Nektar++
Static Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | Friends | List of all members
Nektar::GlobalMapping::MappingTranslation Class Reference

#include <MappingTranslation.h>

Inheritance diagram for Nektar::GlobalMapping::MappingTranslation:
[legend]

Static Public Member Functions

static GLOBAL_MAPPING_EXPORT MappingSharedPtr create (const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping)
 Creates an instance of this class. More...
 
- Static Public Member Functions inherited from Nektar::GlobalMapping::Mapping
static GLOBAL_MAPPING_EXPORT MappingSharedPtr Load (const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
 Return a pointer to the mapping, creating it on first call. More...
 

Static Public Attributes

static std::string className
 Name of the class. More...
 

Protected Member Functions

 MappingTranslation (const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
 
virtual GLOBAL_MAPPING_EXPORT void v_InitObject (const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping) override
 
virtual GLOBAL_MAPPING_EXPORT void v_ContravarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_CovarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_ContravarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_CovarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_GetJacobian (Array< OneD, NekDouble > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_DotGradJacobian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_GetMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_GetInvMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_LowerIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_RaiseIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_ApplyChristoffelContravar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_ApplyChristoffelCovar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) override
 
virtual GLOBAL_MAPPING_EXPORT void v_UpdateGeomInfo () override
 
- Protected Member Functions inherited from Nektar::GlobalMapping::Mapping
GLOBAL_MAPPING_EXPORT Mapping (const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
 Constructor. More...
 
GLOBAL_MAPPING_EXPORT void EvaluateFunction (Array< OneD, MultiRegions::ExpListSharedPtr > pFields, LibUtilities::SessionReaderSharedPtr pSession, std::string pFieldName, Array< OneD, NekDouble > &pArray, const std::string &pFunctionName, NekDouble pTime=NekDouble(0))
 
GLOBAL_MAPPING_EXPORT void EvaluateTimeFunction (LibUtilities::SessionReaderSharedPtr pSession, std::string pFieldName, Array< OneD, NekDouble > &pArray, const std::string &pFunctionName, NekDouble pTime=NekDouble(0))
 
virtual GLOBAL_MAPPING_EXPORT void v_InitObject (const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping)
 
virtual GLOBAL_MAPPING_EXPORT void v_ContravarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_CovarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_ContravarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_CovarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_GetCartesianCoordinates (Array< OneD, NekDouble > &out0, Array< OneD, NekDouble > &out1, Array< OneD, NekDouble > &out2)
 
virtual GLOBAL_MAPPING_EXPORT void v_GetCoordVelocity (Array< OneD, Array< OneD, NekDouble > > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_GetJacobian (Array< OneD, NekDouble > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_DotGradJacobian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_GetMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_GetInvMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_LowerIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_RaiseIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_ApplyChristoffelContravar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_ApplyChristoffelCovar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)=0
 
virtual GLOBAL_MAPPING_EXPORT void v_Divergence (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_VelocityLaplacian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const NekDouble alpha)
 
virtual GLOBAL_MAPPING_EXPORT void v_gradgradU (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 
virtual GLOBAL_MAPPING_EXPORT void v_CurlCurlField (Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const bool generalized)
 
virtual GLOBAL_MAPPING_EXPORT void v_UpdateMapping (const NekDouble time, const Array< OneD, Array< OneD, NekDouble > > &coords=NullNekDoubleArrayOfArray, const Array< OneD, Array< OneD, NekDouble > > &coordsVel=NullNekDoubleArrayOfArray)
 
virtual GLOBAL_MAPPING_EXPORT void v_UpdateGeomInfo ()=0
 
virtual GLOBAL_MAPPING_EXPORT void v_UpdateBCs (const NekDouble time)
 

Protected Attributes

std::string m_velFuncName
 
- Protected Attributes inherited from Nektar::GlobalMapping::Mapping
LibUtilities::SessionReaderSharedPtr m_session
 Session reader. More...
 
LibUtilities::FieldIOSharedPtr m_fld
 
Array< OneD, MultiRegions::ExpListSharedPtrm_fields
 
Array< OneD, Array< OneD, NekDouble > > m_coords
 Array with the Cartesian coordinates. More...
 
Array< OneD, Array< OneD, NekDouble > > m_coordsVel
 Array with the velocity of the coordinates. More...
 
Array< OneD, Array< OneD, NekDouble > > m_GeometricInfo
 Array with metric terms of the mapping. More...
 
int m_nConvectiveFields
 Number of velocity components. More...
 
std::string m_funcName
 Name of the function containing the coordinates. More...
 
std::string m_velFuncName
 Name of the function containing the velocity of the coordinates. More...
 
bool m_constantJacobian
 Flag defining if the Jacobian is constant. More...
 
bool m_timeDependent
 Flag defining if the Mapping is time-dependent. More...
 
bool m_fromFunction
 Flag defining if the Mapping is defined by a function. More...
 
Array< OneD, Array< OneD, NekDouble > > m_wk1
 
Array< OneD, Array< OneD, NekDouble > > m_wk2
 
Array< OneD, Array< OneD, NekDouble > > m_tmp
 

Friends

class MemoryManager< MappingTranslation >
 

Additional Inherited Members

- Public Member Functions inherited from Nektar::GlobalMapping::Mapping
virtual GLOBAL_MAPPING_EXPORT ~Mapping ()
 Destructor. More...
 
GLOBAL_MAPPING_EXPORT void InitObject (const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping)
 Initialise the mapping object. More...
 
GLOBAL_MAPPING_EXPORT void ReplaceField (const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
 Replace the Expansion List used by the mapping. More...
 
GLOBAL_MAPPING_EXPORT void Output (LibUtilities::FieldMetaDataMap &fieldMetaDataMap, const std::string &outname)
 Output function called when a chk or fld file is written. More...
 
GLOBAL_MAPPING_EXPORT void ContravarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Convert a contravariant vector to the Cartesian system. More...
 
GLOBAL_MAPPING_EXPORT void CovarToCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Convert a covariant vector to the Cartesian system. More...
 
GLOBAL_MAPPING_EXPORT void ContravarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Convert a contravariant vector to the transformed system. More...
 
GLOBAL_MAPPING_EXPORT void CovarFromCartesian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Convert a covariant vector to the transformed system. More...
 
GLOBAL_MAPPING_EXPORT void GetCartesianCoordinates (Array< OneD, NekDouble > &out0, Array< OneD, NekDouble > &out1, Array< OneD, NekDouble > &out2)
 Get the Cartesian coordinates in the field. More...
 
GLOBAL_MAPPING_EXPORT void GetJacobian (Array< OneD, NekDouble > &outarray)
 Get the Jacobian of the transformation. More...
 
GLOBAL_MAPPING_EXPORT void DotGradJacobian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray)
 Calculate the dot product with the gradient of the Jacobian. More...
 
GLOBAL_MAPPING_EXPORT void GetMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray)
 Get the metric tensor \(g_{ij}\). More...
 
GLOBAL_MAPPING_EXPORT void GetInvMetricTensor (Array< OneD, Array< OneD, NekDouble > > &outarray)
 Get the inverse of metric tensor \(g^{ij}\). More...
 
GLOBAL_MAPPING_EXPORT void LowerIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Lower index of vector: \(v_{i} = g_{ij}*v^{j}\). More...
 
GLOBAL_MAPPING_EXPORT void RaiseIndex (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Raise index of vector: \(v^{i} = g^{ij}*v_{j}\). More...
 
GLOBAL_MAPPING_EXPORT void ApplyChristoffelContravar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Apply the Christoffel symbols to a contravariant vector. More...
 
GLOBAL_MAPPING_EXPORT void ApplyChristoffelCovar (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Apply the Christoffel symbols to a covariant vector. More...
 
GLOBAL_MAPPING_EXPORT void GetCoordVelocity (Array< OneD, Array< OneD, NekDouble > > &outarray)
 Obtain the velocity of the coordinates. More...
 
GLOBAL_MAPPING_EXPORT void Divergence (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray)
 Calculate the generalised divergence operator. More...
 
GLOBAL_MAPPING_EXPORT void VelocityLaplacian (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const NekDouble alpha=0.0)
 Generalised (correction to the) velocity Laplacian operator. More...
 
GLOBAL_MAPPING_EXPORT void gradgradU (const Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray)
 Second order covariant derivatives of a contravariant vector. More...
 
GLOBAL_MAPPING_EXPORT void CurlCurlField (Array< OneD, Array< OneD, NekDouble > > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray, const bool generalized)
 CurlCurl calculated on the whole field. More...
 
GLOBAL_MAPPING_EXPORT bool IsTimeDependent ()
 Get flag defining if mapping is time-dependent. More...
 
GLOBAL_MAPPING_EXPORT void SetTimeDependent (const bool value)
 Set flag defining if mapping is time-dependent. More...
 
GLOBAL_MAPPING_EXPORT bool IsFromFunction ()
 Get flag defining if mapping is defined by a function. More...
 
GLOBAL_MAPPING_EXPORT void SetFromFunction (const bool value)
 Set flag defining if mapping is defined by a function. More...
 
GLOBAL_MAPPING_EXPORT bool HasConstantJacobian ()
 Get flag defining if mapping has constant Jacobian. More...
 
GLOBAL_MAPPING_EXPORT bool IsDefined ()
 Get flag determining if the mapping was defined or is trivial. More...
 
GLOBAL_MAPPING_EXPORT void UpdateBCs (const NekDouble time)
 Update the Dirichlet Boundary Conditions when using Mappings. More...
 
GLOBAL_MAPPING_EXPORT void UpdateMapping (const NekDouble time, const Array< OneD, Array< OneD, NekDouble > > &coords=NullNekDoubleArrayOfArray, const Array< OneD, Array< OneD, NekDouble > > &coordsVel=NullNekDoubleArrayOfArray)
 Update the Mapping with new coordinates. More...
 
GLOBAL_MAPPING_EXPORT void UpdateGeomInfo ()
 Recompute the metric terms of the Mapping. More...
 
- Static Protected Attributes inherited from Nektar::GlobalMapping::Mapping
static MappingSharedPtr m_mappingPtr = MappingSharedPtr()
 
static bool m_init = false
 
static bool m_isDefined = false
 

Detailed Description

This class implements a trivial mapping defined by

\[ \bar{x} = x + c_1 \]

\[ \bar{y} = y + c_2 \]

\[ \bar{z} = z + c_3 \]

where \(c_i\) are constants, \((\bar{x},\bar{y},\bar{z})\) are the Cartesian (physical) coordinates and \((x,y,z)\) are the transformed (computational) coordinates.

Definition at line 51 of file MappingTranslation.h.

Constructor & Destructor Documentation

◆ MappingTranslation()

Nektar::GlobalMapping::MappingTranslation::MappingTranslation ( const LibUtilities::SessionReaderSharedPtr pSession,
const Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields 
)
protected

Definition at line 60 of file MappingTranslation.cpp.

63 : Mapping(pSession, pFields)
64{
65}
GLOBAL_MAPPING_EXPORT Mapping(const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
Constructor.
Definition: Mapping.cpp:59

Member Function Documentation

◆ create()

static GLOBAL_MAPPING_EXPORT MappingSharedPtr Nektar::GlobalMapping::MappingTranslation::create ( const LibUtilities::SessionReaderSharedPtr pSession,
const Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields,
const TiXmlElement *  pMapping 
)
inlinestatic

Creates an instance of this class.

Definition at line 58 of file MappingTranslation.h.

62 {
65 pFields);
66 p->InitObject(pFields, pMapping);
67 return p;
68 }
static std::shared_ptr< DataType > AllocateSharedPtr(const Args &...args)
Allocate a shared pointer from the memory pool.
GLOBAL_MAPPING_EXPORT typedef std::shared_ptr< Mapping > MappingSharedPtr
A shared pointer to a Mapping object.
Definition: Mapping.h:53

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::GlobalMapping::MappingSharedPtr, and CellMLToNektar.cellml_metadata::p.

◆ v_ApplyChristoffelContravar()

void Nektar::GlobalMapping::MappingTranslation::v_ApplyChristoffelContravar ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 243 of file MappingTranslation.cpp.

246{
247 boost::ignore_unused(inarray);
248
249 int physTot = m_fields[0]->GetTotPoints();
250 int nvel = m_nConvectiveFields;
251
252 for (int i = 0; i < nvel; i++)
253 {
254 for (int j = 0; j < nvel; j++)
255 {
256 outarray[i * nvel + j] = Array<OneD, NekDouble>(physTot, 0.0);
257 }
258 }
259}
int m_nConvectiveFields
Number of velocity components.
Definition: Mapping.h:414
Array< OneD, MultiRegions::ExpListSharedPtr > m_fields
Definition: Mapping.h:406

References Nektar::GlobalMapping::Mapping::m_fields, and Nektar::GlobalMapping::Mapping::m_nConvectiveFields.

◆ v_ApplyChristoffelCovar()

void Nektar::GlobalMapping::MappingTranslation::v_ApplyChristoffelCovar ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 261 of file MappingTranslation.cpp.

264{
265 boost::ignore_unused(inarray);
266
267 int physTot = m_fields[0]->GetTotPoints();
268 int nvel = m_nConvectiveFields;
269
270 for (int i = 0; i < nvel; i++)
271 {
272 for (int j = 0; j < nvel; j++)
273 {
274 outarray[i * nvel + j] = Array<OneD, NekDouble>(physTot, 0.0);
275 }
276 }
277}

References Nektar::GlobalMapping::Mapping::m_fields, and Nektar::GlobalMapping::Mapping::m_nConvectiveFields.

◆ v_ContravarFromCartesian()

void Nektar::GlobalMapping::MappingTranslation::v_ContravarFromCartesian ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 130 of file MappingTranslation.cpp.

133{
134 int physTot = m_fields[0]->GetTotPoints();
135
136 for (int i = 0; i < m_nConvectiveFields; ++i)
137 {
138 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
139 }
140}
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1191

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_ContravarToCartesian()

void Nektar::GlobalMapping::MappingTranslation::v_ContravarToCartesian ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 106 of file MappingTranslation.cpp.

109{
110 int physTot = m_fields[0]->GetTotPoints();
111
112 for (int i = 0; i < m_nConvectiveFields; ++i)
113 {
114 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
115 }
116}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_CovarFromCartesian()

void Nektar::GlobalMapping::MappingTranslation::v_CovarFromCartesian ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 142 of file MappingTranslation.cpp.

145{
146 int physTot = m_fields[0]->GetTotPoints();
147
148 for (int i = 0; i < m_nConvectiveFields; ++i)
149 {
150 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
151 }
152}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_CovarToCartesian()

void Nektar::GlobalMapping::MappingTranslation::v_CovarToCartesian ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 118 of file MappingTranslation.cpp.

121{
122 int physTot = m_fields[0]->GetTotPoints();
123
124 for (int i = 0; i < m_nConvectiveFields; ++i)
125 {
126 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
127 }
128}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_DotGradJacobian()

void Nektar::GlobalMapping::MappingTranslation::v_DotGradJacobian ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
overrideprotectedvirtual

Reimplemented from Nektar::GlobalMapping::Mapping.

Definition at line 160 of file MappingTranslation.cpp.

163{
164 boost::ignore_unused(inarray);
165
166 int physTot = m_fields[0]->GetTotPoints();
167
168 Vmath::Zero(physTot, outarray, 1);
169}
void Zero(int n, T *x, const int incx)
Zero vector.
Definition: Vmath.cpp:487

References Nektar::GlobalMapping::Mapping::m_fields, and Vmath::Zero().

◆ v_GetInvMetricTensor()

void Nektar::GlobalMapping::MappingTranslation::v_GetInvMetricTensor ( Array< OneD, Array< OneD, NekDouble > > &  outarray)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 189 of file MappingTranslation.cpp.

191{
192 int physTot = m_fields[0]->GetTotPoints();
193 int nvel = m_nConvectiveFields;
194
195 for (int i = 0; i < nvel * nvel; i++)
196 {
197 outarray[i] = Array<OneD, NekDouble>(physTot, 0.0);
198 }
199 // Fill diagonal with 1.0
200 for (int i = 0; i < nvel; i++)
201 {
202 Vmath::Sadd(physTot, 1.0, outarray[i + nvel * i], 1,
203 outarray[i + nvel * i], 1);
204 }
205}
void Sadd(int n, const T alpha, const T *x, const int incx, T *y, const int incy)
Add scalar y = alpha + x.
Definition: Vmath.cpp:379

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Sadd().

◆ v_GetJacobian()

void Nektar::GlobalMapping::MappingTranslation::v_GetJacobian ( Array< OneD, NekDouble > &  outarray)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 154 of file MappingTranslation.cpp.

155{
156 int physTot = m_fields[0]->GetTotPoints();
157 Vmath::Fill(physTot, 1.0, outarray, 1);
158}
void Fill(int n, const T alpha, T *x, const int incx)
Fill a vector with a constant value.
Definition: Vmath.cpp:43

References Vmath::Fill(), and Nektar::GlobalMapping::Mapping::m_fields.

◆ v_GetMetricTensor()

void Nektar::GlobalMapping::MappingTranslation::v_GetMetricTensor ( Array< OneD, Array< OneD, NekDouble > > &  outarray)
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 171 of file MappingTranslation.cpp.

173{
174 int physTot = m_fields[0]->GetTotPoints();
175 int nvel = m_nConvectiveFields;
176
177 for (int i = 0; i < nvel * nvel; i++)
178 {
179 outarray[i] = Array<OneD, NekDouble>(physTot, 0.0);
180 }
181 // Fill diagonal with 1.0
182 for (int i = 0; i < nvel; i++)
183 {
184 Vmath::Sadd(physTot, 1.0, outarray[i + nvel * i], 1,
185 outarray[i + nvel * i], 1);
186 }
187}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Sadd().

◆ v_InitObject()

void Nektar::GlobalMapping::MappingTranslation::v_InitObject ( const Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields,
const TiXmlElement *  pMapping 
)
overrideprotectedvirtual

This function initialises the Mapping object. It computes the coordinates and velocity coordinates, initialises the workspace variables, and calls UpdateGeomInfo, which will perform the calculations specific for each type of Mapping.

Parameters
pFieldsExpList array used in the mapping
pMappingxml element describing the mapping

Reimplemented from Nektar::GlobalMapping::Mapping.

Definition at line 70 of file MappingTranslation.cpp.

73{
74 m_constantJacobian = true;
75 // When there is no Mapping object defined, use the identity
76 // transformation as a default
77 if (m_session->DefinesElement("Nektar/Mapping"))
78 {
79 Mapping::v_InitObject(pFields, pMapping);
80 }
81 else
82 {
83 int phystot = pFields[0]->GetTotPoints();
84
85 m_timeDependent = false;
86
87 m_coords = Array<OneD, Array<OneD, NekDouble>>(3);
88 m_coordsVel = Array<OneD, Array<OneD, NekDouble>>(3);
89 for (int i = 0; i < 3; i++)
90 {
91 m_coords[i] = Array<OneD, NekDouble>(phystot);
92 m_coordsVel[i] = Array<OneD, NekDouble>(phystot, 0.0);
93 }
94
95 m_fields[0]->GetCoords(m_coords[0], m_coords[1], m_coords[2]);
96
97 // Initialise workspace variables
98 m_tmp = Array<OneD, Array<OneD, NekDouble>>(m_nConvectiveFields);
99 for (int i = 0; i < m_nConvectiveFields; i++)
100 {
101 m_tmp[i] = Array<OneD, NekDouble>(phystot, 0.0);
102 }
103 }
104}
LibUtilities::SessionReaderSharedPtr m_session
Session reader.
Definition: Mapping.h:402
Array< OneD, Array< OneD, NekDouble > > m_coords
Array with the Cartesian coordinates.
Definition: Mapping.h:408
Array< OneD, Array< OneD, NekDouble > > m_coordsVel
Array with the velocity of the coordinates.
Definition: Mapping.h:410
virtual GLOBAL_MAPPING_EXPORT void v_InitObject(const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping)
Definition: Mapping.cpp:101
Array< OneD, Array< OneD, NekDouble > > m_tmp
Definition: Mapping.h:437
bool m_constantJacobian
Flag defining if the Jacobian is constant.
Definition: Mapping.h:423
bool m_timeDependent
Flag defining if the Mapping is time-dependent.
Definition: Mapping.h:425

References Nektar::GlobalMapping::Mapping::m_constantJacobian, Nektar::GlobalMapping::Mapping::m_coords, Nektar::GlobalMapping::Mapping::m_coordsVel, Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, Nektar::GlobalMapping::Mapping::m_session, Nektar::GlobalMapping::Mapping::m_timeDependent, Nektar::GlobalMapping::Mapping::m_tmp, and Nektar::GlobalMapping::Mapping::v_InitObject().

◆ v_LowerIndex()

void Nektar::GlobalMapping::MappingTranslation::v_LowerIndex ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Reimplemented from Nektar::GlobalMapping::Mapping.

Definition at line 225 of file MappingTranslation.cpp.

228{
229 int physTot = m_fields[0]->GetTotPoints();
230 int nvel = m_nConvectiveFields;
231
232 for (int i = 0; i < nvel; i++)
233 {
234 outarray[i] = Array<OneD, NekDouble>(physTot, 0.0);
235 }
236 // Copy
237 for (int i = 0; i < nvel; i++)
238 {
239 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
240 }
241}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_RaiseIndex()

void Nektar::GlobalMapping::MappingTranslation::v_RaiseIndex ( const Array< OneD, Array< OneD, NekDouble > > &  inarray,
Array< OneD, Array< OneD, NekDouble > > &  outarray 
)
overrideprotectedvirtual

Reimplemented from Nektar::GlobalMapping::Mapping.

Definition at line 207 of file MappingTranslation.cpp.

210{
211 int physTot = m_fields[0]->GetTotPoints();
212 int nvel = m_nConvectiveFields;
213
214 for (int i = 0; i < nvel; i++)
215 {
216 outarray[i] = Array<OneD, NekDouble>(physTot, 0.0);
217 }
218 // Copy
219 for (int i = 0; i < nvel; i++)
220 {
221 Vmath::Vcopy(physTot, inarray[i], 1, outarray[i], 1);
222 }
223}

References Nektar::GlobalMapping::Mapping::m_fields, Nektar::GlobalMapping::Mapping::m_nConvectiveFields, and Vmath::Vcopy().

◆ v_UpdateGeomInfo()

void Nektar::GlobalMapping::MappingTranslation::v_UpdateGeomInfo ( )
overrideprotectedvirtual

Implements Nektar::GlobalMapping::Mapping.

Definition at line 279 of file MappingTranslation.cpp.

280{
281}

Friends And Related Function Documentation

◆ MemoryManager< MappingTranslation >

friend class MemoryManager< MappingTranslation >
friend

Definition at line 1 of file MappingTranslation.h.

Member Data Documentation

◆ className

std::string Nektar::GlobalMapping::MappingTranslation::className
static
Initial value:
=
"Translation mapping (X_i = x_i + constant)")
static GLOBAL_MAPPING_EXPORT MappingSharedPtr create(const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, const TiXmlElement *pMapping)
Creates an instance of this class.
tKey RegisterCreatorFunction(tKey idKey, CreatorFunction classCreator, std::string pDesc="")
Register a class with the factory.
Definition: NekFactory.hpp:198
MappingFactory & GetMappingFactory()
Declaration of the mapping factory singleton.
Definition: Mapping.cpp:53

Name of the class.

Definition at line 71 of file MappingTranslation.h.

◆ m_velFuncName

std::string Nektar::GlobalMapping::MappingTranslation::m_velFuncName
protected

Definition at line 75 of file MappingTranslation.h.