Nektar++
HexExp.h
Go to the documentation of this file.
1///////////////////////////////////////////////////////////////////////////////
2//
3// File: HexExp.h
4//
5// For more information, please see: http://www.nektar.info
6//
7// The MIT License
8//
9// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
10// Department of Aeronautics, Imperial College London (UK), and Scientific
11// Computing and Imaging Institute, University of Utah (USA).
12//
13// Permission is hereby granted, free of charge, to any person obtaining a
14// copy of this software and associated documentation files (the "Software"),
15// to deal in the Software without restriction, including without limitation
16// the rights to use, copy, modify, merge, publish, distribute, sublicense,
17// and/or sell copies of the Software, and to permit persons to whom the
18// Software is furnished to do so, subject to the following conditions:
19//
20// The above copyright notice and this permission notice shall be included
21// in all copies or substantial portions of the Software.
22//
23// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
24// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
25// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
26// THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
27// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
28// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
29// DEALINGS IN THE SOFTWARE.
30//
31// Description: Header routines for Hex expansion
32//
33///////////////////////////////////////////////////////////////////////////////
34
35#ifndef HEXEXP_H
36#define HEXEXP_H
37
38#include <LibUtilities/BasicUtils/NekManager.hpp> // for NekManager
39
45
46namespace Nektar
47{
48namespace LocalRegions
49{
50class HexExp : virtual public StdRegions::StdHexExp, virtual public Expansion3D
51{
52public:
54 const LibUtilities::BasisKey &Bb,
55 const LibUtilities::BasisKey &Bc,
57
59
60 LOCAL_REGIONS_EXPORT virtual ~HexExp() override = default;
61
62protected:
63 //------------------------------
64 // Integration Method
65 //------------------------------
67 const Array<OneD, const NekDouble> &inarray) override;
68
69 //-----------------------------
70 // Differentiation Methods
71 //-----------------------------
73 const Array<OneD, const NekDouble> &inarray,
75 Array<OneD, NekDouble> &out_d2) override;
76
78 const int dir, const Array<OneD, const NekDouble> &inarray,
79 Array<OneD, NekDouble> &outarray) override;
80
82 const Array<OneD, const NekDouble> &inarray,
83 const Array<OneD, const NekDouble> &direction,
84 Array<OneD, NekDouble> &out) override;
85
86 //---------------------------------------
87 // Transforms
88 //---------------------------------------
90 const Array<OneD, const NekDouble> &inarray,
91 Array<OneD, NekDouble> &outarray) override;
92
93 //---------------------------------------
94 // Inner product functions
95 //---------------------------------------
97 const Array<OneD, const NekDouble> &inarray,
98 Array<OneD, NekDouble> &outarray) override;
99
101 const Array<OneD, const NekDouble> &inarray,
102 Array<OneD, NekDouble> &outarray,
103 bool multiplybyweights = true) override;
104
106 const int dir, const Array<OneD, const NekDouble> &inarray,
107 Array<OneD, NekDouble> &outarray) override;
108
110 const int dir, const Array<OneD, const NekDouble> &inarray,
111 Array<OneD, NekDouble> &outarray) override;
112
114 const int dir, const Array<OneD, const NekDouble> &inarray,
115 Array<OneD, Array<OneD, NekDouble>> &outarray) override;
116
118 const Array<OneD, const NekDouble> &direction,
119 const Array<OneD, const NekDouble> &inarray,
120 Array<OneD, NekDouble> &outarray) override
121 {
122 IProductWRTDirectionalDerivBase_SumFac(direction, inarray, outarray);
123 }
124
126 const Array<OneD, const NekDouble> &direction,
127 const Array<OneD, const NekDouble> &inarray,
128 Array<OneD, NekDouble> &outarray) override;
129
130 //---------------------------------------
131 // Evaluation functions
132 //---------------------------------------
134 const Array<OneD, const NekDouble> &Lcoord,
135 const Array<OneD, const NekDouble> &physvals) override;
136
138 const Array<OneD, const NekDouble> &coords,
139 const Array<OneD, const NekDouble> &physvals) override;
140
142 const Array<OneD, NekDouble> &coord,
143 const Array<OneD, const NekDouble> &inarray,
144 std::array<NekDouble, 3> &firstOrderDerivs) override;
145
146 LOCAL_REGIONS_EXPORT virtual void v_GetCoord(
147 const Array<OneD, const NekDouble> &Lcoords,
148 Array<OneD, NekDouble> &coords) override;
149
152 Array<OneD, NekDouble> &coords_3) override;
153
154 //---------------------------------------
155 // Helper functions
156 //---------------------------------------
158 const override;
159
161 void) const override;
162
164 void) const override;
165
167 const NekDouble *data, const std::vector<unsigned int> &nummodes,
168 const int mode_offset, NekDouble *coeffs,
169 std::vector<LibUtilities::BasisType> &fromType) override;
170
172 const int face, Array<OneD, int> &outarray) override;
173
174 LOCAL_REGIONS_EXPORT void v_ComputeTraceNormal(const int face) override;
175
176 //---------------------------------------
177 // Operator creation functions
178 //---------------------------------------
180 const Array<OneD, const NekDouble> &inarray,
181 Array<OneD, NekDouble> &outarray,
182 const StdRegions::StdMatrixKey &mkey) override;
183
185 const Array<OneD, const NekDouble> &inarray,
186 Array<OneD, NekDouble> &outarray,
187 const StdRegions::StdMatrixKey &mkey) override;
188
190 const int k1, const int k2, const Array<OneD, const NekDouble> &inarray,
191 Array<OneD, NekDouble> &outarray,
192 const StdRegions::StdMatrixKey &mkey) override;
193
195 const int i, const Array<OneD, const NekDouble> &inarray,
196 Array<OneD, NekDouble> &outarray,
197 const StdRegions::StdMatrixKey &mkey) override;
198
200 const Array<OneD, const NekDouble> &inarray,
201 Array<OneD, NekDouble> &outarray,
202 const StdRegions::StdMatrixKey &mkey) override;
203
205 const Array<OneD, const NekDouble> &inarray,
206 Array<OneD, NekDouble> &outarray,
207 const StdRegions::StdMatrixKey &mkey) override;
208
210 const Array<OneD, const NekDouble> &inarray,
211 Array<OneD, NekDouble> &outarray,
212 const StdRegions::StdMatrixKey &mkey) override;
213
215 int numMin, const Array<OneD, const NekDouble> &inarray,
216 Array<OneD, NekDouble> &outarray) override;
217
220 const StdRegions::StdMatrixKey &mkey) override;
221
222 //---------------------------------------
223 // Matrix creation functions
224 //---------------------------------------
226 const StdRegions::StdMatrixKey &mkey) override;
227
229 const StdRegions::StdMatrixKey &mkey) override;
230
232 const MatrixKey &mkey) override;
233
234 LOCAL_REGIONS_EXPORT void v_DropLocMatrix(const MatrixKey &mkey) override;
235
237 const MatrixKey &mkey) override;
238
240 const MatrixKey &mkey) override;
241
242 LOCAL_REGIONS_EXPORT virtual void v_ComputeLaplacianMetric() override;
243
244private:
249
251 const Array<OneD, const NekDouble> &inarray,
252 Array<OneD, NekDouble> &outarray, Array<OneD, NekDouble> &wsp) override;
253
254 virtual void v_NormalTraceDerivFactors(
256 Array<OneD, Array<OneD, NekDouble>> &d0factors,
257 Array<OneD, Array<OneD, NekDouble>> &d1factors) override;
258};
259
260typedef std::shared_ptr<HexExp> HexExpSharedPtr;
261typedef std::vector<HexExpSharedPtr> HexExpVector;
262} // namespace LocalRegions
263} // namespace Nektar
264
265#endif // HEX_EXP_H
#define LOCAL_REGIONS_EXPORT
#define STD_REGIONS_EXPORT
Describes the specification for a Basis.
Definition: Basis.h:47
virtual void v_WeakDirectionalDerivMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1181
virtual NekDouble v_Integral(const Array< OneD, const NekDouble > &inarray) override
Integrate the physical point list inarray over region.
Definition: HexExp.cpp:103
virtual void v_GetCoords(Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2, Array< OneD, NekDouble > &coords_3) override
Definition: HexExp.cpp:647
LibUtilities::NekManager< MatrixKey, DNekScalMat, MatrixKey::opLess > m_matrixManager
Definition: HexExp.h:246
virtual void v_MassMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1151
virtual void v_LaplacianMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1158
virtual DNekMatSharedPtr v_GenMatrix(const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1301
virtual DNekMatSharedPtr v_CreateStdMatrix(const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1323
LibUtilities::NekManager< MatrixKey, DNekScalBlkMat, MatrixKey::opLess > m_staticCondMatrixManager
Definition: HexExp.h:248
virtual void v_HelmholtzMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1195
void v_DropLocStaticCondMatrix(const MatrixKey &mkey) override
Definition: HexExp.cpp:1350
virtual DNekScalMatSharedPtr v_GetLocMatrix(const MatrixKey &mkey) override
Definition: HexExp.cpp:1335
virtual void v_IProductWRTBase_SumFac(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true) override
Calculate the inner product of inarray with respect to the given basis B = base0 * base1 * base2.
Definition: HexExp.cpp:372
virtual void v_FwdTrans(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Forward transform from physical quadrature space stored in inarray and evaluate the expansion coeffic...
Definition: HexExp.cpp:299
virtual void v_IProductWRTDerivBase_SumFac(const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Calculates the inner product .
Definition: HexExp.cpp:429
virtual void v_SVVLaplacianFilter(Array< OneD, NekDouble > &array, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1271
void v_ComputeTraceNormal(const int face) override
Definition: HexExp.cpp:882
HexExp(const LibUtilities::BasisKey &Ba, const LibUtilities::BasisKey &Bb, const LibUtilities::BasisKey &Bc, const SpatialDomains::HexGeomSharedPtr &geom)
Constructor using BasisKey class for quadrature points and order definition.
Definition: HexExp.cpp:59
virtual void v_ComputeLaplacianMetric() override
Definition: HexExp.cpp:1428
virtual void v_ExtractDataToCoeffs(const NekDouble *data, const std::vector< unsigned int > &nummodes, const int mode_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType) override
Definition: HexExp.cpp:664
virtual ~HexExp() override=default
virtual void v_LaplacianMatrixOp_MatFree_Kernel(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp) override
Definition: HexExp.cpp:1355
virtual void v_PhysDeriv(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) override
Calculate the derivative of the physical points.
Definition: HexExp.cpp:144
void v_DropLocMatrix(const MatrixKey &mkey) override
Definition: HexExp.cpp:1340
virtual void v_IProductWRTDerivBase(const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Definition: HexExp.cpp:402
virtual void v_GetCoord(const Array< OneD, const NekDouble > &Lcoords, Array< OneD, NekDouble > &coords) override
Retrieves the physical coordinates of a given set of reference coordinates.
Definition: HexExp.cpp:630
virtual NekDouble v_PhysEvaluate(const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals) override
This function evaluates the expansion at a single (arbitrary) point of the domain.
Definition: HexExp.cpp:583
virtual void v_IProductWRTDirectionalDerivBase_SumFac(const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Definition: HexExp.cpp:516
virtual void v_AlignVectorToCollapsedDir(const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
Definition: HexExp.cpp:474
virtual void v_PhysDirectionalDeriv(const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &out) override
Physical derivative along a direction vector.
Definition: HexExp.cpp:257
virtual NekDouble v_StdPhysEvaluate(const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals) override
Definition: HexExp.cpp:575
virtual DNekScalBlkMatSharedPtr v_GetLocStaticCondMatrix(const MatrixKey &mkey) override
Definition: HexExp.cpp:1345
virtual void v_GetTracePhysMap(const int face, Array< OneD, int > &outarray) override
Definition: HexExp.cpp:767
virtual LibUtilities::ShapeType v_DetShapeType() const override
Return the region shape using the enum-list of ShapeType.
Definition: HexExp.cpp:659
virtual void v_ReduceOrderCoeffs(int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Definition: HexExp.cpp:1213
virtual void v_WeakDerivMatrixOp(const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1173
virtual StdRegions::StdExpansionSharedPtr v_GetStdExp(void) const override
Definition: HexExp.cpp:603
virtual void v_IProductWRTDirectionalDerivBase(const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Definition: HexExp.h:117
virtual StdRegions::StdExpansionSharedPtr v_GetLinStdExp(void) const override
Definition: HexExp.cpp:610
virtual void v_IProductWRTBase(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Calculate the inner product of inarray with respect to the elements basis.
Definition: HexExp.cpp:334
virtual void v_NormalTraceDerivFactors(Array< OneD, Array< OneD, NekDouble > > &factors, Array< OneD, Array< OneD, NekDouble > > &d0factors, Array< OneD, Array< OneD, NekDouble > > &d1factors) override
: This method gets all of the factors which are required as part of the Gradient Jump Penalty stabili...
Definition: HexExp.cpp:1470
virtual void v_MassLevelCurvatureMatrixOp(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) override
Definition: HexExp.cpp:1188
void IProductWRTDirectionalDerivBase_SumFac(const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Class representing a hexehedral element in reference space.
Definition: StdHexExp.h:48
std::vector< HexExpSharedPtr > HexExpVector
Definition: HexExp.h:261
std::shared_ptr< HexExp > HexExpSharedPtr
Definition: HexExp.h:260
std::shared_ptr< HexGeom > HexGeomSharedPtr
Definition: HexGeom.h:87
std::shared_ptr< StdExpansion > StdExpansionSharedPtr
StdRegions::ConstFactorMap factors
The above copyright notice and this permission notice shall be included.
Definition: CoupledSolver.h:2
std::shared_ptr< DNekScalMat > DNekScalMatSharedPtr
std::shared_ptr< DNekScalBlkMat > DNekScalBlkMatSharedPtr
Definition: NekTypeDefs.hpp:79
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:75
double NekDouble