::AssemblyMap::LocalToLocalInt(), Nektar::MultiRegions::LocTraceToTraceMap::LocTracesFromField(), main(), Nektar::MultiRegions::AssemblyMap::PatchGlobalToLocal(), Nektar::MultiRegions::LocTraceToTraceMap::ReshuffleLocTracesForInterp(), Nektar::LocalRegions::Expansion3D::v_GetTracePhysVals(), and Nektar::MultiRegions::AssemblyMapCG::v_GlobalToLocal().

Iamax() [1/4]

template<class T >

int Vmath::Iamax	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the index of the maximum absolute element in x.

Definition at line 503 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Iamax(n, &x[0], incx);
}

References ASSERTL1, and Iamax().

Iamax() [2/4]

template int Vmath::Iamax	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Iamax() [3/4]

template int Vmath::Iamax	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Iamax() [4/4]

template<class T >

int Vmath::Iamax	(	int	n,
		const T *	x,
		const int	incx
	)

Return the index of the maximum absolute element in x.

Definition at line 966 of file Vmath.cpp.

{
 
    int i, indx = (n > 0) ? 0 : -1;
    T xmax = *x;
    T xm;
 
    for (i = 0; i < n; i++)
    {
        xm = (*x > 0) ? *x : -*x;
        if (xm > xmax)
        {
            xmax = xm;
            indx = i;
        }
        x += incx;
    }
 
    return indx;
}

Referenced by Iamax().

Imax() [1/5]

template<class T >

int Vmath::Imax	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the index of the maximum element in x.

Definition at line 485 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Imax(n, &x[0], incx);
}

References ASSERTL1, and Imax().

Imax() [2/5]

template int Vmath::Imax	(	int	n,
		const int *	x,
		const int	incx
	)

Imax() [3/5]

template int Vmath::Imax	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Imax() [4/5]

template int Vmath::Imax	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Imax() [5/5]

template<class T >

int Vmath::Imax	(	int	n,
		const T *	x,
		const int	incx
	)

Return the index of the maximum element in x.

Definition at line 913 of file Vmath.cpp.

{
 
    int i, indx = (n > 0) ? 0 : -1;
    T xmax = *x;
 
    for (i = 0; i < n; i++)
    {
        if (*x > xmax)
        {
            xmax = *x;
            indx = i;
        }
        x += incx;
    }
 
    return indx;
}

Referenced by Nektar::MultiRegions::AssemblyMapCG::CreateGraph(), Nektar::SolverUtils::AdvectionSystem::GetCFLEstimate(), Imax(), main(), Nektar::SolverUtils::MMFSystem::SetUpMovingFrames(), and Nektar::FieldUtils::ProcessInterpPointDataToFld::v_Process().

Imin() [1/5]

template<class T >

int Vmath::Imin	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the index of the minimum element in x.

Definition at line 521 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Imin(n, &x[0], incx);
}

References ASSERTL1, and Imin().

Imin() [2/5]

template int Vmath::Imin	(	int	n,
		const int *	x,
		const int	incx
	)

Imin() [3/5]

template int Vmath::Imin	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Imin() [4/5]

template int Vmath::Imin	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Imin() [5/5]

template<class T >

int Vmath::Imin	(	int	n,
		const T *	x,
		const int	incx
	)

Return the index of the minimum element in x.

Definition at line 1018 of file Vmath.cpp.

{
 
    int i, indx = (n > 0) ? 0 : -1;
    T xmin = *x;
 
    for (i = 0; i < n; i++)
    {
        if (*x < xmin)
        {
            xmin = *x;
            indx = i;
        }
        x += incx;
    }
 
    return indx;
}

Referenced by DetermineclosePointxindex(), Nektar::PulseWaveSystem::GetCommArray(), Imin(), MappingEVids(), MoveOutsidePointsNnormpos(), Orderfunctionx(), Nektar::Collections::CollectionOptimisation::SetWithTimings(), Nektar::VortexWaveInteraction::UpdateAlpha(), Nektar::VortexWaveInteraction::UpdateWaveForceMag(), Nektar::SpatialDomains::Geometry3D::v_GetLocCoords(), and Nektar::FieldUtils::ProcessInterpPointDataToFld::v_Process().

Neg() [1/4]

template<class T >

void Vmath::Neg	(	int	n,
		Array< OneD, T > &	x,
		const int	incx
	)

Negate x = -x.

Definition at line 212 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    Neg(n, &x[0], incx);
}

References ASSERTL1, and Neg().

Neg() [2/4]

template void Vmath::Neg	(	int	n,
		Nektar::NekDouble *	x,
		const int	incx
	)

Neg() [3/4]

template void Vmath::Neg	(	int	n,
		Nektar::NekSingle *	x,
		const int	incx
	)

Neg() [4/4]

template<class T >

void Vmath::Neg	(	int	n,
		T *	x,
		const int	incx
	)

Negate x = -x.

Definition at line 513 of file Vmath.cpp.

{
    while (n--)
    {
        *x = -(*x);
        x += incx;
    }
}

Referenced by Nektar::MMFMaxwell::AddCoriolis(), Nektar::MMFSWE::AddCoriolis(), Nektar::LinearSWE::AddCoriolis(), Nektar::NonlinearPeregrine::AddCoriolis(), Nektar::NonlinearSWE::AddCoriolis(), Nektar::SolverUtils::MMFSystem::AdddedtMaxwell(), Nektar::MMFSWE::AddDivForGradient(), Nektar::MMFMaxwell::AddGreenDerivCompensate(), Nektar::MMFMaxwell::AddPML(), Nektar::MMFSWE::AddRotation(), Nektar::SolverUtils::AdvectionWeakDG::AdvectCoeffs(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::MMFMaxwell::Checkpoint_EDFluxOutput(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::SpatialDomains::GeomFactors::ComputeMovingFrames(), Nektar::MMFSWE::ComputeVorticity(), Nektar::SolverUtils::MMFSystem::CopyBoundaryTrace(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D_Gauss(), Nektar::AcousticSystem::DoOdeRhs(), Nektar::CFLtester::DoOdeRhs(), Nektar::MMFAdvection::DoOdeRhs(), Nektar::UnsteadyAdvection::DoOdeRhs(), Nektar::UnsteadyAdvectionDiffusion::DoOdeRhs(), Nektar::UnsteadyInviscidBurger::DoOdeRhs(), Nektar::UnsteadyViscousBurgers::DoOdeRhs(), Nektar::CompressibleFlowSystem::DoOdeRhs(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::ImageWarpingSystem::DoOdeRhs(), Nektar::PulseWavePropagation::DoOdeRhs(), Nektar::LinearSWE::DoOdeRhs(), Nektar::MMFSWE::DoOdeRhs(), Nektar::NonlinearPeregrine::DoOdeRhs(), Nektar::NonlinearSWE::DoOdeRhs(), Nektar::CFSImplicit::DoOdeRhsCoeff(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GenPntwiseBodyFittedCoordSys(), Nektar::SolverUtils::MMFSystem::GramSchumitz(), Nektar::MultiRegions::ContField::LaplaceSolve(), main(), Nektar::VCSMapping::MappingAccelerationCorrection(), Nektar::VCSMapping::MappingAdvectionCorrection(), Neg(), Nektar::CoupledLinearNS::SetUpCoupledMatrix(), Nektar::IncNavierStokes::SetZeroNormalVelocity(), Nektar::UnsteadyAdvectionDiffusion::SubStepAdvection(), Nektar::SubSteppingExtrapolate::SubStepAdvection(), Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt(), Nektar::AdjointAdvection::v_Advect(), Nektar::LinearisedAdvection::v_Advect(), Nektar::NavierStokesAdvection::v_Advect(), Nektar::SkewSymmetricAdvection::v_Advect(), Nektar::WallViscousBC::v_Apply(), Nektar::MultiRegions::ExpList::v_CurlCurl(), Nektar::LocalRegions::Expansion2D::v_DGDeriv(), Nektar::LocalRegions::Expansion3D::v_DGDeriv(), Nektar::SolverUtils::DiffusionLDG::v_DiffuseCalcDerivative(), Nektar::DiffusionLDGNS::v_DiffuseCalcDerivative(), Nektar::SolverUtils::DiffusionLDG::v_DiffuseCoeffs(), Nektar::DiffusionLDGNS::v_DiffuseCoeffs(), Nektar::SolverUtils::DiffusionIP::v_DiffuseCoeffs(), Nektar::EigenValuesAdvection::v_DoSolve(), Nektar::LocalRegions::Expansion1D::v_GenMatrix(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetInvMetricTensor(), Nektar::MultiRegions::ContField::v_HelmSolve(), Nektar::MultiRegions::DisContField::v_HelmSolve(), Nektar::MMFMaxwell::v_InitObject(), Nektar::ShallowWaterSystem::v_InitObject(), Nektar::ForcingQuasi1D::v_InitObject(), Nektar::MultiRegions::ContField::v_LinearAdvectionDiffusionReactionSolve(), Nektar::FieldUtils::ProcessWallNormalData::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::VCSImplicit::v_SetUpPressureForcing(), Nektar::VCSImplicit::v_SetUpViscousForcing(), Nektar::VCSMapping::v_SolvePressure(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::LinearSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundary2D(), Nektar::NonlinearSWE::WallBoundary2D(), Nektar::MMFSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundaryForcing(), Nektar::MMFAdvection::WeakDGDirectionalAdvection(), Nektar::MMFMaxwell::WeakDGMaxwellDirDeriv(), and Nektar::MMFSWE::WeakDGSWEDirDeriv().

Nnan() [1/5]

template<class T >

int Vmath::Nnan	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return number of NaN elements of x.

Definition at line 539 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Nnan(n, &x[0], incx);
}

References ASSERTL1, and Nnan().

Nnan() [2/5]

template int Vmath::Nnan	(	int	n,
		const int *	x,
		const int	incx
	)

Nnan() [3/5]

template int Vmath::Nnan	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Nnan() [4/5]

template int Vmath::Nnan	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Nnan() [5/5]

template<class T >

int Vmath::Nnan	(	int	n,
		const T *	x,
		const int	incx
	)

Return number of NaN elements of x.

Definition at line 1071 of file Vmath.cpp.

{
 
    int nNan = 0;
 
    while (n--)
    {
        if (*x != *x)
        {
            nNan++;
        }
        x += incx;
    }
 
    return nNan;
}

Referenced by Nnan(), and Nektar::SolverUtils::UnsteadySystem::v_DoSolve().

ran2() [1/2]

template<class T >

T Vmath::ran2

(

long *

idum

)

Generates a number from ~Normal(0,1)

Definition at line 73 of file Vmath.cpp.

{
    int j;
    long k;
    static long idum2 = 123456789;
    static long iy    = 0;
    static long iv[NTAB];
    T temp;
 
    if (*idum <= 0)
    {
        if (-(*idum) < 1)
            *idum = 1;
        else
            *idum = -(*idum);
        idum2 = (*idum);
        for (j = NTAB + 7; j >= 0; j--)
        {
            k     = (*idum) / IQ1;
            *idum = IA1 * (*idum - k * IQ1) - k * IR1;
            if (*idum < 0)
                *idum += IM1;
            if (j < NTAB)
                iv[j] = *idum;
        }
        iy = iv[0];
    }
 
    k     = (*idum) / IQ1;
    *idum = IA1 * (*idum - k * IQ1) - k * IR1;
    if (*idum < 0)
        *idum += IM1;
 
    k     = idum2 / IQ2;
    idum2 = IA2 * (idum2 - k * IQ2) - k * IR2;
    if (idum2 < 0)
        idum2 += IM2;
 
    j     = iy / NDIV;
    iy    = iv[j] - idum2;
    iv[j] = *idum;
    if (iy < 1)
        iy += IMM1;
 
    if ((temp = AM * iy) > RNMX)
        return RNMX;
    else
        return temp;
}

References AM, IA1, IA2, IM1, IM2, IMM1, IQ1, IQ2, IR1, IR2, NDIV, NTAB, and RNMX.

ran2() [2/2]

template Nektar::NekDouble Vmath::ran2

(

long *

idum

)

Reverse() [1/4]

template<class T >

void Vmath::Reverse	(	int	n,
		const Array< OneD, const T > &	x,
		int	incx,
		Array< OneD, T > &	y,
		int const	incy
	)

Definition at line 611 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(std::abs(n * incx)) <=
                 x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(std::abs(n * incy)) <=
                 y.size() + y.GetOffset(),
             "Array out of bounds");
 
    Reverse(n, &x[0], incx, &y[0], incy);
}

References tinysimd::abs(), ASSERTL1, and Reverse().

Reverse() [2/4]

template void Vmath::Reverse	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Reverse() [3/4]

template void Vmath::Reverse	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Reverse() [4/4]

template<class T >

void Vmath::Reverse	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Definition at line 1222 of file Vmath.cpp.

{
    int i;
    T store;
 
    // Perform element by element swaps in case x and y reference the same
    // array.
    int nloop = n / 2;
 
    // copy value in case of n is odd number
    y[nloop] = x[nloop];
 
    const T *x_end = x + (n - 1) * incx;
    T *y_end       = y + (n - 1) * incy;
    for (i = 0; i < nloop; ++i)
    {
        store  = *x_end;
        *y_end = *x;
        *y     = store;
        x += incx;
        y += incy;
        x_end -= incx;
        y_end -= incy;
    }
}

Referenced by Nektar::SolverUtils::DiffusionLFR::DerCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D_Gauss(), Reverse(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_GetTracePhysVals(), Nektar::LocalRegions::TriExp::v_GetTracePhysVals(), Nektar::LocalRegions::QuadExp::v_GetTraceQFactors(), and Nektar::FieldUtils::ProcessSurfDistance::v_Process().

Sadd() [1/4]

template void Vmath::Sadd	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Sadd() [2/4]

template void Vmath::Sadd	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Sadd() [3/4]

template<class T >

void Vmath::Sadd	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

Add vector y = alpha + x.

Definition at line 168 of file VmathArray.hpp.

{
 
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Sadd(n, alpha, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Sadd().

Sadd() [4/4]

template<class T >

void Vmath::Sadd	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Add scalar y = alpha + x.

Add vector y = alpha + x.

Definition at line 379 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1)
    {
        while (--n)
        {
            *y = alpha + (*x);
            ++x;
            ++y;
        }
    }
    else
    {
        while (--n)
        {
            *y = alpha + (*x);
            x += incx;
            y += incy;
        }
    }
}

Referenced by Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::MMFSWE::ComputeEnergy(), DetermineclosePointxindex(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::ForcingMovingBody::InitialiseCableModel(), Nektar::NonlinearPeregrine::LaitoneSolitaryWave(), main(), MoveOutsidePointsNnormpos(), Nektar::CFSImplicit::NumCalcRiemFluxJac(), Sadd(), Nektar::FieldUtils::ProcessEquiSpacedOutput::SetHomogeneousConnectivity(), Nektar::IncNavierStokes::SetMRFWallBCs(), Nektar::FilterMovingBody::UpdateForce(), Nektar::LEE::v_AddLinTerm(), Nektar::SolverUtils::DriverArpack::v_Execute(), Nektar::SolverUtils::MMFSystem::v_GenerateSummary(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList2DHomogeneous2D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous2D::v_GetCoords(), Nektar::GlobalMapping::MappingTranslation::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetInvMetricTensor(), Nektar::SpatialDomains::Geometry3D::v_GetLocCoords(), Nektar::GlobalMapping::MappingTranslation::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXofXZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetMetricTensor(), Nektar::FilterElectrogram::v_Initialise(), Nektar::BidomainRoth::v_InitObject(), Nektar::Monodomain::v_InitObject(), Nektar::MMFMaxwell::v_InitObject(), Nektar::SolverUtils::ForcingMovingReferenceFrame::v_InitObject(), Nektar::GlobalMapping::MappingXofXZ::v_LowerIndex(), Nektar::GlobalMapping::MappingXofZ::v_LowerIndex(), Nektar::FieldUtils::OutputTecplot::v_OutputFromExp(), Nektar::StdRegions::StdTriExp::v_PhysDeriv(), Nektar::StdRegions::StdTetExp::v_PhysDeriv(), Nektar::SolverUtils::ForcingMovingReferenceFrame::v_PreApply(), Nektar::GlobalMapping::MappingXofXZ::v_RaiseIndex(), Nektar::GlobalMapping::MappingXofZ::v_RaiseIndex(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), and Nektar::CellModelFitzHughNagumo::v_Update().

Scatr() [1/7]

template<class T >

void Vmath::Scatr	(	int	n,
		const Array< OneD, const T > &	x,
		const Array< OneD, const int > &	y,
		Array< OneD, T > &	z
	)

Scatter vector z[y[i]] = x[i].

Definition at line 453 of file VmathArray.hpp.

{
    ASSERTL1(n <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Scatr(n, &x[0], &y[0], &z[0]);
}

References ASSERTL1, Scatr(), and Nektar::UnitTests::z().

Scatr() [2/7]

template void Vmath::Scatr	(	int	n,
		const Nektar::NekDouble *	sign,
		const Nektar::NekDouble *	x,
		const int *	y,
		Nektar::NekDouble *	z
	)

Scatr() [3/7]

template void Vmath::Scatr	(	int	n,
		const Nektar::NekDouble *	x,
		const int *	y,
		Nektar::NekDouble *	z
	)

Scatr() [4/7]

template void Vmath::Scatr	(	int	n,
		const Nektar::NekSingle *	sign,
		const Nektar::NekSingle *	x,
		const int *	y,
		Nektar::NekSingle *	z
	)

Scatr() [5/7]

template void Vmath::Scatr	(	int	n,
		const Nektar::NekSingle *	x,
		const int *	y,
		Nektar::NekSingle *	z
	)

Scatr() [6/7]

template<class T >

void Vmath::Scatr	(	int	n,
		const T *	sign,
		const T *	x,
		const int *	y,
		T *	z
	)

Scatter vector z[y[i]] = sign[i]*x[i].

Definition at line 832 of file Vmath.cpp.

{
    while (n--)
    {
        if (*sign)
        {
            *(z + *(y++)) = *(sign++) * (*(x++));
        }
        else
        {
            x++;
            y++;
            sign++;
        }
    }
}

References sign, and Nektar::UnitTests::z().

Scatr() [7/7]

template<class T >

void Vmath::Scatr	(	int	n,
		const T *	x,
		const int *	y,
		T *	z
	)

Scatter vector z[y[i]] = x[i].

Definition at line 817 of file Vmath.cpp.

{
    while (n--)
    {
        *(z + *(y++)) = *(x++);
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::MultiRegions::LocTraceToTraceMap::InterpLocEdgesToTrace(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocFacesToTrace(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocTracesToTrace(), Nektar::MultiRegions::AssemblyMap::LocalBndToGlobal(), Nektar::MultiRegions::AssemblyMap::LocalBndToLocal(), Nektar::MultiRegions::AssemblyMap::LocalIntToLocal(), Nektar::MultiRegions::AssemblyMap::PatchLocalToGlobal(), Scatr(), Nektar::MultiRegions::LocTraceToTraceMap::UnshuffleLocTraces(), Nektar::MultiRegions::ExpList::v_GetNormals(), Nektar::LocalRegions::Expansion3D::v_GetTracePhysVals(), and Nektar::MultiRegions::AssemblyMapCG::v_LocalToGlobal().

Sdiv() [1/4]

template void Vmath::Sdiv	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Sdiv() [2/4]

template void Vmath::Sdiv	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Sdiv() [3/4]

template<class T >

void Vmath::Sdiv	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

Scalar multiply y = alpha/x.

Definition at line 131 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(n * incx) <= x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incy) <= y.size() + y.GetOffset(),
             "Array out of bounds");
 
    Sdiv(n, alpha, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Sdiv().

Sdiv() [4/4]

template<class T >

void Vmath::Sdiv	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Scalar multiply y = alpha/x.

Definition at line 319 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1)
    {
        while (--n)
        {
            *y = alpha / (*x);
            ++x;
            ++y;
        }
    }
    else
    {
        while (--n)
        {
            *y = alpha / (*x);
            x += incx;
            y += incy;
        }
    }
}

Referenced by Nektar::MultiRegions::PreconditionerDiagonal::DiagonalPreconditionerSum(), main(), Sdiv(), Nektar::MultiRegions::PreconditionerDiagonal::StaticCondDiagonalPreconditionerSum(), Nektar::CellModel::TimeIntegrate(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::FilterElectrogram::v_Initialise(), Nektar::MultiRegions::PreconditionerLinearWithLowEnergy::v_InitObject(), Nektar::DiffusionLDGNS::v_InitObject(), Nektar::StdRegions::StdTriExp::v_PhysDeriv(), and Nektar::CourtemancheRamirezNattel98::v_Update().

Smul() [1/4]

template void Vmath::Smul	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Smul() [2/4]

template void Vmath::Smul	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Smul() [3/4]

template<class T >

void Vmath::Smul	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

Scalar multiply y = alpha*x.

Definition at line 102 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(n * incx) <= x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incy) <= y.size() + y.GetOffset(),
             "Array out of bounds");
 
    Smul(n, alpha, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Smul().

Smul() [4/4]

template<class T >

void Vmath::Smul	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Scalar multiply y = alpha*x.

Definition at line 245 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1)
    {
        while (--n)
        {
            *y = alpha * (*x);
            ++x;
            ++y;
        }
    }
    else
    {
        while (--n)
        {
            *y = alpha * (*x);
            x += incx;
            y += incy;
        }
    }
}

Referenced by Nektar::MMFSWE::AddElevationEffect(), Nektar::Extrapolate::AddPressureToOutflowBCs(), Nektar::NonlinearPeregrine::AddVariableDepth(), Nektar::NonlinearSWE::AddVariableDepth(), Nektar::SpatialDomains::GeomFactors::Adjoint(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::VCSMapping::ApplyIncNSMappingForcing(), Nektar::LinearElasticSystem::BuildLaplacianIJMatrix(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::SolverUtils::DiffusionIP::CalcTraceSymFlux(), Nektar::GlobalMapping::MappingGeneral::CalculateChristoffel(), Nektar::GlobalMapping::MappingXYofXY::CalculateChristoffel(), Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::LibUtilities::GaussPoints::CalculateGalerkinProjectionMatrix(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::MMFMaxwell::Checkpoint_EnergyOutput(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::MMFSWE::ComputeEnergy(), Nektar::MMFSWE::ComputeEnstrophy(), Computestreakpositions(), Nektar::CoupledLinearNS::Continuation(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_1D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_1D(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_1D(), Nektar::LibUtilities::NekLinSysIterGMRES::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGmresRestart(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGmresRestart(), Diffusion::DoImplicitSolve(), Nektar::UnsteadyAdvectionDiffusion::DoImplicitSolve(), Nektar::UnsteadyDiffusion::DoImplicitSolve(), Nektar::UnsteadyReactionDiffusion::DoImplicitSolve(), Nektar::UnsteadyViscousBurgers::DoImplicitSolve(), Nektar::Bidomain::DoImplicitSolve(), Nektar::BidomainRoth::DoImplicitSolve(), Nektar::Monodomain::DoImplicitSolve(), Nektar::MMFDiffusion::DoImplicitSolve(), Nektar::Bidomain::DoOdeRhs(), Nektar::BidomainRoth::DoOdeRhs(), Nektar::CompressibleFlowSystem::DoOdeRhs(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::ImageWarpingSystem::DoOdeRhs(), Nektar::NonlinearPeregrine::DoOdeRhs(), Nektar::CFSImplicit::DoOdeRhsCoeff(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_big(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_small(), Nektar::Extrapolate::EvaluateBDFArray(), Nektar::CoupledLinearNS::EvaluateNewtonRHS(), Nektar::ForcingMovingBody::EvaluateStructDynModel(), Nektar::VortexWaveInteraction::ExecuteRoll(), Nektar::Extrapolate::ExtrapolateArray(), Nektar::VortexWaveInteraction::FileRelaxation(), Nektar::FieldUtils::ProcessPhiFromFile::FindShortestDist(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GenPntwiseBodyFittedCoordSys(), Nektar::MultiRegions::ExpList::GetDiagMatIpwrtBase(), Nektar::VariableConverter::GetDynamicEnergy(), Nektar::UnsteadyDiffusion::GetFluxVector(), Nektar::UnsteadyInviscidBurger::GetFluxVector(), Nektar::LinearSWE::GetFluxVector(), Nektar::NonlinearPeregrine::GetFluxVector(), Nektar::NonlinearSWE::GetFluxVector(), Nektar::UnsteadyAdvectionDiffusion::GetFluxVectorDiff(), Nektar::UnsteadyViscousBurgers::GetFluxVectorDiff(), Nektar::SolverUtils::MMFSystem::GetMaxwellFlux2D(), Nektar::VariableConverter::GetMuAv(), Nektar::UnsteadyInviscidBurger::GetNormalVelocity(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), Nektar::NavierStokesCFE::GetViscosityAndThermalCondFromTemp(), Nektar::MultiRegions::GJPStabilisation::GJPStabilisation(), Nektar::ForcingMovingBody::InitialiseCableModel(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::InitializeData(), Nektar::LocalRegions::NodalTriExp::Integral(), Nektar::FieldUtils::ProcessWallNormalData::isInProjectedArea2D(), Nektar::FieldUtils::ProcessWallNormalData::isInProjectedArea3D(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree(), main(), Nektar::CFSImplicit::MatrixMultiplyMatrixFreeCoeff(), Nektar::CFSImplicit::MultiplyElmtInvMassPlusSource(), Nektar::CFSImplicit::NumCalcRiemFluxJac(), Nektar::SolverUtils::DiffusionLDG::NumFluxforVector(), Nektar::Collections::IProductWRTDerivBase_StdMat::operator()(), Nektar::Collections::IProductWRTDerivBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Seg::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Quad::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tri::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tet::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Prism::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Pyr::operator()(), Nektar::Collections::Helmholtz_IterPerExp::operator()(), Nektar::Collections::IProductWRTBase_StdMat::operator()(), Nektar::Collections::PhysDeriv_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_SumFac_Seg::operator()(), Nektar::Collections::PhysDeriv_SumFac_Quad::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tri::operator()(), Nektar::Collections::PhysDeriv_SumFac_Hex::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tet::operator()(), Nektar::Collections::PhysDeriv_SumFac_Prism::operator()(), Nektar::Collections::PhysDeriv_SumFac_Pyr::operator()(), Nektar::SolverUtils::FilterFieldConvert::OutputField(), Nektar::LocalRegions::NodalTriExp::PhysDeriv(), Nektar::MultiRegions::GlobalLinSysIterativeStaticCond::PrepareLocalSchurComplement(), Nektar::PressureMachTemperatureBC::PressureMachTemperatureBC(), Nektar::FieldUtils::ProcessWallNormalData::ProjectPoint(), Nektar::FieldUtils::ProcessWallNormalData::ProjectVertices(), Nektar::SolverUtils::CouplingCwipi::ReceiveCwipi(), Nektar::LibUtilities::NekFFTW::Reshuffle_Nek2FFTW(), Nektar::IncNavierStokes::SetMRFWallBCs(), Nektar::CoupledLinearNS::SetUpCoupledMatrix(), Nektar::IncNavierStokes::SetWomersleyBoundary(), Smul(), Nektar::CoupledLinearNS::SolveUnsteadyStokesSystem(), Nektar::SubSteppingExtrapolate::SubStepExtrapolateField(), Nektar::SolverUtils::UnsteadySystem::SVVVarDiffCoeff(), Nektar::MMFMaxwell::TestMaxwellSphere(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::TimeIntegrate(), Nektar::FilterMovingBody::UpdateForce(), Nektar::SmoothedProfileMethod::UpdateForcing(), Nektar::MultiRegions::GlobalLinSysIterative::UpdateKnownSolutions(), Nektar::Extrapolate::v_AccelerationBDF(), Nektar::StandardExtrapolate::v_AccelerationBDF(), Nektar::AlternateSkewAdvection::v_Advect(), Nektar::SkewSymmetricAdvection::v_Advect(), Nektar::LocalRegions::HexExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::NodalTriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PrismExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PyrExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::QuadExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TetExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TriExp::v_AlignVectorToCollapsedDir(), Nektar::SymmetryBC::v_Apply(), Nektar::WallBC::v_Apply(), Nektar::ForcingAxiSymmetric::v_Apply(), Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::SegExp::v_ComputeTraceNormal(), Nektar::MappingExtrapolate::v_CorrectPressureBCs(), Nektar::MultiRegions::ExpList::v_CurlCurl(), Nektar::SolverUtils::Diffusion3DHomogeneous1D::v_Diffuse(), Nektar::PreconCfsBRJ::v_DoPreconCfs(), Nektar::LinearElasticSystem::v_DoSolve(), Nektar::SolverUtils::DriverModifiedArnoldi::v_Execute(), Nektar::StdRegions::StdHexExp::v_GenMatrix(), Nektar::StdRegions::StdPrismExp::v_GenMatrix(), Nektar::StdRegions::StdQuadExp::v_GenMatrix(), Nektar::StdRegions::StdTetExp::v_GenMatrix(), Nektar::StdRegions::StdTriExp::v_GenMatrix(), Nektar::NonSmoothShockCapture::v_GetArtificialViscosity(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList2DHomogeneous2D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous2D::v_GetCoords(), Nektar::AcousticSystem::v_GetMaxStdVelocity(), Nektar::CompressibleFlowSystem::v_GetMaxStdVelocity(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::NavierStokesCFE::v_GetViscousFluxVectorDeAlias(), Nektar::MultiRegions::ContField::v_HelmSolve(), Nektar::MultiRegions::DisContField::v_HelmSolve(), Nektar::SolverUtils::FilterFieldConvert::v_Initialise(), Nektar::BidomainRoth::v_InitObject(), Nektar::Monodomain::v_InitObject(), Nektar::IterativeElasticSystem::v_InitObject(), Nektar::MMFMaxwell::v_InitObject(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::LocalRegions::HexExp::v_Integral(), Nektar::LocalRegions::PrismExp::v_Integral(), Nektar::LocalRegions::PyrExp::v_Integral(), Nektar::LocalRegions::QuadExp::v_Integral(), Nektar::LocalRegions::SegExp::v_Integral(), Nektar::LocalRegions::TetExp::v_Integral(), Nektar::LocalRegions::TriExp::v_Integral(), Nektar::StdRegions::StdTriExp::v_Integral(), Nektar::LocalRegions::SegExp::v_IProductWRTBase(), Nektar::LocalRegions::SegExp::v_IProductWRTDerivBase(), Nektar::MultiRegions::ExpListHomogeneous1D::v_IProductWRTDerivBase(), Nektar::StdRegions::StdPrismExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdPyrExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTetExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTriExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::MultiRegions::ContField::v_LinearAdvectionDiffusionReactionSolve(), Nektar::SubSteppingExtrapolate::v_MountHOPBCs(), Nektar::WeakPressureExtrapolate::v_MountHOPBCs(), Nektar::StdRegions::StdHexExp::v_MultiplyByStdQuadratureMetric(), Nektar::LocalRegions::HexExp::v_PhysDeriv(), Nektar::LocalRegions::PrismExp::v_PhysDeriv(), Nektar::LocalRegions::PyrExp::v_PhysDeriv(), Nektar::LocalRegions::TetExp::v_PhysDeriv(), Nektar::MultiRegions::ExpListHomogeneous1D::v_PhysDeriv(), Nektar::MultiRegions::ExpListHomogeneous2D::v_PhysDeriv(), Nektar::StdRegions::StdPrismExp::v_PhysDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDeriv(), Nektar::LocalRegions::TriExp::v_PhysDeriv(), Nektar::StdRegions::StdTriExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv(), Nektar::StdRegions::StdTetExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv_s(), Nektar::FieldUtils::ProcessAddFld::v_Process(), Nektar::FieldUtils::ProcessAverageFld::v_Process(), Nektar::FieldUtils::ProcessBodyFittedVelocity::v_Process(), Nektar::FieldUtils::ProcessC0Projection::v_Process(), Nektar::FieldUtils::ProcessCombineAvg::v_Process(), Nektar::FieldUtils::ProcessInterpField::v_Process(), Nektar::FieldUtils::ProcessInterpPoints::v_Process(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessPowerSpectrum::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessScaleInFld::v_Process(), Nektar::FieldUtils::ProcessWallNormalData::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_ResidualEval(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_ResidualEval(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::VelocityCorrectionScheme::v_SetUpPressureForcing(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::VCSWeakPressure::v_SetUpPressureForcing(), Nektar::VCSImplicit::v_SetUpViscousForcing(), Nektar::VCSMapping::v_SolvePressure(), Nektar::VCSMapping::v_SolveViscous(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), Nektar::CellModelFitzHughNagumo::v_Update(), Nektar::GlobalMapping::Mapping::v_VelocityLaplacian(), Nektar::AcousticSystem::WallBC(), Nektar::LinearSWE::WallBoundary(), Nektar::NonlinearPeregrine::WallBoundary(), Nektar::NonlinearSWE::WallBoundary(), and Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1().

Ssub() [1/4]

template void Vmath::Ssub	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Ssub() [2/4]

template void Vmath::Ssub	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Ssub() [3/4]

template<class T >

void Vmath::Ssub	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

Add vector y = alpha - x.

Definition at line 193 of file VmathArray.hpp.

{
 
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Ssub(n, alpha, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Ssub().

Ssub() [4/4]

template<class T >

void Vmath::Ssub	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Substract vector y = alpha - x.

Definition at line 453 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1)
    {
        while (--n)
        {
            *y = alpha - (*x);
            ++x;
            ++y;
        }
    }
    else
    {
        while (--n)
        {
            *y = alpha - (*x);
            x += incx;
            y += incy;
        }
    }
}

Referenced by Ssub().

Svtsvtp() [1/4]

template void Vmath::Svtsvtp	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		int	incx,
		const Nektar::NekDouble	beta,
		const Nektar::NekDouble *	y,
		int	incy,
		Nektar::NekDouble *	z,
		int	incz
	)

Svtsvtp() [2/4]

template void Vmath::Svtsvtp	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		int	incx,
		const Nektar::NekSingle	beta,
		const Nektar::NekSingle *	y,
		int	incy,
		Nektar::NekSingle *	z,
		int	incz
	)

Svtsvtp() [3/4]

template<class T >

void Vmath::Svtsvtp	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		const T	beta,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

svtsvtp (scalar times vector plus scalar times vector): z = alpha*x + beta*y

Definition at line 421 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Svtsvtp(n, alpha, &x[0], incx, beta, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Nektar::LibUtilities::beta, Svtsvtp(), and Nektar::UnitTests::z().

Svtsvtp() [4/4]

template<class T >

void Vmath::Svtsvtp	(	int	n,
		const T	alpha,
		const T *	x,
		int	incx,
		const T	beta,
		const T *	y,
		int	incy,
		T *	z,
		int	incz
	)

svtvvtp (scalar times vector plus scalar times vector):

Svtsvtp (scalar times vector plus scalar times vector):

Definition at line 746 of file Vmath.cpp.

{
    while (n--)
    {
        *z = alpha * (*x) + beta * (*y);
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::LibUtilities::beta, and Nektar::UnitTests::z().

Referenced by Nektar::IncNavierStokes::SetMRFWallBCs(), Svtsvtp(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::NavierStokesCFE::v_GetFluxPenalty(), Nektar::DiffusionLDGNS::v_InitObject(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), Nektar::SolverUtils::FilterMovingAverage::v_ProcessSample(), Nektar::SolverUtils::FilterReynoldsStresses::v_ProcessSample(), Nektar::SolverUtils::CouplingCwipi::v_Receive(), Nektar::LibUtilities::TimeIntegrationSchemeGEM::v_TimeIntegrate(), Nektar::CourtemancheRamirezNattel98::v_Update(), and Nektar::FieldUtils::ProcessPhiFromFile::Vector2edge().

Svtvm() [1/4]

template void Vmath::Svtvm	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Svtvm() [2/4]

template void Vmath::Svtvm	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Svtvm() [3/4]

template<class T >

void Vmath::Svtvm	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

svtvm (scalar times vector minus vector): z = alpha*x - y

Definition at line 354 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Svtvm(n, alpha, &x[0], incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Svtvm(), and Nektar::UnitTests::z().

Svtvm() [4/4]

template<class T >

void Vmath::Svtvm	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

svtvm (scalar times vector minus vector): z = alpha*x - y

Svtvm (scalar times vector minus vector): z = alpha*x - y.

Definition at line 659 of file Vmath.cpp.

{
    while (n--)
    {
        *z = alpha * (*x) - (*y);
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::Extrapolate::CalcOutflowBCs(), Nektar::MMFDiffusion::DoOdeRhs(), Svtvm(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::SolverUtils::FilterReynoldsStresses::v_ProcessSample(), and Nektar::CourtemancheRamirezNattel98::v_Update().

Svtvp() [1/4]

template void Vmath::Svtvp	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Svtvp() [2/4]

template void Vmath::Svtvp	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Svtvp() [3/4]

template<class T >

void Vmath::Svtvp	(	int	n,
		const T	alpha,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

svtvp (scalar times vector plus vector): z = alpha*x + y

Definition at line 341 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Svtvp(n, alpha, &x[0], incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Svtvp(), and Nektar::UnitTests::z().

Svtvp() [4/4]

template<class T >

void Vmath::Svtvp	(	int	n,
		const T	alpha,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

svtvp (scalar times vector plus vector): z = alpha*x + y

Svtvp (scalar times vector plus vector): z = alpha*x + y.

Definition at line 617 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1 && incz == 1)
    {
        while (--n)
        {
            *z = alpha * (*x) + (*y);
            ++x;
            ++y;
            ++z;
        }
    }
    else
    {
        while (--n)
        {
            *z = alpha * (*x) + (*y);
            x += incx;
            y += incy;
            z += incz;
        }
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::Extrapolate::AddDuDt(), Nektar::SolverUtils::ForcingMovingReferenceFrame::addRotation(), Nektar::Extrapolate::AddVelBC(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::LocalRegions::Expansion::ComputeGmatcdotMF(), Nektar::MMFMaxwell::ComputeRadCloak(), Nektar::SolverUtils::DriverSteadyState::ComputeSFD(), Nektar::SolverUtils::DriverPFASST::Correct(), Nektar::LocalRegions::Expansion2D::CreateMatrix(), Nektar::LocalRegions::Expansion3D::CreateMatrix(), Nektar::LibUtilities::NekLinSysIterGMRES::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoArnoldi(), Nektar::LibUtilities::NekLinSysIterCGLoc::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterCG::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGMRES(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGMRES(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGmresRestart(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGmresRestart(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_big(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_small(), Nektar::Extrapolate::EvaluateBDFArray(), Nektar::ForcingMovingBody::EvaluateStructDynModel(), Nektar::Extrapolate::ExtrapolateArray(), Nektar::VortexWaveInteraction::FileRelaxation(), Nektar::MultiRegions::ExpList::GetMatIpwrtDeriveBase(), Nektar::FieldUtils::ProcessCFL::GetMaxStdVelocity(), Nektar::Extrapolate::GetMaxStdVelocity(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocEdgesToTraceTranspose(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocFacesToTraceTranspose(), Nektar::SolverUtils::DriverPFASST::Interpolate(), Nektar::StdRegions::StdExpansion::LinearAdvectionDiffusionReactionMatrixOp_MatFree(), main(), Nektar::CFSImplicit::MatrixMultiplyMatrixFreeCoeff(), Nektar::CFSImplicit::NonlinSysEvaluatorCoeff(), Nektar::SolverUtils::MMFSystem::NumericalMaxwellFluxTE(), Nektar::SolverUtils::MMFSystem::NumericalMaxwellFluxTM(), Nektar::SolverUtils::DiffusionLFR::NumFluxforScalar(), Nektar::SolverUtils::DiffusionLFR::NumFluxforVector(), Nektar::Collections::IProductWRTDerivBase_StdMat::operator()(), Nektar::Collections::IProductWRTDerivBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Seg::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Quad::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tri::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tet::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Prism::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Pyr::operator()(), Nektar::Collections::Helmholtz_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_StdMat::operator()(), Nektar::Collections::PhysDeriv_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_SumFac_Quad::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tri::operator()(), Nektar::Collections::PhysDeriv_SumFac_Hex::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tet::operator()(), Nektar::Collections::PhysDeriv_SumFac_Prism::operator()(), Nektar::Collections::PhysDeriv_SumFac_Pyr::operator()(), Nektar::SolverUtils::DriverPFASST::Restrict(), Nektar::RiemannInvariantBC::RiemannInvariantBC(), Nektar::IncNavierStokes::SetMRFDomainVelBCs(), Nektar::IncNavierStokes::SetMRFWallBCs(), Svtvp(), Nektar::CellModel::TimeIntegrate(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::TimeIntegrate(), Nektar::LinearisedAdvection::UpdateBase(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateIntegratedResidualQFint(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateIntegratedResidualSFint(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateLastQuadrature(), Nektar::Extrapolate::v_AccelerationBDF(), Nektar::StandardExtrapolate::v_AccelerationBDF(), Nektar::SubSteppingExtrapolateWeakPressure::v_AddNormVelOnOBC(), Nektar::WeakPressureExtrapolate::v_AddNormVelOnOBC(), Nektar::SolverUtils::ForcingBody::v_Apply(), Nektar::SolverUtils::ForcingBody::v_ApplyCoeff(), Nektar::LibUtilities::ExplicitTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::PreconCfsBRJ::v_DoPreconCfs(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::AcousticSystem::v_GetMaxStdVelocity(), Nektar::CompressibleFlowSystem::v_GetMaxStdVelocity(), Nektar::StdRegions::StdExpansion2D::v_HelmholtzMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion3D::v_HelmholtzMatrixOp_MatFree(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::StandardExtrapolate::v_MountHOPBCs(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), Nektar::StdRegions::StdPrismExp::v_PhysDeriv(), Nektar::LocalRegions::TriExp::v_PhysDirectionalDeriv(), Nektar::FieldUtils::ProcessCombineAvg::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessScalGrad::v_Process(), Nektar::LibUtilities::ExplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::VCSImplicit::v_SetUpPressureForcing(), Nektar::VCSImplicit::v_SetUpViscousForcing(), Nektar::VelocityCorrectionScheme::v_SolveUnsteadyStokesSystem(), Nektar::LibUtilities::TimeIntegrationSchemeGEM::v_TimeIntegrate(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), and Nektar::CellModelFitzHughNagumo::v_Update().

Vabs() [1/4]

template<class T >

void Vmath::Vabs	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

vabs: y = |x|

Definition at line 265 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Vabs(n, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Vabs().

Vabs() [2/4]

template void Vmath::Vabs	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Vabs() [3/4]

template void Vmath::Vabs	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Vabs() [4/4]

template<class T >

void Vmath::Vabs	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

vabs: y = |x|

Definition at line 548 of file Vmath.cpp.

{
    while (n--)
    {
        *y = (*x > 0) ? *x : -(*x);
        x += incx;
        y += incy;
    }
}

Referenced by Nektar::SolverUtils::MMFSystem::AbsIntegral(), Nektar::SolverUtils::MMFSystem::AvgAbsInt(), Nektar::VelocityCorrectionScheme::ComputeGJPNormalVelocity(), DetermineclosePointxindex(), Nektar::StdRegions::StdExpansion::Linf(), Nektar::PressureInflowFileBC::v_Apply(), Nektar::PressureOutflowBC::v_Apply(), Nektar::PressureOutflowNonReflectiveBC::v_Apply(), Nektar::RiemannInvariantBC::v_Apply(), Nektar::SolverUtils::MMFSystem::v_GenerateSummary(), Nektar::GlobalMapping::MappingXYofXY::v_GetJacobian(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::MMFSWE::v_L2Error(), and Vabs().

Vadd() [1/4]

template<class T >

void Vmath::Vadd	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Add vector z = x+y.

Definition at line 144 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(n * incx) <= x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incy) <= y.size() + y.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incz) <= z.size() + z.GetOffset(),
             "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incx, incy, incz);
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vadd(n, &x[0], &y[0], &z[0]);
#else
    Vadd(n, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vadd(), Vadd(), and Nektar::UnitTests::z().

Vadd() [2/4]

template void Vmath::Vadd	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vadd() [3/4]

template void Vmath::Vadd	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vadd() [4/4]

template<class T >

void Vmath::Vadd	(	int	n,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

Add vector z = x+y.

Definition at line 354 of file Vmath.cpp.

{
    while (n--)
    {
        *z = (*x) + (*y);
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::NekMatrix< DataType, StandardMatrixTag >::AbsMaxtoMinEigenValueRatio(), Nektar::MMFMaxwell::AddCoriolis(), Nektar::MMFSWE::AddCoriolis(), Nektar::LinearSWE::AddCoriolis(), Nektar::NonlinearPeregrine::AddCoriolis(), Nektar::NonlinearSWE::AddCoriolis(), Nektar::SolverUtils::MMFSystem::AdddedtMaxwell(), Nektar::MMFSWE::AddDivForGradient(), Nektar::MMFSWE::AddElevationEffect(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::AddFASCorrectionToSFint(), Nektar::MMFMaxwell::AddGreenDerivCompensate(), Nektar::MultiRegions::LocTraceToTraceMap::AddLocTracesToField(), Nektar::CFSImplicit::AddMatNSBlkDiagVol(), Nektar::MMFMaxwell::AddPML(), Nektar::Extrapolate::AddPressureToOutflowBCs(), Nektar::MultiRegions::ExpList::AddRightIPTBaseMatrix(), Nektar::MultiRegions::ExpList::AddRightIPTPhysDerivBase(), Nektar::MMFSWE::AddRotation(), Nektar::SolverUtils::DiffusionIP::AddSymmFluxIntegralToCoeff(), Nektar::SolverUtils::DiffusionIP::AddSymmFluxIntegralToPhys(), Nektar::SolverUtils::Advection::AddTraceJacToMat(), Nektar::NonlinearPeregrine::AddVariableDepth(), Nektar::NonlinearSWE::AddVariableDepth(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::VCSMapping::ApplyIncNSMappingForcing(), Nektar::MultiRegions::PreconditionerBlock::BlockPreconditionerCG(), Nektar::HexCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::PrismCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::PyrCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::QuadCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::SegCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::TetCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::TriCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::SolverUtils::DiffusionIP::CalcTraceNumFlux(), Nektar::GlobalMapping::MappingGeneral::CalculateChristoffel(), Nektar::GlobalMapping::MappingXYofXY::CalculateChristoffel(), Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::MMFMaxwell::Checkpoint_TotalFieldOutput(), Nektar::MMFMaxwell::Checkpoint_TotPlotOutput(), Nektar::SolverUtils::MMFSystem::ComputeDivCurlMF(), Nektar::MMFSWE::ComputeEnergy(), Nektar::MMFSWE::ComputeEnstrophy(), Nektar::MMFSWE::ComputeMass(), Computestreakpositions(), Nektar::MMFMaxwell::ComputeSurfaceCurrent(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::ComputeTotalResidual(), Nektar::MMFSWE::ComputeVorticity(), Nektar::CoupledLinearNS::Continuation(), Nektar::SolverUtils::DriverPFASST::Correct(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_1D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_1D(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_1D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D_Gauss(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGmresRestart(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGmresRestart(), Nektar::Bidomain::DoImplicitSolve(), Nektar::UnsteadyAdvectionDiffusion::DoOdeRhs(), Nektar::UnsteadyViscousBurgers::DoOdeRhs(), Nektar::Bidomain::DoOdeRhs(), Nektar::BidomainRoth::DoOdeRhs(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::ImageWarpingSystem::DoOdeRhs(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::LinearSWE::DoOdeRhs(), Nektar::NonlinearPeregrine::DoOdeRhs(), Nektar::NonlinearSWE::DoOdeRhs(), Nektar::MMFAdvection::EvaluateAdvectionVelocity(), Nektar::MultiRegions::DisContField::EvaluateHDGPostProcessing(), Nektar::CoupledLinearNS::EvaluateNewtonRHS(), Nektar::SolverUtils::DriverPFASST::EvaluateSDCResidualNorm(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GenPntwiseBodyFittedCoordSys(), Nektar::VariableConverter::GetEnthalpy(), Nektar::LinearSWE::GetFluxVector(), Nektar::NonlinearPeregrine::GetFluxVector(), Nektar::NonlinearSWE::GetFluxVector(), Nektar::CompressibleFlowSystem::GetFluxVectorDeAlias(), Nektar::MultiRegions::ExpList::GetMatIpwrtDeriveBase(), Nektar::VariableConverter::GetMuAv(), Nektar::UnsteadyInviscidBurger::GetNormalVelocity(), Nektar::MMFSWE::GetSWEFluxVector(), Nektar::NavierStokesCFE::GetViscosityAndThermalCondFromTemp(), Nektar::LocalRegions::NodalTriExp::IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree_GenericImpl(), Nektar::StdRegions::StdExpansion::LinearAdvectionDiffusionReactionMatrixOp_MatFree(), main(), Nektar::VCSMapping::MappingAccelerationCorrection(), MoveOutsidePointsNnormpos(), Nektar::CFSImplicit::MultiplyElmtInvMassPlusSource(), Nektar::SolverUtils::DiffusionLFRNS::NumericalFluxO2(), Nektar::DiffusionLDGNS::NumericalFluxO2(), Nektar::SolverUtils::DiffusionLFR::NumFluxforVector(), Nektar::SolverUtils::DiffusionLDG::NumFluxforVector(), Nektar::Collections::IProductWRTDerivBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTDerivBase_NoCollection::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Quad::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tri::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tet::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Prism::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Pyr::operator()(), Nektar::Collections::Helmholtz_IterPerExp::operator()(), Nektar::SolverUtils::DriverParareal::PararealCorrection(), Nektar::PressureMachTemperatureBC::PressureMachTemperatureBC(), Nektar::LinearSWE::PrimitiveToConservative(), Nektar::MMFSWE::PrimitiveToConservative(), Nektar::NonlinearPeregrine::PrimitiveToConservative(), Nektar::NonlinearSWE::PrimitiveToConservative(), Nektar::FieldUtils::ProcessWallNormalData::ProjectPoint(), Nektar::FieldUtils::ProcessWallNormalData::ProjectVertices(), Nektar::SmoothedProfileMethod::SetUpCorrectionPressure(), Nektar::SolverUtils::MMFSystem::SetUpMovingFrames(), Nektar::SmoothedProfileMethod::SolveCorrectedVelocity(), Nektar::CoupledLinearNS::SolveSteadyNavierStokes(), Nektar::FilterMovingBody::UpdateForce(), Nektar::GlobalMapping::UpdateGeometry(), Nektar::LEE::v_AddLinTerm(), Nektar::SolverUtils::AdvectionFR::v_Advect(), Nektar::AlternateSkewAdvection::v_Advect(), Nektar::SkewSymmetricAdvection::v_Advect(), Nektar::SolverUtils::Advection3DHomogeneous1D::v_Advect(), Nektar::LocalRegions::NodalTriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PrismExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PyrExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TriExp::v_AlignVectorToCollapsedDir(), Nektar::WallViscousBC::v_Apply(), Nektar::SolverUtils::ForcingAbsorption::v_Apply(), Nektar::SolverUtils::ForcingBody::v_Apply(), Nektar::SolverUtils::ForcingNoise::v_Apply(), Nektar::SolverUtils::ForcingProgrammatic::v_Apply(), Nektar::ForcingAxiSymmetric::v_Apply(), Nektar::ForcingQuasi1D::v_Apply(), Nektar::ForcingMovingBody::v_Apply(), Nektar::ForcingStabilityCoupledLNS::v_Apply(), Nektar::SolverUtils::ForcingAbsorption::v_ApplyCoeff(), Nektar::SolverUtils::ForcingBody::v_ApplyCoeff(), Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs(), Nektar::GlobalMapping::MappingXofZ::v_ContravarToCartesian(), Nektar::MappingExtrapolate::v_CorrectPressureBCs(), Nektar::GlobalMapping::MappingXofXZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::Mapping::v_CurlCurlField(), Nektar::MultiRegions::ExpListHomogeneous2D::v_DealiasedDotProd(), Nektar::SolverUtils::Diffusion3DHomogeneous1D::v_Diffuse(), Nektar::SolverUtils::DiffusionLFR::v_Diffuse(), Nektar::SolverUtils::DiffusionLFRNS::v_Diffuse(), Nektar::GlobalMapping::Mapping::v_Divergence(), Nektar::ArtificialDiffusion::v_DoArtificialDiffusion(), Nektar::ArtificialDiffusion::v_DoArtificialDiffusionCoeff(), Nektar::NavierStokesCFE::v_DoDiffusion(), Nektar::NavierStokesCFEAxisym::v_DoDiffusion(), Nektar::NavierStokesImplicitCFE::v_DoDiffusionCoeff(), Nektar::MultiRegions::PreconditionerLinearWithLowEnergy::v_DoPreconditioner(), Nektar::LinearElasticSystem::v_DoSolve(), Nektar::MMFMaxwell::v_DoSolve(), Nektar::NonSmoothShockCapture::v_GetArtificialViscosity(), Nektar::APE::v_GetFluxVector(), Nektar::LEE::v_GetFluxVector(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofXZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetMetricTensor(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::NavierStokesCFE::v_GetViscousFluxVectorDeAlias(), Nektar::GlobalMapping::Mapping::v_gradgradU(), Nektar::Bidomain::v_InitObject(), Nektar::BidomainRoth::v_InitObject(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::MultiRegions::ExpListHomogeneous1D::v_IProductWRTDerivBase(), Nektar::LocalRegions::TetExp::v_IProductWRTDerivBase(), Nektar::LocalRegions::HexExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::PrismExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::PyrExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::QuadExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdPrismExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdPyrExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTetExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTriExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::HexExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::HexExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::QuadExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::TriExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::MMFSWE::v_LinfError(), Nektar::GlobalMapping::MappingXofXZ::v_LowerIndex(), Nektar::GlobalMapping::MappingXofZ::v_LowerIndex(), Nektar::StdRegions::StdTetExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv_n(), Nektar::SolverUtils::ForcingMovingReferenceFrame::v_PreApply(), Nektar::LinearSWE::v_PrimitiveToConservative(), Nektar::NonlinearPeregrine::v_PrimitiveToConservative(), Nektar::NonlinearSWE::v_PrimitiveToConservative(), Nektar::FieldUtils::ProcessAddFld::v_Process(), Nektar::FieldUtils::ProcessAverageFld::v_Process(), Nektar::FieldUtils::ProcessBodyFittedVelocity::v_Process(), Nektar::FieldUtils::ProcessCombineAvg::v_Process(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessVelocityDivergence::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::SolverUtils::FilterBodyFittedVelocity::v_ProcessSample(), Nektar::SolverUtils::FilterAverageFields::v_ProcessSample(), Nektar::LibUtilities::ExplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::CompressibleFlowSystem::v_SetInitialConditions(), Nektar::VelocityCorrectionScheme::v_SetUpPressureForcing(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::MultiRegions::GlobalLinSysIterativeFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysPETScFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysStaticCond::v_Solve(), Nektar::MultiRegions::GlobalLinSysXxtFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysDirectFull::v_Solve(), Nektar::VCSMapping::v_SolvePressure(), Nektar::SmoothedProfileMethod::v_SolveUnsteadyStokesSystem(), Nektar::VCSMapping::v_SolveViscous(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), Nektar::SolverUtils::FilterModalEnergy::v_Update(), Nektar::GlobalMapping::Mapping::v_UpdateBCs(), Nektar::GlobalMapping::Mapping::v_VelocityLaplacian(), Vadd(), Nektar::MMFAdvection::WeakDGDirectionalAdvection(), Nektar::MMFMaxwell::WeakDGMaxwellDirDeriv(), Nektar::MMFSWE::WeakDGSWEDirDeriv(), Nektar::StdRegions::StdExpansion::WeakDirectionalDerivMatrixOp_MatFree(), and Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1().

Vamax() [1/4]

template<class T >

T Vmath::Vamax	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the maximum absolute element in x called vamax to avoid conflict with max.

Definition at line 512 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Vamax(n, &x[0], incx);
}

References ASSERTL1, and Vamax().

Vamax() [2/4]

template Nektar::NekDouble Vmath::Vamax	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Vamax() [3/4]

template Nektar::NekSingle Vmath::Vamax	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Vamax() [4/4]

template<class T >

T Vmath::Vamax	(	int	n,
		const T *	x,
		const int	incx
	)

Return the maximum absolute element in x called vamax to avoid conflict with max.

Definition at line 994 of file Vmath.cpp.

{
 
    T xmax = *x;
    T xm;
 
    while (n--)
    {
        xm = (*x > 0) ? *x : -*x;
        if (xm > xmax)
        {
            xmax = xm;
        }
        x += incx;
    }
    return xmax;
}

Referenced by Nektar::MMFSWE::EvaluateWaterDepth(), Nektar::MMFSWE::LaxFriedrichFlux(), Nektar::StdRegions::StdExpansion::Linf(), Nektar::MMFSWE::TestVorticityComputation(), Nektar::MMFMaxwell::v_DoSolve(), Nektar::MMFSWE::v_LinfError(), and Vamax().

Vcopy() [1/6]

template<class T >

void Vmath::Vcopy	(	int	n,
		const Array< OneD, const T > &	x,
		int	incx,
		Array< OneD, T > &	y,
		int const	incy
	)

Definition at line 596 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(std::abs(n * incx)) <=
                 x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(std::abs(n * incy)) <=
                 y.size() + y.GetOffset(),
             "Array out of bounds");
 
    Vcopy(n, &x[0], incx, &y[0], incy);
}

References tinysimd::abs(), ASSERTL1, and Vcopy().

Vcopy() [2/6]

template void Vmath::Vcopy	(	int	n,
		const int *	x,
		const int	incx,
		int *	y,
		const int	incy
	)

Vcopy() [3/6]

template void Vmath::Vcopy	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Vcopy() [4/6]

template void Vmath::Vcopy	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Vcopy() [5/6]

template<typename T >

void Vmath::Vcopy	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

Definition at line 1191 of file Vmath.cpp.

{
    if (incx == 1 && incy == 1)
    {
        memcpy(y, x, n * sizeof(T));
    }
    else
    {
        while (n--)
        {
            *y = *x;
            x += incx;
            y += incy;
        }
    }
}

Referenced by Nektar::LocalRegions::Expansion2D::AddHDGHelmholtzTraceTerms(), Nektar::CFSImplicit::AddMatNSBlkDiagVol(), Nektar::MultiRegions::ExpList::AddRightIPTBaseMatrix(), Nektar::MultiRegions::ExpList::AddRightIPTPhysDerivBase(), Nektar::SolverUtils::ForcingMovingReferenceFrame::addRotation(), Nektar::MultiRegions::ExpList::AddTraceJacToElmtJac(), Nektar::SolverUtils::Advection::AddTraceJacToMat(), Nektar::SpatialDomains::GeomFactors::Adjoint(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::VariableConverter::ApplyC0Smooth(), Nektar::VCSMapping::ApplyIncNSMappingForcing(), Nektar::SolverUtils::DiffusionLDG::ApplyScalarBCs(), Nektar::SolverUtils::DriverParareal::ApplyWindowing(), Nektar::MultiRegions::AssemblyMap::AssembleBnd(), Nektar::HexCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::PrismCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::PyrCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::QuadCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::SegCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::TetCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::TriCollectionTests::BOOST_AUTO_TEST_CASE(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::SolverUtils::ForcingAbsorption::CalculateForcing(), Nektar::LibUtilities::NodalTriEvenlySpaced::CalculateInterpMatrix(), Nektar::LibUtilities::NodalTriFekete::CalculateInterpMatrix(), Nektar::LibUtilities::NodalPrismElec::CalculateInterpMatrix(), Nektar::LibUtilities::NodalPrismEvenlySpaced::CalculateInterpMatrix(), Nektar::LibUtilities::NodalTetEvenlySpaced::CalculateInterpMatrix(), Nektar::LibUtilities::NodalTriElec::CalculateInterpMatrix(), Nektar::LibUtilities::NodalTetElec::CalculateInterpMatrix(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SolverUtils::MMFSystem::CheckMovingFrames(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::SolverUtils::UnsteadySystem::CheckSteadyState(), Nektar::MMFSWE::Compute_demdt_cdot_ek(), Nektar::SolverUtils::MMFSystem::ComputeCurl(), Nektar::SolverUtils::MMFSystem::Computedemdxicdote(), Nektar::SolverUtils::MMFSystem::ComputeDivCurlMF(), Nektar::SolverUtils::MMFSystem::ComputeMFtrace(), Nektar::SpatialDomains::GeomFactors::ComputeMovingFrames(), Nektar::SolverUtils::MMFSystem::ComputencdotMF(), Nektar::MMFMaxwell::ComputeRadCloak(), Computestreakpositions(), Nektar::LinearSWE::ConservativeToPrimitive(), Nektar::MMFSWE::ConservativeToPrimitive(), Nektar::NonlinearPeregrine::ConservativeToPrimitive(), Nektar::NonlinearSWE::ConservativeToPrimitive(), Nektar::GlobalMapping::Mapping::ContravarFromCartesian(), Nektar::GlobalMapping::Mapping::ContravarToCartesian(), Nektar::SolverUtils::DriverArnoldi::CopyArnoldiArrayToField(), Nektar::SolverUtils::MMFSystem::CopyBoundaryTrace(), Nektar::AcousticSystem::CopyBoundaryTrace(), Nektar::ShallowWaterSystem::CopyBoundaryTrace(), Nektar::SolverUtils::DriverArnoldi::CopyFieldToArnoldiArray(), Nektar::SolverUtils::EquationSystem::CopyFromPhysField(), Nektar::SolverUtils::DriverArnoldi::CopyFwdToAdj(), Nektar::Extrapolate::CopyPressureHBCsToPbndExp(), Nektar::SolverUtils::DriverPFASST::CopyQuadratureSolutionAndResidual(), Nektar::SolverUtils::DriverParallelInTime::CopySolutionVector(), Nektar::SolverUtils::EquationSystem::CopyToPhysField(), Nektar::GlobalMapping::Mapping::CovarFromCartesian(), Nektar::GlobalMapping::Mapping::CovarToCartesian(), Nektar::StdRegions::StdExpansion::CreateGeneralMatrix(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_1D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_1D(), Nektar::SolverUtils::MMFSystem::DeriveCrossProductMF(), DetermineclosePointxindex(), Nektar::LinearisedAdvection::DFT(), Nektar::SolverUtils::AdvectionFR::DivCFlux_1D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D_Gauss(), Nektar::LibUtilities::NekLinSysIterCGLoc::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterCG::DoConjugateGradient(), Nektar::SolverUtils::UnsteadySystem::DoDummyProjection(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGmresRestart(), Nektar::LibUtilities::NekLinSysIterGMRESLoc::DoGmresRestart(), Nektar::Bidomain::DoImplicitSolve(), Nektar::MultiRegions::GlobalLinSysPETSc::DoNekppOperation(), Nektar::LibUtilities::NekSysOperators::DoNekSysPrecon(), Nektar::PreconCfsBRJ::DoNullPrecon(), Nektar::AcousticSystem::DoOdeProjection(), Nektar::CFLtester::DoOdeProjection(), Nektar::MMFAdvection::DoOdeProjection(), Nektar::UnsteadyAdvection::DoOdeProjection(), Nektar::UnsteadyAdvectionDiffusion::DoOdeProjection(), Nektar::UnsteadyDiffusion::DoOdeProjection(), Nektar::UnsteadyInviscidBurger::DoOdeProjection(), Nektar::UnsteadyViscousBurgers::DoOdeProjection(), Nektar::CompressibleFlowSystem::DoOdeProjection(), Nektar::Dummy::DoOdeProjection(), Nektar::ImageWarpingSystem::DoOdeProjection(), Nektar::MMFMaxwell::DoOdeProjection(), Nektar::PulseWavePropagation::DoOdeProjection(), Nektar::LinearSWE::DoOdeProjection(), Nektar::NonlinearPeregrine::DoOdeProjection(), Nektar::NonlinearSWE::DoOdeProjection(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::NonlinearPeregrine::DoOdeRhs(), Nektar::MultiRegions::GlobalLinSysIterative::DoProjection(), Nektar::NekMatrix< DataType, StandardMatrixTag >::EigenSolve(), Nektar::CFSImplicit::ElmtVarInvMtrx(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_sort(), Nektar::SolverUtils::SessionFunction::Evaluate(), Nektar::IncNavierStokes::EvaluateAdvectionTerms(), Nektar::MMFAdvection::EvaluateAdvectionVelocity(), Nektar::MultiRegions::DisContField::EvaluateHDGPostProcessing(), Nektar::CompressibleFlowSystem::EvaluateIsentropicVortex(), Nektar::ForcingMovingBody::EvaluateStructDynModel(), Nektar::VortexWaveInteraction::ExecuteRoll(), Nektar::VortexWaveInteraction::FileRelaxation(), Nektar::MultiRegions::LocTraceToTraceMap::FindElmtNeighbors(), Nektar::LibUtilities::Basis::GenBasis(), Nektar::LocalRegions::NodalTriExp::GeneralMatrixOp_MatOp(), Nektar::LocalRegions::TetExp::GeneralMatrixOp_MatOp(), Nektar::MultiRegions::ExpList::GenerateElementVector(), GenerateNeighbourArrays(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GenPntwiseBodyFittedCoordSys(), Nektar::Collections::CoalescedGeomData::GetDerivFactors(), Nektar::MultiRegions::ExpList::GetExpIndex(), Nektar::NonlinearPeregrine::GetFluxVector(), Nektar::NonlinearSWE::GetFluxVector(), Nektar::CFSImplicit::GetFluxVectorJacDirElmt(), Nektar::Collections::CoalescedGeomData::GetJac(), Nektar::Collections::CoalescedGeomData::GetJacWithStdWeights(), Nektar::FieldUtils::ProcessMapping::GetMapping(), Nektar::SolverUtils::MMFSystem::GetMaxwellFlux1D(), Nektar::LocalRegions::Expansion::GetMF(), Nektar::FieldUtils::ProcessBodyFittedVelocity::GetVelAndConvertToCartSys(), Nektar::FieldUtils::ProcessCFL::GetVelocity(), Nektar::FieldUtils::ProcessVelocityDivergence::GetVelocity(), Nektar::FieldUtils::ProcessVorticity::GetVelocity(), Nektar::FieldUtils::ProcessWSS::GetVelocity(), Nektar::LinearSWE::GetVelocityVector(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), Nektar::MultiRegions::AssemblyMap::GlobalToLocalBnd(), Nektar::StdRegions::StdExpansion::H1(), Nektar::Collections::HexIProduct(), Nektar::MultiRegions::ExpListHomogeneous1D::Homogeneous1DTrans(), Nektar::LinearisedAdvection::ImportFldBase(), Nektar::ForcingMovingBody::InitialiseCableModel(), Nektar::SolverUtils::UnsteadySystem::InitializeSteadyState(), Nektar::LibUtilities::Interp1D(), Nektar::LibUtilities::Interp2D(), Nektar::LibUtilities::InterpCoeff1D(), Nektar::LibUtilities::InterpCoeff2D(), Nektar::SolverUtils::InterpExp1ToExp2(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocEdgesToTrace(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocEdgesToTraceTranspose(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocFacesToTrace(), Nektar::MultiRegions::LocTraceToTraceMap::InterpLocFacesToTraceTranspose(), Nektar::MultiRegions::LocTraceToTraceMap::InterpTraceToLocEdges(), Nektar::MultiRegions::LocTraceToTraceMap::InterpTraceToLocFaces(), Nektar::Collections::IProductWRTDerivBase_StdMat::IProductWRTDerivBase_StdMat(), Nektar::MultiRegions::ExpList::IProductWRTDirectionalDerivBase(), Nektar::MultiRegions::DisContField::L2_DGDeriv(), Nektar::NonlinearPeregrine::LaitoneSolitaryWave(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree_GenericImpl(), Nektar::MultiRegions::AssemblyMap::LocalBndToGlobal(), Nektar::GlobalMapping::Mapping::LowerIndex(), main(), MappingEVids(), Nektar::MultiRegions::GlobalMatrix::Multiply(), Nektar::CFSImplicit::MultiplyElmtInvMassPlusSource(), Nektar::ForcingMovingBody::Newmark_betaSolver(), Nektar::SpatialDomains::Geometry3D::NewtonIterationForLocCoord(), Nektar::CFSImplicit::NumCalcRiemFluxJac(), Nektar::SolverUtils::DiffusionLFRNS::NumericalFluxO1(), Nektar::DiffusionLDGNS::NumericalFluxO2(), Nektar::SolverUtils::DiffusionLFR::NumFluxforScalar(), Nektar::SolverUtils::DiffusionLDG::NumFluxforScalar(), Nektar::SolverUtils::DiffusionLDG::NumFluxforVector(), Nektar::Collections::IProductWRTDerivBase_MatrixFree::operator()(), Nektar::Collections::BwdTrans_SumFac_Seg::operator()(), Nektar::Collections::BwdTrans_SumFac_Quad::operator()(), Nektar::Collections::BwdTrans_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTBase_MatrixFree::operator()(), Nektar::Collections::BwdTrans_MatrixFree::operator()(), Nektar::Collections::Helmholtz_MatrixFree::operator()(), Nektar::Collections::PhysDeriv_MatrixFree::operator()(), Orderfunctionx(), Nektar::FieldUtils::OutputVtk::OutputFromExpLowOrder(), Nektar::Collections::PhysDeriv_StdMat::PhysDeriv_StdMat(), Nektar::LibUtilities::PhysGalerkinProject1D(), Nektar::LibUtilities::PhysGalerkinProject2D(), Nektar::StdRegions::StdExpansion2D::PhysTensorDeriv(), Nektar::StdRegions::StdExpansion3D::PhysTensorDeriv(), PolyFit(), PolyInterp(), Nektar::PressureInflowFileBC::PressureInflowFileBC(), Nektar::PressureMachTemperatureBC::PressureMachTemperatureBC(), Nektar::PressureOutflowBC::PressureOutflowBC(), Nektar::PressureOutflowNonReflectiveBC::PressureOutflowNonReflectiveBC(), Nektar::LinearSWE::PrimitiveToConservative(), Nektar::MMFSWE::PrimitiveToConservative(), Nektar::NonlinearPeregrine::PrimitiveToConservative(), Nektar::NonlinearSWE::PrimitiveToConservative(), Nektar::MMFMaxwell::Printout_SurfaceCurrent(), Nektar::FieldUtils::ProcessGrad::ProcessMappingFld(), Nektar::Collections::QuadIProduct(), Nektar::GlobalMapping::Mapping::RaiseIndex(), Nektar::MultiRegions::AssemblyMapDG::RealignTraceElement(), Nektar::LibUtilities::NekFFTW::Reshuffle_FFTW2Nek(), Nektar::LibUtilities::NekFFTW::Reshuffle_Nek2FFTW(), Nektar::SolverUtils::RiemannSolver::rotateFromNormal(), Nektar::SolverUtils::RiemannSolver::rotateToNormal(), Nektar::LocalRegions::Expansion3D::SetFaceToGeomOrientation(), Nektar::FieldUtils::ProcessEquiSpacedOutput::SetHomogeneousConnectivity(), Nektar::MultiRegions::ExpList::SetPhys(), Nektar::LibUtilities::NekLinSysIter::setUniversalUniqueMap(), Nektar::MultiRegions::LocTraceToTraceMap::Setup(), Nektar::NavierStokesCFE::SpecialBndTreat(), Nektar::StagnationInflowBC::StagnationInflowBC(), Nektar::UnsteadyAdvectionDiffusion::SubStepProjection(), Nektar::SubSteppingExtrapolate::SubStepProjection(), Diffusion::TimeIntegrate(), Nektar::CellModel::TimeIntegrate(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::TimeIntegrate(), Nektar::LibUtilities::TimeIntegrationSolutionGLM::TimeIntegrationSolutionGLM(), Nektar::LibUtilities::Transposition::TransposeXtoYZ(), Nektar::LibUtilities::Transposition::TransposeXYtoZ(), Nektar::LibUtilities::Transposition::TransposeYZtoX(), Nektar::LibUtilities::Transposition::TransposeYZtoZY(), Nektar::LibUtilities::Transposition::TransposeZtoXY(), Nektar::LibUtilities::Transposition::TransposeZYtoYZ(), Nektar::MultiRegions::AssemblyMap::UniversalAssembleBnd(), Nektar::VortexWaveInteraction::UpdateAlpha(), Nektar::LinearisedAdvection::UpdateBase(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateFirstQuadrature(), Nektar::MultiRegions::GlobalLinSysIterative::UpdateKnownSolutions(), Nektar::VortexWaveInteraction::UpdateWaveForceMag(), Nektar::LocalRegions::HexExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PrismExp::v_AlignVectorToCollapsedDir(), Nektar::IsentropicVortexBC::v_Apply(), Nektar::PressureMachTemperatureBC::v_Apply(), Nektar::RinglebFlowBC::v_Apply(), Nektar::SymmetryBC::v_Apply(), Nektar::WallBC::v_Apply(), Nektar::WallViscousBC::v_Apply(), Nektar::ForcingMovingBody::v_Apply(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelCovar(), Nektar::LocalRegions::Expansion3D::v_BuildInverseTransformationMatrix(), Nektar::LocalRegions::Expansion3D::v_BuildTransformationMatrix(), Nektar::MultiRegions::ExpList::v_BwdTrans(), Nektar::StdRegions::StdHexExp::v_BwdTrans(), Nektar::StdRegions::StdPointExp::v_BwdTrans(), Nektar::StdRegions::StdPrismExp::v_BwdTrans(), Nektar::StdRegions::StdPyrExp::v_BwdTrans(), Nektar::StdRegions::StdQuadExp::v_BwdTrans(), Nektar::StdRegions::StdSegExp::v_BwdTrans(), Nektar::StdRegions::StdTetExp::v_BwdTrans(), Nektar::StdRegions::StdHexExp::v_BwdTrans_SumFacKernel(), Nektar::StdRegions::StdQuadExp::v_BwdTrans_SumFacKernel(), Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs(), Nektar::LocalRegions::HexExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::QuadExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::GlobalMapping::MappingTranslation::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingTranslation::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXofZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_ContravarToCartesian(), Nektar::MappingExtrapolate::v_CorrectPressureBCs(), Nektar::GlobalMapping::MappingTranslation::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingTranslation::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarToCartesian(), Nektar::GlobalMapping::Mapping::v_CurlCurlField(), Nektar::MultiRegions::ExpListHomogeneous1D::v_DealiasedDotProd(), Nektar::MultiRegions::ExpListHomogeneous1D::v_DealiasedProd(), Nektar::MultiRegions::ExpListHomogeneous2D::v_DealiasedProd(), Nektar::SolverUtils::Diffusion3DHomogeneous1D::v_Diffuse(), Nektar::SolverUtils::DiffusionLFR::v_Diffuse(), Nektar::SolverUtils::DiffusionLFRNS::v_Diffuse(), Nektar::MultiRegions::PreconditionerNull::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerJacobi::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerLinear::v_DoPreconditionerWithNonVertOutput(), Nektar::EigenValuesAdvection::v_DoSolve(), Nektar::IterativeElasticSystem::v_DoSolve(), Nektar::LinearElasticSystem::v_DoSolve(), Nektar::MMFMaxwell::v_DoSolve(), Nektar::PulseWaveSystem::v_DoSolve(), Nektar::SolverUtils::DriverModifiedArnoldi::v_Execute(), Nektar::LocalRegions::HexExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::PrismExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::PyrExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::QuadExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::SegExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::TetExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::TriExp::v_ExtractDataToCoeffs(), Nektar::MultiRegions::ExpList::v_ExtractDataToCoeffs(), Nektar::MultiRegions::ExpListHomogeneous1D::v_ExtractDataToCoeffs(), Nektar::MultiRegions::ExpListHomogeneous2D::v_ExtractDataToCoeffs(), Nektar::MultiRegions::ExpList::v_ExtractPhysToBndElmt(), Nektar::MultiRegions::DisContField3DHomogeneous1D::v_ExtractTracePhys(), Nektar::LibUtilities::NekFFTW::v_FFTBwdTrans(), Nektar::LibUtilities::NekFFTW::v_FFTFwdTrans(), Nektar::MultiRegions::DisContField::v_FillBwdWithBoundCond(), Nektar::StdRegions::StdQuadExp::v_FillMode(), Nektar::StdRegions::StdHexExp::v_FillMode(), Nektar::StdRegions::StdSegExp::v_FillMode(), Nektar::StdRegions::StdTriExp::v_FillMode(), Nektar::LocalRegions::HexExp::v_FwdTrans(), Nektar::LocalRegions::PrismExp::v_FwdTrans(), Nektar::LocalRegions::PyrExp::v_FwdTrans(), Nektar::LocalRegions::QuadExp::v_FwdTrans(), Nektar::LocalRegions::SegExp::v_FwdTrans(), Nektar::LocalRegions::TetExp::v_FwdTrans(), Nektar::MultiRegions::ExpList2DHomogeneous2D::v_FwdTrans(), Nektar::StdRegions::StdHexExp::v_FwdTrans(), Nektar::StdRegions::StdPointExp::v_FwdTrans(), Nektar::StdRegions::StdQuadExp::v_FwdTrans(), Nektar::StdRegions::StdSegExp::v_FwdTrans(), Nektar::LocalRegions::QuadExp::v_FwdTransBndConstrained(), Nektar::LocalRegions::SegExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdQuadExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdSegExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdHexExp::v_GenMatrix(), Nektar::StdRegions::StdPrismExp::v_GenMatrix(), Nektar::StdRegions::StdQuadExp::v_GenMatrix(), Nektar::StdRegions::StdSegExp::v_GenMatrix(), Nektar::StdRegions::StdTetExp::v_GenMatrix(), Nektar::StdRegions::StdTriExp::v_GenMatrix(), Nektar::LocalRegions::Expansion1D::v_GenMatrix(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::MultiRegions::DisContField::v_GetBndElmtExpansion(), Nektar::MultiRegions::DisContField3DHomogeneous1D::v_GetBndElmtExpansion(), Nektar::MultiRegions::DisContField3DHomogeneous2D::v_GetBndElmtExpansion(), Nektar::MultiRegions::ExpList::v_GetBoundaryNormals(), Nektar::MultiRegions::DisContField3DHomogeneous1D::v_GetBoundaryNormals(), Nektar::GlobalMapping::Mapping::v_GetCartesianCoordinates(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_GetCoords(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_GetCoords(), Nektar::GlobalMapping::Mapping::v_GetCoordVelocity(), Nektar::NavierStokesImplicitCFE::v_GetFluxDerivJacDirctn(), Nektar::NavierStokesImplicitCFE::v_GetFluxDerivJacDirctnElmt(), Nektar::GlobalMapping::MappingGeneral::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingGeneral::v_GetJacobian(), Nektar::GlobalMapping::MappingXofXZ::v_GetJacobian(), Nektar::GlobalMapping::MappingGeneral::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXofXZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXofZ::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetMetricTensor(), Nektar::GlobalMapping::MappingXYofZ::v_GetMetricTensor(), Nektar::MultiRegions::ExpList::v_GetMovingFrames(), Nektar::IncNavierStokes::v_GetMovingFrameVelocities(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_GetNormals(), Nektar::LocalRegions::QuadExp::v_GetTracePhysVals(), Nektar::LocalRegions::TriExp::v_GetTracePhysVals(), Nektar::LocalRegions::QuadExp::v_GetTraceQFactors(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_InitializeScheme(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_InitializeScheme(), Nektar::LibUtilities::TimeIntegrationSchemeGEM::v_InitializeScheme(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::v_InitializeScheme(), Nektar::MMFDiffusion::v_InitObject(), Nektar::IterativeElasticSystem::v_InitObject(), Nektar::GlobalMapping::Mapping::v_InitObject(), Nektar::DiffusionLDGNS::v_InitObject(), Nektar::StdRegions::StdPointExp::v_IProductWRTBase(), Nektar::StdRegions::StdHexExp::v_IProductWRTBase_SumFacKernel(), Nektar::StdRegions::StdQuadExp::v_IProductWRTBase_SumFacKernel(), Nektar::MultiRegions::ExpListHomogeneous1D::v_IProductWRTDerivBase(), Nektar::MMFSWE::v_LinfError(), Nektar::GlobalMapping::MappingTranslation::v_LowerIndex(), Nektar::GlobalMapping::MappingXofXZ::v_LowerIndex(), Nektar::GlobalMapping::MappingXofZ::v_LowerIndex(), Nektar::LibUtilities::NekSys::v_NekSysInitialGuess(), Nektar::FieldUtils::OutputTecplot::v_OutputFromExp(), Nektar::MultiRegions::ExpList::v_PhysDirectionalDeriv(), Nektar::SolverUtils::Forcing::v_PreApply(), Nektar::SolverUtils::ForcingMovingReferenceFrame::v_PreApply(), Nektar::FieldUtils::OutputFileBase::v_Process(), Nektar::FieldUtils::ProcessAddFld::v_Process(), Nektar::FieldUtils::ProcessBodyFittedVelocity::v_Process(), Nektar::FieldUtils::ProcessC0Projection::v_Process(), Nektar::FieldUtils::ProcessCFL::v_Process(), Nektar::FieldUtils::ProcessGrad::v_Process(), Nektar::FieldUtils::ProcessHomogeneousStretch::v_Process(), Nektar::FieldUtils::ProcessJacobianEnergy::v_Process(), Nektar::FieldUtils::ProcessL2Criterion::v_Process(), Nektar::FieldUtils::ProcessMapping::v_Process(), Nektar::FieldUtils::ProcessNumModes::v_Process(), Nektar::FieldUtils::ProcessPointDataToFld::v_Process(), Nektar::FieldUtils::ProcessPowerSpectrum::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessQualityMetric::v_Process(), Nektar::FieldUtils::ProcessVelocityDivergence::v_Process(), Nektar::FieldUtils::ProcessVorticity::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::SolverUtils::FilterFieldConvert::v_ProcessSample(), Nektar::SolverUtils::FilterMaxMinFields::v_ProcessSample(), Nektar::GlobalMapping::MappingTranslation::v_RaiseIndex(), Nektar::GlobalMapping::MappingXofXZ::v_RaiseIndex(), Nektar::GlobalMapping::MappingXofZ::v_RaiseIndex(), Nektar::SolverUtils::CouplingCwipi::v_Receive(), Nektar::SolverUtils::CouplingFile::v_Receive(), Nektar::LocalRegions::HexExp::v_ReduceOrderCoeffs(), Nektar::LocalRegions::QuadExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdPrismExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdPyrExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdQuadExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdSegExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdTetExp::v_ReduceOrderCoeffs(), Nektar::APE::v_RiemannInvariantBC(), Nektar::LEE::v_RiemannInvariantBC(), Nektar::LinearisedAdvection::v_SetBaseFlow(), Nektar::IncNavierStokes::v_SetMovingFrameVelocities(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::VCSMapping::v_SetUpViscousForcing(), Nektar::MultiRegions::GlobalLinSysPETSc::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysPETScStaticCond::v_SolveLinearSystem(), Nektar::VCSMapping::v_SolvePressure(), Nektar::LibUtilities::NekLinSysIterFixedpointJacobi::v_SolveSystem(), Nektar::LibUtilities::NekNonlinSysNewton::v_SolveSystem(), Nektar::VCSMapping::v_SolveViscous(), Nektar::SubSteppingExtrapolate::v_SubStepSaveFields(), Nektar::LibUtilities::TimeIntegrationSchemeGEM::v_TimeIntegrate(), Nektar::MultiRegions::AssemblyMapCG::v_UniversalAssemble(), Nektar::GlobalMapping::Mapping::v_UpdateBCs(), Nektar::GlobalMapping::Mapping::v_UpdateMapping(), Nektar::GlobalMapping::Mapping::v_VelocityLaplacian(), Nektar::FieldUtils::OutputTecplot::v_WriteTecplotConnectivity(), Nektar::FieldUtils::OutputTecplotBinary::v_WriteTecplotConnectivity(), Nektar::MultiRegions::ExpList2DHomogeneous1D::v_WriteVtkPieceHeader(), Nektar::MultiRegions::ExpList3DHomogeneous1D::v_WriteVtkPieceHeader(), Vcopy(), Nektar::AcousticSystem::WallBC(), Nektar::LinearSWE::WallBoundary(), Nektar::NonlinearPeregrine::WallBoundary(), Nektar::NonlinearSWE::WallBoundary(), Nektar::LinearSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundary2D(), Nektar::NonlinearSWE::WallBoundary2D(), Nektar::MMFSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundaryContVariables(), Nektar::NonlinearPeregrine::WallBoundaryForcing(), Nektar::NonlinearPeregrine::WCESolve(), Nektar::SolverUtils::DiffusionLFR::WeakPenaltyforScalar(), Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1(), and Nektar::AcousticSystem::WhiteNoiseBC().

Vcopy() [6/6]

template void Vmath::Vcopy	(	int	n,
		const unsigned int *	x,
		const int	incx,
		unsigned int *	y,
		const int	incy
	)

Vdiv() [1/4]

template<class T >

void Vmath::Vdiv	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Multiply vector z = x/y.

Definition at line 115 of file VmathArray.hpp.

{
    ASSERTL1(static_cast<unsigned int>(n * incx) <= x.size() + x.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incy) <= y.size() + y.GetOffset(),
             "Array out of bounds");
    ASSERTL1(static_cast<unsigned int>(n * incz) <= z.size() + z.GetOffset(),
             "Array out of bounds");
 
    Vdiv(n, &x[0], incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Vdiv(), and Nektar::UnitTests::z().

Vdiv() [2/4]

template void Vmath::Vdiv	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vdiv() [3/4]

template void Vmath::Vdiv	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vdiv() [4/4]

template<class T >

void Vmath::Vdiv	(	int	n,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

Multiply vector z = x/y.

Definition at line 280 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1)
    {
        while (--n)
        {
            *z = (*x) / (*y);
            ++x;
            ++y;
            ++z;
        }
    }
    else
    {
        while (--n)
        {
            *z = (*x) / (*y);
            x += incx;
            y += incy;
            z += incz;
        }
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::VariableConverter::ApplyC0Smooth(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SpatialDomains::GeomFactors::ComputeDerivFactors(), Nektar::MMFSWE::ComputeEnstrophy(), Nektar::SpatialDomains::GeomFactors::ComputeGmat(), Nektar::LinearSWE::ConservativeToPrimitive(), Nektar::MMFSWE::ConservativeToPrimitive(), Nektar::NonlinearPeregrine::ConservativeToPrimitive(), Nektar::NonlinearSWE::ConservativeToPrimitive(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::VariableConverter::GetDynamicEnergy(), Nektar::VariableConverter::GetEnthalpy(), Nektar::VariableConverter::GetInternalEnergy(), Nektar::VariableConverter::GetMach(), Nektar::FieldUtils::ProcessVelocityDivergence::GetVelocity(), Nektar::FieldUtils::ProcessVorticity::GetVelocity(), Nektar::FieldUtils::ProcessWSS::GetVelocity(), Nektar::VariableConverter::GetVelocityVector(), Nektar::NonlinearPeregrine::GetVelocityVector(), Nektar::NonlinearSWE::GetVelocityVector(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), Nektar::SolverUtils::MMFSystem::GramSchumitz(), main(), Nektar::VCSMapping::MappingPressureCorrection(), Nektar::LEE::v_AddLinTerm(), Nektar::SolverUtils::AdvectionFR::v_Advect(), Nektar::PressureInflowFileBC::v_Apply(), Nektar::PressureOutflowBC::v_Apply(), Nektar::PressureOutflowNonReflectiveBC::v_Apply(), Nektar::RiemannInvariantBC::v_Apply(), Nektar::ForcingAxiSymmetric::v_Apply(), Nektar::ForcingQuasi1D::v_Apply(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelCovar(), Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs(), Nektar::LinearSWE::v_ConservativeToPrimitive(), Nektar::NonlinearPeregrine::v_ConservativeToPrimitive(), Nektar::NonlinearSWE::v_ConservativeToPrimitive(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarToCartesian(), Nektar::SolverUtils::DiffusionLFR::v_Diffuse(), Nektar::SolverUtils::DiffusionLFRNS::v_Diffuse(), Nektar::GlobalMapping::Mapping::v_Divergence(), Nektar::LocalRegions::Expansion::v_DivideByQuadratureMetric(), Nektar::APE::v_GetFluxVector(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetInvMetricTensor(), Nektar::ForcingQuasi1D::v_InitObject(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::LocalRegions::SegExp::v_PhysDeriv_s(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::GlobalMapping::MappingXofXZ::v_RaiseIndex(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::VCSMapping::v_SetUpViscousForcing(), Nektar::LocalRegions::HexExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PrismExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PyrExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::QuadExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TetExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TriExp::v_SVVLaplacianFilter(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), Vdiv(), Nektar::SpatialDomains::GeomFactors::VectorNormalise(), Nektar::MMFSWE::WallBoundary2D(), and Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1().

Vexp() [1/2]

template<class T >

void Vmath::Vexp	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

exp y = exp(x)

Definition at line 232 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Vexp(n, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Vexp().

Vexp() [2/2]

template<class T >

void Vmath::Vexp	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

exp y = exp(x)

Definition at line 127 of file Vmath.hpp.

{
    while (n--)
    {
        *y = exp(*x);
        x += incx;
        y += incy;
    }
}

Referenced by Nektar::CellModel::TimeIntegrate(), Nektar::CourtemancheRamirezNattel98::v_Update(), and Vexp().

Vlog() [1/2]

template<class T >

void Vmath::Vlog	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

log y = log(x)

Definition at line 221 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Vlog(n, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Vlog().

Vlog() [2/2]

template<class T >

void Vmath::Vlog	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

log y = log(x)

Definition at line 115 of file Vmath.hpp.

{
    while (n--)
    {
        *y = log(*x);
        x += incx;
        y += incy;
    }
}

References tinysimd::log().

Referenced by Nektar::CourtemancheRamirezNattel98::v_Update(), and Vlog().

Vmax() [1/5]

template<class T >

T Vmath::Vmax	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the maximum element in x – called vmax to avoid conflict with max.

Definition at line 494 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Vmax(n, &x[0], incx);
}

References ASSERTL1, and Vmax().

Vmax() [2/5]

template int Vmath::Vmax	(	int	n,
		const int *	x,
		const int	incx
	)

Vmax() [3/5]

template Nektar::NekDouble Vmath::Vmax	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Vmax() [4/5]

template Nektar::NekSingle Vmath::Vmax	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Vmax() [5/5]

template<class T >

T Vmath::Vmax	(	int	n,
		const T *	x,
		const int	incx
	)

Return the maximum element in x – called vmax to avoid conflict with max.

Definition at line 940 of file Vmath.cpp.

{
 
    T xmax = *x;
 
    while (n--)
    {
        if (*x > xmax)
        {
            xmax = *x;
        }
        x += incx;
    }
 
    return xmax;
}

Referenced by Nektar::NekMatrix< DataType, StandardMatrixTag >::AbsMaxtoMinEigenValueRatio(), Nektar::MultiRegions::AssemblyMapCG::AssemblyMapCG(), Nektar::VortexWaveInteraction::CalcL2ToLinfPressure(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::SolverUtils::UnsteadySystem::CheckSteadyState(), Computestreakpositions(), Nektar::SolverUtils::MMFSystem::ComputeZimYim(), Nektar::CoupledLocalToGlobalC0ContMap::CoupledLocalToGlobalC0ContMap(), EnforceRotationalSymmetry(), ExpandVertices(), Nektar::MMFMaxwell::GenerateSigmaPML(), Nektar::PulseWaveSystem::GetCommArray(), Nektar::FieldUtils::ProcessCFL::GetMaxStdVelocity(), Nektar::Extrapolate::GetMaxStdVelocity(), Nektar::VariableConverter::GetMuAv(), Nektar::VortexWaveInteraction::GetReflectionIndex(), Nektar::MultiRegions::ExpList::Linf(), main(), MappingEVids(), MoveOutsidePointsNnormpos(), Orderfunctionx(), Nektar::MMFDiffusion::PlanePhiWave(), Nektar::NonSmoothShockCapture::v_GetArtificialViscosity(), Nektar::MMFMaxwell::v_InitObject(), Nektar::FieldUtils::ProcessInterpField::v_Process(), Nektar::FieldUtils::ProcessInterpPoints::v_Process(), Nektar::FieldUtils::ProcessJacobianEnergy::v_Process(), Nektar::FilterBenchmark::v_Update(), Nektar::FieldUtils::OutputTecplotBinary::v_WriteTecplotZone(), and Vmax().

Vmin() [1/5]

template<class T >

T Vmath::Vmin	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Return the minimum element in x - called vmin to avoid conflict with min.

Definition at line 530 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Vmin(n, &x[0], incx);
}

References ASSERTL1, and Vmin().

Vmin() [2/5]

template int Vmath::Vmin	(	int	n,
		const int *	x,
		const int	incx
	)

Vmin() [3/5]

template Nektar::NekDouble Vmath::Vmin	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Vmin() [4/5]

template Nektar::NekSingle Vmath::Vmin	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Vmin() [5/5]

template<class T >

T Vmath::Vmin	(	int	n,
		const T *	x,
		const int	incx
	)

Return the minimum element in x - called vmin to avoid conflict with min.

Definition at line 1045 of file Vmath.cpp.

{
 
    T xmin = *x;
 
    while (n--)
    {
        if (*x < xmin)
        {
            xmin = *x;
        }
        x += incx;
    }
 
    return xmin;
}

Referenced by Nektar::NekMatrix< DataType, StandardMatrixTag >::AbsMaxtoMinEigenValueRatio(), Nektar::SpatialDomains::GeomFactors::CheckIfValid(), Computestreakpositions(), Nektar::SolverUtils::MMFSystem::ComputeZimYim(), Nektar::MMFMaxwell::GenerateSigmaPML(), Nektar::SolverUtils::MMFSystem::GetIncidentField(), Nektar::UnsteadyAdvectionDiffusion::GetSubstepTimeStep(), Nektar::SubSteppingExtrapolate::GetSubstepTimeStep(), main(), MoveOutsidePointsNnormpos(), Nektar::MMFDiffusion::PlanePhiWave(), Nektar::CompressibleFlowSystem::v_GetTimeStep(), Nektar::CFLtester::v_GetTimeStep(), Nektar::MMFMaxwell::v_InitObject(), Nektar::FieldUtils::ProcessInterpField::v_Process(), Nektar::FieldUtils::ProcessInterpPoints::v_Process(), Nektar::FieldUtils::ProcessJacobianEnergy::v_Process(), Nektar::FieldUtils::OutputTecplotBinary::v_WriteTecplotZone(), and Vmin().

Vmul() [1/5]

template<class T >

void Vmath::Vmul	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Multiply vector z = x*y.

Definition at line 68 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incx, incy, incz);
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vmul(n, &x[0], &y[0], &z[0]);
#else
    Vmul(n, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vmul(), Vmul(), and Nektar::UnitTests::z().

Vmul() [2/5]

template<class T >

void Vmath::Vmul	(	int	n,
		const Array< TwoD, NekDouble >::const_reference &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Definition at line 88 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Vmul(n, x.origin(), incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Vmul(), and Nektar::UnitTests::z().

Vmul() [3/5]

template void Vmath::Vmul	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vmul() [4/5]

template void Vmath::Vmul	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vmul() [5/5]

template<class T >

void Vmath::Vmul	(	int	n,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

Multiply vector z = x*y.

Definition at line 207 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1 && incz == 1)
    {
        while (--n)
        {
            *z = (*x) * (*y);
            ++x;
            ++y;
            ++z;
        }
    }
    else
    {
        while (--n)
        {
            *z = (*x) * (*y);
            x += incx;
            y += incy;
            z += incz;
        }
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::NekMatrix< DataType, StandardMatrixTag >::AbsMaxtoMinEigenValueRatio(), Nektar::UnsteadyAdvectionDiffusion::AddAdvectionPenaltyFlux(), Nektar::SubSteppingExtrapolate::AddAdvectionPenaltyFlux(), Nektar::MMFMaxwell::AddCoriolis(), Nektar::MMFSWE::AddCoriolis(), Nektar::LinearSWE::AddCoriolis(), Nektar::NonlinearPeregrine::AddCoriolis(), Nektar::NonlinearSWE::AddCoriolis(), Nektar::SolverUtils::MMFSystem::AdddedtMaxwell(), Nektar::MMFSWE::AddDivForGradient(), Nektar::LocalRegions::Expansion2D::AddEdgeBoundaryInt(), Nektar::MMFSWE::AddElevationEffect(), Nektar::MMFMaxwell::AddGreenDerivCompensate(), Nektar::LocalRegions::Expansion2D::AddHDGHelmholtzEdgeTerms(), Nektar::LocalRegions::Expansion3D::AddHDGHelmholtzFaceTerms(), Nektar::LocalRegions::Expansion2D::AddNormTraceInt(), Nektar::LocalRegions::Expansion3D::AddNormTraceInt(), Nektar::MMFMaxwell::AddPML(), Nektar::Extrapolate::AddPressureToOutflowBCs(), Nektar::MMFSWE::AddRotation(), Nektar::NonlinearPeregrine::AddVariableDepth(), Nektar::NonlinearSWE::AddVariableDepth(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::DiffusionLDGNS::ApplyBCsO2(), Nektar::SolverUtils::DiffusionLDG::ApplyVectorBCs(), Nektar::VortexWaveInteraction::CalcL2ToLinfPressure(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::FilterAeroForcesSPM::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::SolverUtils::ForcingAbsorption::CalculateForcing(), Nektar::LibUtilities::GaussPoints::CalculateGalerkinProjectionMatrix(), Nektar::GlobalMapping::MappingXYofXY::CalculateMetricTensor(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SolverUtils::MMFSystem::CartesianToMovingframes(), Nektar::MMFMaxwell::Checkpoint_EDFluxOutput(), Nektar::MMFMaxwell::Checkpoint_EnergyOutput(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::MMFMaxwell::Checkpoint_PlotOutput(), Nektar::MMFMaxwell::Checkpoint_TotPlotOutput(), Nektar::MMFSWE::Compute_demdt_cdot_ek(), Nektar::MMFSWE::ComputeEnergy(), Nektar::MMFSWE::ComputeEnstrophy(), Nektar::VelocityCorrectionScheme::ComputeGJPNormalVelocity(), Nektar::BidomainRoth::DoOdeRhs(), Nektar::MMFDiffusion::DoOdeRhs(), Nektar::ImageWarpingSystem::DoOdeRhs(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::MMFAdvection::EvaluateAdvectionVelocity(), Nektar::ArtificialDiffusion::GetFluxVector(), Nektar::CFLtester::GetFluxVector(), Nektar::EigenValuesAdvection::GetFluxVector(), Nektar::MMFAdvection::GetFluxVector(), Nektar::UnsteadyAdvection::GetFluxVector(), Nektar::UnsteadyInviscidBurger::GetFluxVector(), Nektar::ImageWarpingSystem::GetFluxVector(), Nektar::LinearSWE::GetFluxVector(), Nektar::NonlinearPeregrine::GetFluxVector(), Nektar::NonlinearSWE::GetFluxVector(), Nektar::UnsteadyAdvectionDiffusion::GetFluxVectorAdv(), Nektar::UnsteadyViscousBurgers::GetFluxVectorAdv(), Nektar::UnsteadyAdvection::GetFluxVectorDeAlias(), Nektar::CompressibleFlowSystem::GetFluxVectorDeAlias(), Nektar::VariableConverter::GetMach(), Nektar::FieldUtils::ProcessCFL::GetMaxStdVelocity(), Nektar::Extrapolate::GetMaxStdVelocity(), Nektar::MMFSWE::GetSWEFluxVector(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), Nektar::SolverUtils::MMFSystem::GramSchumitz(), Nektar::StdRegions::StdExpansion::H1(), Nektar::Collections::HexIProduct(), Nektar::LocalRegions::NodalTriExp::Integral(), Nektar::StdRegions::StdExpansion2D::Integral(), Nektar::FieldUtils::ProcessInnerProduct::IProduct(), Nektar::StdRegions::StdExpansion::L2(), Nektar::NonlinearPeregrine::LaitoneSolitaryWave(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree(), main(), Nektar::StdRegions::StdExpansion::MassMatrixOp_MatFree(), MoveOutsidePointsNnormpos(), Nektar::NekMultiplyDiagonalMatrix(), Nektar::DiffusionLDGNS::NumericalFluxO1(), Nektar::SolverUtils::DiffusionLFRNS::NumericalFluxO2(), Nektar::DiffusionLDGNS::NumericalFluxO2(), Nektar::SolverUtils::DiffusionLDG::NumFluxforScalar(), Nektar::SolverUtils::DiffusionLFR::NumFluxforVector(), Nektar::SolverUtils::DiffusionLDG::NumFluxforVector(), Nektar::Collections::IProductWRTDerivBase_StdMat::operator()(), Nektar::Collections::IProductWRTDerivBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Seg::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Quad::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tri::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tet::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Prism::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Pyr::operator()(), Nektar::Collections::Helmholtz_IterPerExp::operator()(), Nektar::Collections::IProductWRTBase_StdMat::operator()(), Nektar::Collections::IProductWRTBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTBase_SumFac_Seg::operator()(), Nektar::Collections::PhysDeriv_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_SumFac_Seg::operator()(), Nektar::Collections::PhysDeriv_SumFac_Quad::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tri::operator()(), Nektar::Collections::PhysDeriv_SumFac_Hex::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tet::operator()(), Nektar::Collections::PhysDeriv_SumFac_Prism::operator()(), Nektar::Collections::PhysDeriv_SumFac_Pyr::operator()(), Nektar::LocalRegions::NodalTriExp::PhysDeriv(), Nektar::PressureMachTemperatureBC::PressureMachTemperatureBC(), Nektar::LinearSWE::PrimitiveToConservative(), Nektar::MMFSWE::PrimitiveToConservative(), Nektar::NonlinearPeregrine::PrimitiveToConservative(), Nektar::NonlinearSWE::PrimitiveToConservative(), Nektar::Collections::PrismIProduct(), Nektar::Collections::PyrIProduct(), Nektar::Collections::QuadIProduct(), Nektar::LibUtilities::NekFFTW::Reshuffle_FFTW2Nek(), Nektar::LibUtilities::NekFFTW::Reshuffle_Nek2FFTW(), Nektar::SolverUtils::RiemannSolver::rotateFromNormal(), Nektar::SolverUtils::RiemannSolver::rotateToNormal(), Nektar::IncNavierStokes::SetMRFDomainVelBCs(), Nektar::IncNavierStokes::SetMRFWallBCs(), Nektar::IncNavierStokes::SetRadiationBoundaryForcing(), Nektar::CoupledLinearNS::SetUpCoupledMatrix(), Nektar::SolverUtils::MMFSystem::SetUpMovingFrames(), Nektar::SolverUtils::UnsteadySystem::SVVVarDiffCoeff(), Nektar::VelocityCorrectionScheme::SVVVarDiffCoeff(), Nektar::Collections::TetIProduct(), Nektar::Collections::TriIProduct(), Nektar::FilterMovingBody::UpdateForce(), Nektar::SmoothedProfileMethod::UpdateForcing(), Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt(), Nektar::LEE::v_AddLinTerm(), Nektar::SolverUtils::AdvectionNonConservative::v_Advect(), Nektar::SolverUtils::AdvectionFR::v_Advect(), Nektar::AdjointAdvection::v_Advect(), Nektar::AlternateSkewAdvection::v_Advect(), Nektar::LinearisedAdvection::v_Advect(), Nektar::NavierStokesAdvection::v_Advect(), Nektar::SkewSymmetricAdvection::v_Advect(), Nektar::LocalRegions::HexExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::NodalTriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PrismExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PyrExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::QuadExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TetExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TriExp::v_AlignVectorToCollapsedDir(), Nektar::ForcingAxiSymmetric::v_Apply(), Nektar::ForcingQuasi1D::v_Apply(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXofZ::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXYofXY::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXYofZ::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelCovar(), Nektar::GlobalMapping::MappingXofZ::v_ApplyChristoffelCovar(), Nektar::GlobalMapping::MappingXYofXY::v_ApplyChristoffelCovar(), Nektar::GlobalMapping::MappingXYofZ::v_ApplyChristoffelCovar(), Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXofZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarToCartesian(), Nektar::MappingExtrapolate::v_CorrectPressureBCs(), Nektar::GlobalMapping::MappingXofXZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarToCartesian(), Nektar::MultiRegions::ExpListHomogeneous1D::v_DealiasedProd(), Nektar::MultiRegions::ExpListHomogeneous2D::v_DealiasedProd(), Nektar::SolverUtils::DiffusionLFR::v_Diffuse(), Nektar::SolverUtils::DiffusionLFRNS::v_Diffuse(), Nektar::GlobalMapping::Mapping::v_Divergence(), Nektar::MultiRegions::PreconditionerDiagonal::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerJacobi::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerLinearWithLowEnergy::v_DoPreconditioner(), Nektar::MMFMaxwell::v_DoSolve(), Nektar::GlobalMapping::MappingXofXZ::v_DotGradJacobian(), Nektar::MultiRegions::PreconditionerLowEnergy::v_DoTransformBasisToLowEnergy(), Nektar::MultiRegions::PreconditionerLowEnergy::v_DoTransformCoeffsFromLowEnergy(), Nektar::MultiRegions::DisContField::v_EvaluateBoundaryConditions(), Nektar::MultiRegions::DisContField3DHomogeneous1D::v_EvaluateBoundaryConditions(), Nektar::SolverUtils::DriverAdaptive::v_Execute(), Nektar::SolverUtils::DriverModifiedArnoldi::v_Execute(), Nektar::StdRegions::StdQuadExp::v_FillMode(), Nektar::StdRegions::StdHexExp::v_FillMode(), Nektar::StdRegions::StdTriExp::v_FillMode(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::NavierStokesCFE::v_GetFluxPenalty(), Nektar::APE::v_GetFluxVector(), Nektar::LEE::v_GetFluxVector(), Nektar::GlobalMapping::MappingXofXZ::v_GetInvMetricTensor(), Nektar::GlobalMapping::MappingXYofXY::v_GetInvMetricTensor(), Nektar::SpatialDomains::Geometry3D::v_GetLocCoords(), Nektar::AcousticSystem::v_GetMaxStdVelocity(), Nektar::CompressibleFlowSystem::v_GetMaxStdVelocity(), Nektar::GlobalMapping::MappingXofXZ::v_GetMetricTensor(), Nektar::LocalRegions::QuadExp::v_GetTraceQFactors(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::NavierStokesCFE::v_GetViscousFluxVectorDeAlias(), Nektar::LocalRegions::SegExp::v_HelmholtzMatrixOp(), Nektar::BidomainRoth::v_InitObject(), Nektar::Monodomain::v_InitObject(), Nektar::MMFAdvection::v_InitObject(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::LocalRegions::HexExp::v_Integral(), Nektar::LocalRegions::PrismExp::v_Integral(), Nektar::LocalRegions::PyrExp::v_Integral(), Nektar::LocalRegions::QuadExp::v_Integral(), Nektar::LocalRegions::SegExp::v_Integral(), Nektar::LocalRegions::TetExp::v_Integral(), Nektar::LocalRegions::TriExp::v_Integral(), Nektar::StdRegions::StdSegExp::v_Integral(), Nektar::LocalRegions::SegExp::v_IProductWRTBase(), Nektar::StdRegions::StdPointExp::v_IProductWRTBase(), Nektar::StdRegions::StdSegExp::v_IProductWRTBase(), Nektar::StdRegions::StdSegExp::v_IProductWRTBase_SumFac(), Nektar::LocalRegions::SegExp::v_IProductWRTDerivBase(), Nektar::StdRegions::StdPrismExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdPyrExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTetExp::v_IProductWRTDerivBase_SumFac(), Nektar::StdRegions::StdTriExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::HexExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::MMFSWE::v_L2Error(), Nektar::LocalRegions::SegExp::v_LaplacianMatrixOp(), Nektar::MMFSWE::v_LinfError(), Nektar::GlobalMapping::MappingXofXZ::v_LowerIndex(), Nektar::GlobalMapping::MappingXofZ::v_LowerIndex(), Nektar::LocalRegions::Expansion::v_MultiplyByQuadratureMetric(), Nektar::StdRegions::StdHexExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdPrismExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdPyrExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdQuadExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdSegExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdTetExp::v_MultiplyByStdQuadratureMetric(), Nektar::StdRegions::StdTriExp::v_MultiplyByStdQuadratureMetric(), Nektar::LocalRegions::SegExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::HexExp::v_PhysDeriv(), Nektar::LocalRegions::PrismExp::v_PhysDeriv(), Nektar::LocalRegions::PyrExp::v_PhysDeriv(), Nektar::LocalRegions::TetExp::v_PhysDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDeriv(), Nektar::LocalRegions::TriExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv(), Nektar::StdRegions::StdTetExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv_n(), Nektar::LocalRegions::HexExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::TriExp::v_PhysDirectionalDeriv(), Nektar::LinearSWE::v_PrimitiveToConservative(), Nektar::NonlinearPeregrine::v_PrimitiveToConservative(), Nektar::NonlinearSWE::v_PrimitiveToConservative(), Nektar::FieldUtils::ProcessBodyFittedVelocity::v_Process(), Nektar::FieldUtils::ProcessCombineAvg::v_Process(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessPowerSpectrum::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::SolverUtils::FilterBodyFittedVelocity::v_ProcessSample(), Nektar::SolverUtils::FilterReynoldsStresses::v_ProcessSample(), Nektar::GlobalMapping::MappingXofXZ::v_RaiseIndex(), Nektar::GlobalMapping::MappingXofZ::v_RaiseIndex(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::MultiRegions::GlobalLinSysXxtStaticCond::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysXxtFull::v_SolveLinearSystem(), Nektar::VCSMapping::v_SolvePressure(), Nektar::SolverUtils::UnsteadySystem::v_SteadyStateResidual(), Nektar::CompressibleFlowSystem::v_SteadyStateResidual(), Nektar::LocalRegions::HexExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PrismExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PyrExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::QuadExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TetExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TriExp::v_SVVLaplacianFilter(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::CourtemancheRamirezNattel98::v_Update(), Nektar::CellModelFitzHughNagumo::v_Update(), Nektar::SolverUtils::FilterEnergy::v_Update(), Nektar::GlobalMapping::MappingXofZ::v_UpdateGeomInfo(), Nektar::GlobalMapping::MappingXYofXY::v_UpdateGeomInfo(), Nektar::GlobalMapping::MappingXYofZ::v_UpdateGeomInfo(), Nektar::LocalRegions::Expansion1D::v_VectorFlux(), Nektar::LocalRegions::Expansion2D::v_VectorFlux(), Nektar::SolverUtils::MMFSystem::VectorCrossProd(), Nektar::SpatialDomains::GeomFactors::VectorCrossProd(), Vmul(), Nektar::LinearSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundary2D(), Nektar::NonlinearSWE::WallBoundary2D(), Nektar::MMFSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundaryForcing(), Nektar::StdRegions::StdExpansion::WeakDerivMatrixOp_MatFree(), Nektar::MMFAdvection::WeakDGDirectionalAdvection(), Nektar::StdRegions::StdExpansion::WeakDirectionalDerivMatrixOp_MatFree(), Nektar::SolverUtils::DiffusionLFR::WeakPenaltyforVector(), Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1(), and Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO2().

Vpow() [1/2]

template<class T >

void Vmath::Vpow	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		const T	f,
		Array< OneD, T > &	y,
		const int	incy
	)

pow y = pow(x, f)

Definition at line 243 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Vpow(n, &x[0], incx, f, &y[0], incy);
}

References ASSERTL1, and Vpow().

Vpow() [2/2]

template<class T >

void Vmath::Vpow	(	int	n,
		const T *	x,
		const int	incx,
		const T	f,
		T *	y,
		const int	incy
	)

pow y = pow(x, f)

Definition at line 139 of file Vmath.hpp.

{
    while (n--)
    {
        *y = pow(*x, f);
        x += incx;
        y += incy;
    }
}

Referenced by Nektar::CourtemancheRamirezNattel98::v_Update(), and Vpow().

Vsqrt() [1/4]

template<class T >

void Vmath::Vsqrt	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		Array< OneD, T > &	y,
		const int	incy
	)

sqrt y = sqrt(x)

Definition at line 254 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
 
    Vsqrt(n, &x[0], incx, &y[0], incy);
}

References ASSERTL1, and Vsqrt().

Vsqrt() [2/4]

template void Vmath::Vsqrt	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		Nektar::NekDouble *	y,
		const int	incy
	)

Vsqrt() [3/4]

template void Vmath::Vsqrt	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		Nektar::NekSingle *	y,
		const int	incy
	)

Vsqrt() [4/4]

template<class T >

void Vmath::Vsqrt	(	int	n,
		const T *	x,
		const int	incx,
		T *	y,
		const int	incy
	)

sqrt y = sqrt(x)

Definition at line 529 of file Vmath.cpp.

{
    while (n--)
    {
        *y = sqrt(*x);
        x += incx;
        y += incy;
    }
}

References tinysimd::sqrt().

Referenced by Nektar::SolverUtils::MMFSystem::AdddedtMaxwell(), Nektar::VortexWaveInteraction::CalcL2ToLinfPressure(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SolverUtils::MMFSystem::CheckMovingFrames(), Nektar::MMFMaxwell::Checkpoint_EnergyOutput(), Nektar::SpatialDomains::GeomFactors::ComputeDerivFactors(), Nektar::SpatialDomains::GeomFactors::ComputeJac(), Nektar::VariableConverter::GetAbsoluteVelocity(), Nektar::VariableConverter::GetMach(), main(), Nektar::SolverUtils::UnsteadySystem::SVVVarDiffCoeff(), Nektar::VelocityCorrectionScheme::SVVVarDiffCoeff(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::SolverUtils::MMFSystem::v_GenerateSummary(), Nektar::FilterElectrogram::v_Initialise(), Nektar::MMFSWE::v_L2Error(), Nektar::MMFSWE::v_LinfError(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessSurfDistance::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::LocalRegions::HexExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PrismExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PyrExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::QuadExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TetExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TriExp::v_SVVLaplacianFilter(), Nektar::SolverUtils::MMFSystem::VectorAvgMagnitude(), Nektar::SpatialDomains::GeomFactors::VectorNormalise(), and Vsqrt().

Vstvpp() [1/3]

template void Vmath::Vstvpp	(	int	n,
		const Nektar::NekDouble	alpha,
		const Nektar::NekDouble *	v,
		int	incv,
		const Nektar::NekDouble *	w,
		int	incw,
		const Nektar::NekDouble *	x,
		int	incx,
		Nektar::NekDouble *	z,
		int	incz
	)

Vstvpp() [2/3]

template void Vmath::Vstvpp	(	int	n,
		const Nektar::NekSingle	alpha,
		const Nektar::NekSingle *	v,
		int	incv,
		const Nektar::NekSingle *	w,
		int	incw,
		const Nektar::NekSingle *	x,
		int	incx,
		Nektar::NekSingle *	z,
		int	incz
	)

Vstvpp() [3/3]

template<class T >

void Vmath::Vstvpp	(	int	n,
		const T	alpha,
		const T *	v,
		int	incv,
		const T *	w,
		int	incw,
		const T *	x,
		int	incx,
		T *	z,
		int	incz
	)

Vstvpp (scalar times vector plus vector plus vector):

Definition at line 772 of file Vmath.cpp.

{
    while (n--)
    {
        *z = alpha * (*v) + (*w) + (*x);
        v += incv;
        w += incw;
        x += incx;
        z += incz;
    }
}

References Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vsub() [1/4]

template<class T >

void Vmath::Vsub	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Subtract vector z = x-y.

Definition at line 180 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Vsub(n, &x[0], incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Vsub(), and Nektar::UnitTests::z().

Vsub() [2/4]

template void Vmath::Vsub	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vsub() [3/4]

template void Vmath::Vsub	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vsub() [4/4]

template<class T >

void Vmath::Vsub	(	int	n,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

Subtract vector z = x-y.

Definition at line 414 of file Vmath.cpp.

{
    ++n;
    if (incx == 1 && incy == 1 && incz == 1)
    {
        while (--n)
        {
            *z = (*x) - (*y);
            ++x;
            ++y;
            ++z;
        }
    }
    else
    {
        while (--n)
        {
            *z = (*x) - (*y);
            x += incx;
            y += incy;
            z += incz;
        }
    }
}

References Nektar::UnitTests::z().

Referenced by Nektar::UnsteadyAdvectionDiffusion::AddAdvectionPenaltyFlux(), Nektar::SubSteppingExtrapolate::AddAdvectionPenaltyFlux(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::AddFASCorrectionToSFint(), Nektar::MMFMaxwell::AddPML(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::CFSImplicit::CalcTraceNumericalFlux(), Nektar::GlobalMapping::MappingGeneral::CalculateChristoffel(), Nektar::GlobalMapping::MappingXYofXY::CalculateChristoffel(), Nektar::FilterAeroForcesSPM::CalculateForces(), Nektar::SolverUtils::ForcingAbsorption::CalculateForcing(), Nektar::FieldUtils::ProcessPhiFromFile::CheckHit(), Nektar::SolverUtils::MMFSystem::ComputeCurl(), Nektar::MMFSWE::ComputeEnergy(), Nektar::SolverUtils::DriverPFASST::ComputeFASCorrection(), Nektar::MMFMaxwell::ComputeMaterialMicroWaveCloak(), Nektar::MMFMaxwell::ComputeRadCloak(), Nektar::LinearSWE::ConservativeToPrimitive(), Nektar::MMFSWE::ConservativeToPrimitive(), Nektar::NonlinearPeregrine::ConservativeToPrimitive(), Nektar::NonlinearSWE::ConservativeToPrimitive(), Nektar::SolverUtils::DriverPFASST::Correct(), Nektar::SolverUtils::DiffusionLFR::DerCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DerCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFR::DivCFlux_2D_Gauss(), Nektar::SolverUtils::DiffusionLFRNS::DivCFlux_2D_Gauss(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::MMFAdvection::EvaluateAdvectionVelocity(), Nektar::CoupledLinearNS::EvaluateNewtonRHS(), Nektar::MMFMaxwell::GenerateSigmaPML(), Nektar::VariableConverter::GetInternalEnergy(), Nektar::VariableConverter::GetSensor(), Nektar::FieldUtils::ProcessWSS::GetViscosity(), Nektar::StdRegions::StdExpansion::H1(), Nektar::StdRegions::StdExpansion::L2(), Nektar::MultiRegions::DisContField::L2_DGDeriv(), Nektar::SolverUtils::MMFSystem::LaxFriedrichMaxwellFlux1D(), Nektar::StdRegions::StdExpansion::Linf(), main(), Nektar::VCSMapping::MappingPressureCorrection(), Nektar::CFSImplicit::MatrixMultiplyMatrixFreeCoeff(), Nektar::CFSImplicit::NonlinSysEvaluatorCoeff(), Nektar::CFSImplicit::NumCalcRiemFluxJac(), Nektar::SolverUtils::DiffusionLDG::NumFluxforVector(), Nektar::SolverUtils::DriverParareal::PararealCorrection(), Nektar::SmoothedProfileMethod::SolveCorrectedVelocity(), Nektar::MMFSWE::TestVorticityComputation(), Nektar::CellModel::TimeIntegrate(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::TimeIntegrate(), Nektar::SmoothedProfileMethod::UpdateForcing(), Nektar::SolverUtils::MMFSystem::UpwindMaxwellFlux1D(), Nektar::ForcingAxiSymmetric::v_Apply(), Nektar::ForcingMovingBody::v_Apply(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_ComputeInitialGuess(), Nektar::LinearSWE::v_ConservativeToPrimitive(), Nektar::NonlinearPeregrine::v_ConservativeToPrimitive(), Nektar::NonlinearSWE::v_ConservativeToPrimitive(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXofZ::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_ContravarFromCartesian(), Nektar::MappingExtrapolate::v_CorrectPressureBCs(), Nektar::GlobalMapping::MappingXofXZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXofZ::v_CovarToCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarToCartesian(), Nektar::MultiRegions::ExpList::v_Curl(), Nektar::MultiRegions::ExpList::v_CurlCurl(), Nektar::GlobalMapping::Mapping::v_CurlCurlField(), Nektar::SolverUtils::Diffusion3DHomogeneous1D::v_Diffuse(), Nektar::MultiRegions::PreconditionerJacobi::v_DoPreconditioner(), Nektar::SolverUtils::DriverAdaptive::v_Execute(), Nektar::LocalRegions::QuadExp::v_FwdTransBndConstrained(), Nektar::LocalRegions::SegExp::v_FwdTransBndConstrained(), Nektar::LocalRegions::TriExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdQuadExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdSegExp::v_FwdTransBndConstrained(), Nektar::StdRegions::StdTriExp::v_FwdTransBndConstrained(), Nektar::NavierStokesCFE::v_GetFluxPenalty(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::GlobalMapping::Mapping::v_gradgradU(), Nektar::SolverUtils::DiffusionIP::v_InitObject(), Nektar::MMFSWE::v_L2Error(), Nektar::MMFSWE::v_LinfError(), Nektar::NavierStokesImplicitCFE::v_MinusDiffusionFluxJacPoint(), Nektar::FieldUtils::ProcessCombineAvg::v_Process(), Nektar::FieldUtils::ProcessDisplacement::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessStreamFunction::v_Process(), Nektar::FieldUtils::ProcessSurfDistance::v_Process(), Nektar::FieldUtils::ProcessVorticity::v_Process(), Nektar::GlobalMapping::MappingXofXZ::v_RaiseIndex(), Nektar::GlobalMapping::MappingXofZ::v_RaiseIndex(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_ResidualEval(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_ResidualEval(), Nektar::LibUtilities::IMEXTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::LibUtilities::ImplicitTimeIntegrationSchemeSDC::v_SDCIterationLoop(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::MultiRegions::GlobalLinSysIterativeFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysPETScFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysStaticCond::v_Solve(), Nektar::MultiRegions::GlobalLinSysXxtFull::v_Solve(), Nektar::MultiRegions::GlobalLinSysDirectFull::v_Solve(), Nektar::VCSMapping::v_SolvePressure(), Nektar::LibUtilities::NekLinSysIterFixedpointJacobi::v_SolveSystem(), Nektar::LibUtilities::NekNonlinSysNewton::v_SolveSystem(), Nektar::SolverUtils::UnsteadySystem::v_SteadyStateResidual(), Nektar::LibUtilities::TimeIntegrationSchemeGEM::v_TimeIntegrate(), Nektar::CourtemancheRamirezNattel98::v_Update(), Nektar::CellModelFitzHughNagumo::v_Update(), Nektar::SolverUtils::FilterEnergy::v_Update(), Nektar::SolverUtils::FilterModalEnergy::v_Update(), Nektar::GlobalMapping::Mapping::v_VelocityLaplacian(), Nektar::FieldUtils::ProcessPhiFromFile::Vector2edge(), Vsub(), and Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1().

Vsum() [1/5]

template<class T >

T Vmath::Vsum	(	int	n,
		const Array< OneD, const T > &	x,
		const int	incx
	)

Subtract return sum(x)

Definition at line 476 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    return Vsum(n, &x[0], incx);
}

References ASSERTL1, and Vsum().

Vsum() [2/5]

template int Vmath::Vsum	(	int	n,
		const int *	x,
		const int	incx
	)

Vsum() [3/5]

template Nektar::NekDouble Vmath::Vsum	(	int	n,
		const Nektar::NekDouble *	x,
		const int	incx
	)

Vsum() [4/5]

template Nektar::NekSingle Vmath::Vsum	(	int	n,
		const Nektar::NekSingle *	x,
		const int	incx
	)

Vsum() [5/5]

template<class T >

T Vmath::Vsum	(	int	n,
		const T *	x,
		const int	incx
	)

Subtract return sum(x)

Definition at line 890 of file Vmath.cpp.

{
 
    T sum = 0;
 
    while (n--)
    {
        sum += (*x);
        x += incx;
    }
 
    return sum;
}

Referenced by Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::MultiRegions::GlobalLinSysPETSc::CalculateReordering(), Nektar::SolverUtils::MMFSystem::ComputencdotMF(), Nektar::MultiRegions::AssemblyMapCG::CreateGraph(), Nektar::MultiRegions::DisContField::FindPeriodicTraces(), Nektar::PulseWaveSystem::GetCommArray(), Nektar::VariableConverter::GetMuAv(), Nektar::StdRegions::StdExpansion2D::Integral(), Nektar::SpatialDomains::Geometry3D::NewtonIterationForLocCoord(), Nektar::SpatialDomains::Geometry2D::NewtonIterationForLocCoord(), Nektar::FieldUtils::ProcessWallNormalData::NewtonIterForLocCoordOnBndElmt(), Nektar::SpatialDomains::MeshPartition::PartitionGraph(), Nektar::PulseWaveSystem::SetUpDomainInterfaceBCs(), Nektar::SolverUtils::DriverAdaptive::v_Execute(), Nektar::StdRegions::StdExpansion3D::v_Integral(), Nektar::StdRegions::StdSegExp::v_Integral(), Nektar::SolverUtils::UnsteadySystem::v_SteadyStateResidual(), Nektar::CompressibleFlowSystem::v_SteadyStateResidual(), Nektar::SolverUtils::FilterAeroForces::v_Update(), Nektar::FieldUtils::OutputTecplot::v_WriteTecplotZone(), Nektar::FieldUtils::OutputTecplotBinary::v_WriteTecplotZone(), and Vsum().

Vvtvm() [1/4]

template<class T >

void Vmath::Vvtvm	(	int	n,
		const Array< OneD, const T > &	w,
		const int	incw,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

vvtvm (vector times vector minus vector): z = w*x - y

Definition at line 317 of file VmathArray.hpp.

{
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incw, incx, incy, incz);
    ASSERTL1(incw == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vvtvm(n, &w[0], &x[0], &y[0], &z[0]);
#else
    Vvtvm(n, &w[0], incw, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vvtvm(), Vvtvm(), Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vvtvm() [2/4]

template void Vmath::Vvtvm	(	int	n,
		const Nektar::NekDouble *	w,
		const int	incw,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vvtvm() [3/4]

template void Vmath::Vvtvm	(	int	n,
		const Nektar::NekSingle *	w,
		const int	incw,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vvtvm() [4/4]

template<class T >

void Vmath::Vvtvm	(	int	n,
		const T *	w,
		const int	incw,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

vvtvm (vector times vector minus vector): z = w*x - y

Definition at line 593 of file Vmath.cpp.

{
    while (n--)
    {
        *z = (*w) * (*x) - (*y);
        w += incw;
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Referenced by Nektar::MMFMaxwell::AddGreenDerivCompensate(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::MMFMaxwell::Checkpoint_EDFluxOutput(), Nektar::SolverUtils::RiemannSolver::rotateFromNormal(), Nektar::SolverUtils::RiemannSolver::rotateToNormal(), Nektar::SmoothedProfileMethod::SolveCorrectedVelocity(), Nektar::LEE::v_AddLinTerm(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarToCartesian(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::GlobalMapping::MappingXYofXY::v_UpdateGeomInfo(), Nektar::SolverUtils::MMFSystem::VectorCrossProd(), Nektar::SpatialDomains::GeomFactors::VectorCrossProd(), Vvtvm(), Nektar::LinearSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundary2D(), Nektar::NonlinearSWE::WallBoundary2D(), Nektar::MMFSWE::WallBoundary2D(), and Nektar::NonlinearPeregrine::WallBoundaryForcing().

Vvtvp() [1/5]

template<class T >

void Vmath::Vvtvp	(	int	n,
		const Array< OneD, const T > &	w,
		const int	incw,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

vvtvp (vector times vector plus vector): z = w*x + y

Definition at line 278 of file VmathArray.hpp.

{
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incw, incx, incy, incz);
    ASSERTL1(incw == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vvtvp(n, &w[0], &x[0], &y[0], &z[0]);
#else
    Vvtvp(n, &w[0], incw, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vvtvp(), Vvtvp(), Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vvtvp() [2/5]

template<class T >

void Vmath::Vvtvp	(	int	n,
		const Array< TwoD, NekDouble >::const_reference &	w,
		const int	incw,
		const Array< OneD, const T > &	x,
		const int	incx,
		const Array< OneD, const T > &	y,
		const int	incy,
		Array< OneD, T > &	z,
		const int	incz
	)

Vvtvp (vector times vector plus vector): z = w*x + y.

Definition at line 302 of file VmathArray.hpp.

{
    ASSERTL1(n * incw <= w.size(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
    Vvtvp(n, w.origin(), incw, &x[0], incx, &y[0], incy, &z[0], incz);
}

References ASSERTL1, Vvtvp(), Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vvtvp() [3/5]

template void Vmath::Vvtvp	(	int	n,
		const Nektar::NekDouble *	w,
		const int	incw,
		const Nektar::NekDouble *	x,
		const int	incx,
		const Nektar::NekDouble *	y,
		const int	incy,
		Nektar::NekDouble *	z,
		const int	incz
	)

Vvtvp() [4/5]

template void Vmath::Vvtvp	(	int	n,
		const Nektar::NekSingle *	w,
		const int	incw,
		const Nektar::NekSingle *	x,
		const int	incx,
		const Nektar::NekSingle *	y,
		const int	incy,
		Nektar::NekSingle *	z,
		const int	incz
	)

Vvtvp() [5/5]

template<class T >

void Vmath::Vvtvp	(	int	n,
		const T *	w,
		const int	incw,
		const T *	x,
		const int	incx,
		const T *	y,
		const int	incy,
		T *	z,
		const int	incz
	)

vvtvp (vector times vector plus vector): z = w*x + y

Definition at line 569 of file Vmath.cpp.

{
    while (n--)
    {
        *z = (*w) * (*x) + (*y);
        w += incw;
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Referenced by Nektar::SubSteppingExtrapolate::AddAdvectionPenaltyFlux(), Nektar::SolverUtils::MMFSystem::AdddedtMaxwell(), Nektar::MMFMaxwell::AddPML(), Nektar::MMFSWE::AddRotation(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::VortexWaveInteraction::CalcL2ToLinfPressure(), Nektar::VortexWaveInteraction::CalcNonLinearWaveForce(), Nektar::Extrapolate::CalcOutflowBCs(), Nektar::GlobalMapping::MappingGeneral::CalculateChristoffel(), Nektar::GlobalMapping::MappingXYofXY::CalculateChristoffel(), Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::GlobalMapping::MappingXYofXY::CalculateMetricTensor(), Nektar::GlobalMapping::MappingGeneral::CalculateMetricTerms(), Nektar::SolverUtils::MMFSystem::CartesianToMovingframes(), Nektar::SpatialDomains::GeomFactors::CheckIfValid(), Nektar::SolverUtils::MMFSystem::CheckMovingFrames(), Nektar::MMFMaxwell::Checkpoint_EnergyOutput(), Nektar::MMFSWE::Checkpoint_Output_Cartesian(), Nektar::MMFMaxwell::Checkpoint_PlotOutput(), Nektar::MMFMaxwell::Checkpoint_TotPlotOutput(), Nektar::MMFSWE::Compute_demdt_cdot_ek(), Nektar::SolverUtils::MMFSystem::Computedemdxicdote(), Nektar::SpatialDomains::GeomFactors::ComputeDerivFactors(), Nektar::SolverUtils::MMFSystem::ComputeDivCurlMF(), Nektar::MMFSWE::ComputeEnergy(), Nektar::MMFMaxwell::ComputeEnergyDensity(), Nektar::VelocityCorrectionScheme::ComputeGJPNormalVelocity(), Nektar::SpatialDomains::GeomFactors::ComputeGmat(), Nektar::LocalRegions::Expansion::ComputeGmatcdotMF(), Nektar::SpatialDomains::GeomFactors::ComputeJac(), Nektar::SpatialDomains::GeomFactors::ComputeMovingFrames(), Nektar::MMFAdvection::ComputeNablaCdotVelocity(), Nektar::MMFSWE::ComputeNablaCdotVelocity(), Nektar::MMFMaxwell::ComputeSurfaceCurrent(), Nektar::MMFAdvection::ComputeveldotMF(), Nektar::MMFSWE::ComputeVorticity(), Nektar::MMFMaxwell::DoOdeRhs(), Nektar::VariableConverter::GetAbsoluteVelocity(), Nektar::VariableConverter::GetDynamicEnergy(), Nektar::VariableConverter::GetMach(), Nektar::FieldUtils::ProcessCFL::GetMaxStdVelocity(), Nektar::Extrapolate::GetMaxStdVelocity(), Nektar::LocalRegions::Expansion2D::GetnEdgecdotMF(), Nektar::LocalRegions::Expansion3D::GetnFacecdotMF(), Nektar::UnsteadyAdvectionDiffusion::GetNormalVel(), Nektar::CFLtester::GetNormalVelocity(), Nektar::EigenValuesAdvection::GetNormalVelocity(), Nektar::MMFAdvection::GetNormalVelocity(), Nektar::UnsteadyAdvection::GetNormalVelocity(), Nektar::UnsteadyInviscidBurger::GetNormalVelocity(), Nektar::ImageWarpingSystem::GetNormalVelocity(), Nektar::UnsteadyViscousBurgers::GetNormalVelocity(), Nektar::SolverUtils::MMFSystem::GramSchumitz(), Nektar::StdRegions::StdExpansion::H1(), Nektar::StdRegions::StdExpansion::LinearAdvectionDiffusionReactionMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion::LinearAdvectionMatrixOp_MatFree(), main(), Nektar::VCSMapping::MappingAccelerationCorrection(), Nektar::VCSMapping::MappingAdvectionCorrection(), Nektar::SolverUtils::DiffusionLFRNS::NumericalFluxO1(), Nektar::SolverUtils::DiffusionLFRNS::NumericalFluxO2(), Nektar::DiffusionLDGNS::NumericalFluxO2(), Nektar::Collections::IProductWRTDerivBase_StdMat::operator()(), Nektar::Collections::IProductWRTDerivBase_IterPerExp::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Seg::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Quad::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tri::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Hex::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Tet::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Prism::operator()(), Nektar::Collections::IProductWRTDerivBase_SumFac_Pyr::operator()(), Nektar::Collections::Helmholtz_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_StdMat::operator()(), Nektar::Collections::PhysDeriv_IterPerExp::operator()(), Nektar::Collections::PhysDeriv_SumFac_Quad::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tri::operator()(), Nektar::Collections::PhysDeriv_SumFac_Hex::operator()(), Nektar::Collections::PhysDeriv_SumFac_Tet::operator()(), Nektar::Collections::PhysDeriv_SumFac_Prism::operator()(), Nektar::Collections::PhysDeriv_SumFac_Pyr::operator()(), Nektar::LocalRegions::NodalTriExp::PhysDeriv(), Nektar::SolverUtils::RiemannSolver::rotateFromNormal(), Nektar::SolverUtils::RiemannSolver::rotateToNormal(), Nektar::IncNavierStokes::SetZeroNormalVelocity(), Nektar::NavierStokesCFE::SpecialBndTreat(), Nektar::SolverUtils::UnsteadySystem::SVVVarDiffCoeff(), Nektar::VelocityCorrectionScheme::SVVVarDiffCoeff(), Nektar::CellModel::TimeIntegrate(), Nektar::FilterMovingBody::UpdateForce(), Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt(), Nektar::LEE::v_AddLinTerm(), Nektar::SolverUtils::AdvectionNonConservative::v_Advect(), Nektar::AdjointAdvection::v_Advect(), Nektar::AlternateSkewAdvection::v_Advect(), Nektar::LinearisedAdvection::v_Advect(), Nektar::NavierStokesAdvection::v_Advect(), Nektar::SkewSymmetricAdvection::v_Advect(), Nektar::PressureInflowFileBC::v_Apply(), Nektar::PressureOutflowBC::v_Apply(), Nektar::PressureOutflowNonReflectiveBC::v_Apply(), Nektar::RiemannInvariantBC::v_Apply(), Nektar::SymmetryBC::v_Apply(), Nektar::WallBC::v_Apply(), Nektar::GlobalMapping::MappingGeneral::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXofXZ::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingXYofXY::v_ApplyChristoffelContravar(), Nektar::GlobalMapping::MappingGeneral::v_ApplyChristoffelCovar(), Nektar::GlobalMapping::MappingXYofXY::v_ApplyChristoffelCovar(), Nektar::GlobalMapping::MappingXYofZ::v_ApplyChristoffelCovar(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::GlobalMapping::MappingGeneral::v_ContravarFromCartesian(), Nektar::GlobalMapping::MappingGeneral::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXofXZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_ContravarToCartesian(), Nektar::GlobalMapping::MappingGeneral::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofXY::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingXYofZ::v_CovarFromCartesian(), Nektar::GlobalMapping::MappingGeneral::v_CovarToCartesian(), Nektar::MultiRegions::ExpListHomogeneous1D::v_DealiasedDotProd(), Nektar::MultiRegions::PreconditionerJacobi::v_DoPreconditioner(), Nektar::GlobalMapping::Mapping::v_DotGradJacobian(), Nektar::GlobalMapping::MappingXofXZ::v_DotGradJacobian(), Nektar::SolverUtils::MMFSystem::v_GenerateSummary(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::APE::v_GetFluxVector(), Nektar::LEE::v_GetFluxVector(), Nektar::SpatialDomains::Geometry3D::v_GetLocCoords(), Nektar::AcousticSystem::v_GetMaxStdVelocity(), Nektar::CompressibleFlowSystem::v_GetMaxStdVelocity(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::NavierStokesCFE::v_GetViscousFluxVectorDeAlias(), Nektar::LocalRegions::SegExp::v_HelmholtzMatrixOp(), Nektar::FilterElectrogram::v_Initialise(), Nektar::MMFDiffusion::v_InitObject(), Nektar::MMFSWE::v_L2Error(), Nektar::LocalRegions::SegExp::v_LaplacianMatrixOp(), Nektar::LocalRegions::HexExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::GlobalMapping::Mapping::v_LowerIndex(), Nektar::LocalRegions::SegExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::HexExp::v_PhysDeriv(), Nektar::LocalRegions::PrismExp::v_PhysDeriv(), Nektar::LocalRegions::PyrExp::v_PhysDeriv(), Nektar::LocalRegions::TetExp::v_PhysDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDeriv(), Nektar::LocalRegions::TriExp::v_PhysDeriv(), Nektar::StdRegions::StdTriExp::v_PhysDeriv(), Nektar::LocalRegions::HexExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::TriExp::v_PhysDirectionalDeriv(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessPowerSpectrum::v_Process(), Nektar::FieldUtils::ProcessQCriterion::v_Process(), Nektar::FieldUtils::ProcessScalGrad::v_Process(), Nektar::FieldUtils::ProcessSurfDistance::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::GlobalMapping::Mapping::v_RaiseIndex(), Nektar::APE::v_RiemannInvariantBC(), Nektar::LEE::v_RiemannInvariantBC(), Nektar::CellModelAlievPanfilov::v_Update(), Nektar::SolverUtils::FilterEnergy::v_Update(), Nektar::FilterElectrogram::v_Update(), Nektar::LocalRegions::Expansion1D::v_VectorFlux(), Nektar::LocalRegions::Expansion2D::v_VectorFlux(), Nektar::SolverUtils::MMFSystem::VectorAvgMagnitude(), Nektar::SolverUtils::MMFSystem::VectorDotProd(), Nektar::SpatialDomains::GeomFactors::VectorNormalise(), Vvtvp(), Nektar::AcousticSystem::WallBC(), Nektar::LinearSWE::WallBoundary(), Nektar::NonlinearPeregrine::WallBoundary(), Nektar::NonlinearSWE::WallBoundary(), Nektar::LinearSWE::WallBoundary2D(), Nektar::NonlinearPeregrine::WallBoundary2D(), Nektar::NonlinearSWE::WallBoundary2D(), Nektar::MMFSWE::WallBoundary2D(), and Nektar::NonlinearPeregrine::WallBoundaryForcing().

Vvtvvtm() [1/4]

template<class T >

void Vmath::Vvtvvtm	(	int	n,
		const Array< OneD, const T > &	v,
		int	incv,
		const Array< OneD, const T > &	w,
		int	incw,
		const Array< OneD, const T > &	x,
		int	incx,
		const Array< OneD, const T > &	y,
		int	incy,
		Array< OneD, T > &	z,
		int	incz
	)

vvtvvtm (vector times vector minus vector times vector): z = v*w - x*y

Definition at line 394 of file VmathArray.hpp.

{
    ASSERTL1(n * incv <= v.size() + v.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incv, incw, incx, incy, incz);
    ASSERTL1(incw == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vvtvvtm(n, &v[0], &w[0], &x[0], &y[0], &z[0]);
#else
    Vvtvvtm(n, &v[0], incv, &w[0], incw, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vvtvvtm(), Vvtvvtm(), Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vvtvvtm() [2/4]

template void Vmath::Vvtvvtm	(	int	n,
		const Nektar::NekDouble *	v,
		int	incv,
		const Nektar::NekDouble *	w,
		int	incw,
		const Nektar::NekDouble *	x,
		int	incx,
		const Nektar::NekDouble *	y,
		int	incy,
		Nektar::NekDouble *	z,
		int	incz
	)

Vvtvvtm() [3/4]

template void Vmath::Vvtvvtm	(	int	n,
		const Nektar::NekSingle *	v,
		int	incv,
		const Nektar::NekSingle *	w,
		int	incw,
		const Nektar::NekSingle *	x,
		int	incx,
		const Nektar::NekSingle *	y,
		int	incy,
		Nektar::NekSingle *	z,
		int	incz
	)

Vvtvvtm() [4/4]

template<class T >

void Vmath::Vvtvvtm	(	int	n,
		const T *	v,
		int	incv,
		const T *	w,
		int	incw,
		const T *	x,
		int	incx,
		const T *	y,
		int	incy,
		T *	z,
		int	incz
	)

vvtvvtm (vector times vector minus vector times vector):

Definition at line 716 of file Vmath.cpp.

{
    while (n--)
    {
        *z = (*v) * (*w) - (*x) * (*y);
        v += incv;
        w += incw;
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Referenced by Nektar::SpatialDomains::GeomFactors::Adjoint(), Nektar::SpatialDomains::GeomFactors::CheckIfValid(), and Vvtvvtm().

Vvtvvtp() [1/4]

template<class T >

void Vmath::Vvtvvtp	(	int	n,
		const Array< OneD, const T > &	v,
		int	incv,
		const Array< OneD, const T > &	w,
		int	incw,
		const Array< OneD, const T > &	x,
		int	incx,
		const Array< OneD, const T > &	y,
		int	incy,
		Array< OneD, T > &	z,
		int	incz
	)

vvtvvtp (vector times vector plus vector times vector): z = v*w + x*y

Definition at line 367 of file VmathArray.hpp.

{
    ASSERTL1(n * incv <= v.size() + v.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incw <= w.size() + w.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incy <= y.size() + y.GetOffset(), "Array out of bounds");
    ASSERTL1(n * incz <= z.size() + z.GetOffset(), "Array out of bounds");
 
#ifdef NEKTAR_ENABLE_SIMD_VMATH
    boost::ignore_unused(incv, incw, incx, incy, incz);
    ASSERTL1(incw == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incx == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incy == 1, "Simd vmath requires inc = 1");
    ASSERTL1(incz == 1, "Simd vmath requires inc = 1");
    SIMD::Vvtvvtp(n, &v[0], &w[0], &x[0], &y[0], &z[0]);
#else
    Vvtvvtp(n, &v[0], incv, &w[0], incw, &x[0], incx, &y[0], incy, &z[0], incz);
#endif
}

References ASSERTL1, Vmath::SIMD::Vvtvvtp(), Vvtvvtp(), Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Vvtvvtp() [2/4]

template void Vmath::Vvtvvtp	(	int	n,
		const Nektar::NekDouble *	v,
		int	incv,
		const Nektar::NekDouble *	w,
		int	incw,
		const Nektar::NekDouble *	x,
		int	incx,
		const Nektar::NekDouble *	y,
		int	incy,
		Nektar::NekDouble *	z,
		int	incz
	)

Vvtvvtp() [3/4]

template void Vmath::Vvtvvtp	(	int	n,
		const Nektar::NekSingle *	v,
		int	incv,
		const Nektar::NekSingle *	w,
		int	incw,
		const Nektar::NekSingle *	x,
		int	incx,
		const Nektar::NekSingle *	y,
		int	incy,
		Nektar::NekSingle *	z,
		int	incz
	)

Vvtvvtp() [4/4]

template<class T >

void Vmath::Vvtvvtp	(	int	n,
		const T *	v,
		int	incv,
		const T *	w,
		int	incw,
		const T *	x,
		int	incx,
		const T *	y,
		int	incy,
		T *	z,
		int	incz
	)

vvtvvtp (vector times vector plus vector times vector):

Definition at line 687 of file Vmath.cpp.

{
    while (n--)
    {
        *z = (*v) * (*w) + (*x) * (*y);
        v += incv;
        w += incw;
        x += incx;
        y += incy;
        z += incz;
    }
}

References Nektar::UnitTests::w(), and Nektar::UnitTests::z().

Referenced by Nektar::SolverUtils::FilterAeroForces::CalculateForces(), Nektar::SolverUtils::FilterAeroForces::CalculateForcesMapping(), Nektar::SolverUtils::AdvectionFR::DivCFlux_2D(), Nektar::ImageWarpingSystem::DoOdeRhs(), Nektar::NonlinearPeregrine::DoOdeRhs(), Nektar::SolverUtils::RiemannSolver::rotateFromNormal(), Nektar::SolverUtils::RiemannSolver::rotateToNormal(), Nektar::SolverUtils::AdvectionFR::v_Advect(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LEE::v_GetFluxVector(), Nektar::FilterElectrogram::v_Initialise(), Nektar::LocalRegions::HexExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::QuadExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::TriExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), Nektar::FilterElectrogram::v_Update(), and Vvtvvtp().

Zero() [1/6]

template<class T >

void Vmath::Zero	(	int	n,
		Array< OneD, T > &	x,
		const int	incx
	)

Zero vector.

Definition at line 204 of file VmathArray.hpp.

{
    ASSERTL1(n * incx <= x.size() + x.GetOffset(), "Array out of bounds");
 
    Zero(n, &x[0], incx);
}

References ASSERTL1, and Zero().

Zero() [2/6]

template void Vmath::Zero	(	int	n,
		int *	x,
		const int	incx
	)

Zero() [3/6]

template void Vmath::Zero	(	int	n,
		long *	x,
		const int	incx
	)

Zero() [4/6]

template void Vmath::Zero	(	int	n,
		Nektar::NekDouble *	x,
		const int	incx
	)

Zero() [5/6]

template void Vmath::Zero	(	int	n,
		Nektar::NekSingle *	x,
		const int	incx
	)

Zero() [6/6]

template<class T >

void Vmath::Zero	(	int	n,
		T *	x,
		const int	incx
	)

Zero vector.

Definition at line 487 of file Vmath.cpp.

{
    if (incx == 1)
    {
        std::memset(x, '\0', n * sizeof(T));
    }
    else
    {
        T zero = 0;
        ++n;
        while (--n)
        {
            *x = zero;
            x += incx;
        }
    }
}

Referenced by Nektar::CFSImplicit::AddMatNSBlkDiagVol(), Nektar::SolverUtils::DiffusionIP::AddSecondDerivToTrace(), Nektar::SolverUtils::DiffusionIP::AddSymmFluxIntegralToCoeff(), Nektar::SolverUtils::DiffusionIP::AddSymmFluxIntegralToPhys(), Nektar::MultiRegions::ExpList::AddTraceJacToElmtJac(), Nektar::MultiRegions::GJPStabilisation::Apply(), Nektar::DiffusionLDGNS::ApplyBCsO1(), Nektar::DiffusionLDGNS::ApplyBCsO2(), Nektar::SolverUtils::DiffusionIP::ApplyFluxBndConds(), Nektar::SolverUtils::DiffusionLDG::ApplyVectorBCs(), Nektar::MultiRegions::AssemblyMap::AssembleBnd(), Nektar::SolverUtils::DiffusionIP::CalcTraceNumFlux(), Nektar::MMFMaxwell::Checkpoint_EnergyOutput(), Nektar::MMFAdvection::ComputeNablaCdotVelocity(), Nektar::MMFSWE::ComputeNablaCdotVelocity(), Nektar::SolverUtils::DriverPFASST::Correct(), Nektar::CoupledAssemblyMap::CoupledAssemblyMap(), Nektar::StdRegions::StdExpansion::CreateGeneralMatrix(), Nektar::LinearisedAdvection::DFT(), Nektar::MultiRegions::Preconditioner::DoAssembleLoc(), Nektar::LibUtilities::NekLinSysIterCGLoc::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterCG::DoConjugateGradient(), Nektar::LibUtilities::NekLinSysIterGMRES::DoGMRES(), Nektar::UnsteadyReactionDiffusion::DoOdeRhs(), Nektar::Dummy::DoOdeRhs(), Nektar::MultiRegions::GlobalLinSysIterative::DoProjection(), Nektar::NekMatrix< DataType, StandardMatrixTag >::EigenSolve(), Nektar::SolverUtils::DriverModifiedArnoldi::EV_big(), Nektar::GlobalMapping::Mapping::EvaluateFunction(), Nektar::IsentropicVortexBC::EvaluateIsentropicVortex(), Nektar::CompressibleFlowSystem::EvaluateIsentropicVortex(), Nektar::MMFSWE::EvaluateWaterDepth(), ExpList_LoadField(), Nektar::SolverUtils::CouplingCwipi::ExtrapolateFields(), Nektar::VariableConverter::GetAbsoluteVelocity(), Nektar::VariableConverter::GetDynamicEnergy(), Nektar::MultiRegions::ExpList::GetElmtNormalLength(), Nektar::LinearSWE::GetFluxVector(), Nektar::SolverUtils::MMFSystem::GetIncidentField(), Nektar::MultiRegions::ExpList::GetMatIpwrtDeriveBase(), Nektar::FieldUtils::ProcessCFL::GetMaxStdVelocity(), Nektar::Extrapolate::GetMaxStdVelocity(), Nektar::SolverUtils::MMFSystem::GetMaxwellFlux1D(), Nektar::SolverUtils::MMFSystem::GetMaxwellFlux2D(), Nektar::UnsteadyAdvectionDiffusion::GetNormalVel(), Nektar::CFLtester::GetNormalVelocity(), Nektar::EigenValuesAdvection::GetNormalVelocity(), Nektar::MMFAdvection::GetNormalVelocity(), Nektar::UnsteadyAdvection::GetNormalVelocity(), Nektar::UnsteadyInviscidBurger::GetNormalVelocity(), Nektar::ImageWarpingSystem::GetNormalVelocity(), Nektar::UnsteadyViscousBurgers::GetNormalVelocity(), Nektar::SolverUtils::EquationSystem::ImportFld(), Nektar::SolverUtils::EquationSystem::ImportFldToMultiDomains(), Nektar::SolverUtils::DriverPFASST::Interpolate(), Nektar::Collections::IProductWRTDerivBase_StdMat::IProductWRTDerivBase_StdMat(), Nektar::StdRegions::StdExpansion::LaplacianMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion::LinearAdvectionDiffusionReactionMatrixOp_MatFree(), Nektar::StdRegions::StdExpansion::LinearAdvectionMatrixOp_MatFree(), Nektar::CellModel::LoadCellModel(), main(), Nektar::VCSMapping::MappingAccelerationCorrection(), Nektar::VCSMapping::MappingAdvectionCorrection(), Nektar::PreconCfsBRJ::MinusOffDiag2Rhs(), MoveOutsidePointsNnormpos(), Nektar::Collections::BwdTrans_SumFac_Prism::operator()(), Nektar::Collections::BwdTrans_SumFac_Pyr::operator()(), Nektar::Collections::PhysDeriv_StdMat::operator()(), Nektar::Collections::PhysDeriv_IterPerExp::operator()(), Nektar::MultiRegions::AssemblyMap::PatchAssemble(), Nektar::Collections::PhysDeriv_StdMat::PhysDeriv_StdMat(), Nektar::SolverUtils::DriverPFASST::Restrict(), Nektar::FieldUtils::Iso::SeparateRegions(), Nektar::VarcoeffHashingTest::setupContFieldSolve(), Nektar::CoupledLinearNS::SetUpCoupledMatrix(), Nektar::PulseWaveSystem::SetUpDomainInterfaces(), Nektar::VelocityCorrectionScheme::SetupFlowrate(), Nektar::MultiRegions::AssemblyMapCG::SetUpUniversalC0ContMap(), Nektar::CoupledLinearNS::SolveLinearNS(), Nektar::NavierStokesCFE::SpecialBndTreat(), Nektar::LocalRegions::Expansion::StdDerivBaseOnTraceMat(), Diffusion::TimeIntegrate(), Nektar::LibUtilities::TimeIntegrationAlgorithmGLM::TimeIntegrate(), Nektar::LinearisedAdvection::UpdateBase(), Nektar::FilterMovingBody::UpdateForce(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateIntegratedResidualQFint(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateIntegratedResidualSFint(), Nektar::LibUtilities::TimeIntegrationSchemeSDC::UpdateLastQuadrature(), Nektar::LEE::v_AddLinTerm(), Nektar::NoAdvection::v_Advect(), Nektar::WallBC::v_Apply(), Nektar::WallViscousBC::v_Apply(), Nektar::MultiRegions::AssemblyMapCG::v_Assemble(), Nektar::NavierStokesImplicitCFE::v_CalcMuDmuDT(), Nektar::LocalRegions::NodalTriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::QuadExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TriExp::v_ComputeTraceNormal(), Nektar::LocalRegions::HexExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PrismExp::v_ComputeTraceNormal(), Nektar::LocalRegions::PyrExp::v_ComputeTraceNormal(), Nektar::LocalRegions::TetExp::v_ComputeTraceNormal(), Nektar::MultiRegions::ExpListHomogeneous1D::v_DealiasedDotProd(), Nektar::MultiRegions::ExpListHomogeneous2D::v_DealiasedDotProd(), Nektar::GlobalMapping::Mapping::v_Divergence(), Nektar::MultiRegions::PreconditionerBlock::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerDiagonal::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerJacobi::v_DoPreconditioner(), Nektar::MultiRegions::PreconditionerLinear::v_DoPreconditionerWithNonVertOutput(), Nektar::Laplace::v_DoSolve(), Nektar::Projection::v_DoSolve(), Nektar::SteadyAdvectionDiffusion::v_DoSolve(), Nektar::GlobalMapping::MappingTranslation::v_DotGradJacobian(), Nektar::GlobalMapping::MappingXofZ::v_DotGradJacobian(), Nektar::GlobalMapping::MappingXYofZ::v_DotGradJacobian(), Nektar::VCSImplicit::v_EvaluateAdvection_SetPressureBCs(), Nektar::SolverUtils::EquationSystem::v_EvaluateExactSolution(), Nektar::LocalRegions::HexExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::PrismExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::QuadExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::SegExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::TetExp::v_ExtractDataToCoeffs(), Nektar::LocalRegions::TriExp::v_ExtractDataToCoeffs(), Nektar::MultiRegions::DisContField::v_ExtractTracePhys(), Nektar::StdRegions::StdNodalPrismExp::v_FillMode(), Nektar::StdRegions::StdNodalTetExp::v_FillMode(), Nektar::StdRegions::StdNodalTriExp::v_FillMode(), Nektar::LocalRegions::Expansion1D::v_GenMatrix(), Nektar::LocalRegions::Expansion2D::v_GenMatrix(), Nektar::LocalRegions::Expansion3D::v_GenMatrix(), Nektar::NavierStokesImplicitCFE::v_GetFluxDerivJacDirctnElmt(), Nektar::APE::v_GetFluxVector(), Nektar::MultiRegions::DisContField::v_GetFwdBwdTracePhys(), Nektar::NavierStokesCFE::v_GetViscousFluxVector(), Nektar::NavierStokesCFEAxisym::v_GetViscousFluxVector(), Nektar::NavierStokesCFE::v_GetViscousFluxVectorDeAlias(), Nektar::MultiRegions::DisContField::v_HelmSolve(), Nektar::GlobalMapping::Mapping::v_InitObject(), Nektar::MultiRegions::AssemblyMapCG::v_LinearSpaceMap(), Nektar::LocalRegions::SegExp::v_PhysDeriv_n(), Nektar::LocalRegions::SegExp::v_PhysDeriv_s(), Nektar::FieldUtils::ProcessC0Projection::v_Process(), Nektar::FieldUtils::ProcessHomogeneousStretch::v_Process(), Nektar::FieldUtils::ProcessInterpField::v_Process(), Nektar::FieldUtils::ProcessInterpPoints::v_Process(), Nektar::FieldUtils::ProcessMultiShear::v_Process(), Nektar::FieldUtils::ProcessScalGrad::v_Process(), Nektar::FieldUtils::ProcessSurfDistance::v_Process(), Nektar::FieldUtils::ProcessWSS::v_Process(), Nektar::SolverUtils::FilterBodyFittedVelocity::v_ProcessSample(), Nektar::LocalRegions::HexExp::v_ReduceOrderCoeffs(), Nektar::LocalRegions::QuadExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdQuadExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdSegExp::v_ReduceOrderCoeffs(), Nektar::StdRegions::StdTetExp::v_ReduceOrderCoeffs(), Nektar::SolverUtils::EquationSystem::v_SetInitialConditions(), Nektar::MMFDiffusion::v_SetInitialConditions(), Nektar::VCSMapping::v_SetUpPressureForcing(), Nektar::VelocityCorrectionScheme::v_SetUpViscousForcing(), Nektar::VCSImplicit::v_SetUpViscousForcing(), Nektar::MultiRegions::GlobalLinSysIterativeFull::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysIterativeStaticCond::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysPETSc::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysPETScStaticCond::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysXxtStaticCond::v_SolveLinearSystem(), Nektar::MultiRegions::GlobalLinSysXxtFull::v_SolveLinearSystem(), Nektar::CourtemancheRamirezNattel98::v_Update(), Nektar::SolverUtils::FilterEnergy::v_Update(), Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO1(), Nektar::SolverUtils::DiffusionLFRNS::WeakPenaltyO2(), Zero(), and Nektar::SolverUtils::EquationSystem::ZeroPhysFields().