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Nektar::MappingExtrapolate Class Reference

#include <MappingExtrapolate.h>

Inheritance diagram for Nektar::MappingExtrapolate:
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Public Member Functions

virtual void v_CorrectPressureBCs (const Array< OneD, NekDouble > &pressure)
 
virtual void v_CalcNeumannPressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &fields, const Array< OneD, const Array< OneD, NekDouble > > &N, NekDouble kinvis)
 
 MappingExtrapolate (const LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields, MultiRegions::ExpListSharedPtr pPressure, const Array< OneD, int > pVel, const SolverUtils::AdvectionSharedPtr advObject)
 
virtual ~MappingExtrapolate ()
 
- Public Member Functions inherited from Nektar::StandardExtrapolate
 StandardExtrapolate (const LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields, MultiRegions::ExpListSharedPtr pPressure, const Array< OneD, int > pVel, const SolverUtils::AdvectionSharedPtr advObject)
 
virtual ~StandardExtrapolate ()
 
- Public Member Functions inherited from Nektar::Extrapolate
 Extrapolate (const LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields, MultiRegions::ExpListSharedPtr pPressure, const Array< OneD, int > pVel, const SolverUtils::AdvectionSharedPtr advObject)
 
virtual ~Extrapolate ()
 
void GenerateHOPBCMap ()
 
void SubSteppingTimeIntegration (const int intMethod, const LibUtilities::TimeIntegrationWrapperSharedPtr &IntegrationScheme)
 
void SubStepSaveFields (const int nstep)
 
void SubStepSetPressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &inarray, const NekDouble Aii_DT, NekDouble kinvis)
 
void SubStepAdvance (const LibUtilities::TimeIntegrationSolutionSharedPtr &integrationSoln, const int nstep, NekDouble time)
 
void MountHOPBCs (int HBCdata, NekDouble kinvis, Array< OneD, NekDouble > &Q, Array< OneD, const NekDouble > &Advection)
 
void EvaluatePressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &fields, const Array< OneD, const Array< OneD, NekDouble > > &N, NekDouble kinvis)
 
void CalcExplicitDuDt (const Array< OneD, const Array< OneD, NekDouble > > &fields)
 
void ExtrapolatePressureHBCs (void)
 
void CopyPressureHBCsToPbndExp (void)
 
Array< OneD, NekDouble > GetMaxStdVelocity (const Array< OneD, Array< OneD, NekDouble > > inarray)
 
void CorrectPressureBCs (const Array< OneD, NekDouble > &pressure)
 
void IProductNormVelocityOnHBC (const Array< OneD, const Array< OneD, NekDouble > > &Vel, Array< OneD, NekDouble > &IprodVn)
 
void IProductNormVelocityBCOnHBC (Array< OneD, NekDouble > &IprodVn)
 
LibUtilities::TimeIntegrationMethod GetSubStepIntegrationMethod (void)
 
void ExtrapolateArray (Array< OneD, Array< OneD, NekDouble > > &oldarrays, Array< OneD, NekDouble > &newarray, Array< OneD, NekDouble > &outarray)
 

Static Public Member Functions

static ExtrapolateSharedPtr create (const LibUtilities::SessionReaderSharedPtr &pSession, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, MultiRegions::ExpListSharedPtr &pPressure, const Array< OneD, int > &pVel, const SolverUtils::AdvectionSharedPtr &advObject)
 Creates an instance of this class. More...
 
- Static Public Member Functions inherited from Nektar::StandardExtrapolate
static ExtrapolateSharedPtr create (const LibUtilities::SessionReaderSharedPtr &pSession, Array< OneD, MultiRegions::ExpListSharedPtr > &pFields, MultiRegions::ExpListSharedPtr &pPressure, const Array< OneD, int > &pVel, const SolverUtils::AdvectionSharedPtr &advObject)
 Creates an instance of this class. More...
 

Static Public Attributes

static std::string className
 Name of class. More...
 
- Static Public Attributes inherited from Nektar::StandardExtrapolate
static std::string className
 Name of class. More...
 

Protected Attributes

GlobalMapping::MappingSharedPtr m_mapping
 
Array< OneD, NekDouble > m_bcCorrection
 
bool m_implicitPressure
 
bool m_implicitViscous
 
NekDouble m_pressureRelaxation
 
- Protected Attributes inherited from Nektar::Extrapolate
LibUtilities::SessionReaderSharedPtr m_session
 
LibUtilities::CommSharedPtr m_comm
 
Array< OneD,
MultiRegions::ExpListSharedPtr > 		m_fields
 
MultiRegions::ExpListSharedPtr m_pressure
 Pointer to field holding pressure field. More...
 
Array< OneD, int > m_velocity
 int which identifies which components of m_fields contains the velocity (u,v,w); More...
 
SolverUtils::AdvectionSharedPtr m_advObject
 
Array< OneD, Array< OneD,
NekDouble > > 		m_previousVelFields
 
int m_curl_dim
 Curl-curl dimensionality. More...
 
int m_bnd_dim
 bounday dimensionality More...
 
Array< OneD, const
SpatialDomains::BoundaryConditionShPtr > 		m_PBndConds
 pressure boundary conditions container More...
 
Array< OneD,
MultiRegions::ExpListSharedPtr > 		m_PBndExp
 pressure boundary conditions expansion container More...
 
int m_pressureCalls
 number of times the high-order pressure BCs have been called More...
 
int m_pressureBCsMaxPts
 Maximum points used in pressure BC evaluation. More...
 
int m_pressureBCsElmtMaxPts
 Maximum points used in Element adjacent to pressure BC evaluation. More...
 
int m_intSteps
 Maximum points used in pressure BC evaluation. More...
 
NekDouble m_timestep
 
bool m_SingleMode
 Flag to determine if single homogeneous mode is used. More...
 
bool m_HalfMode
 Flag to determine if half homogeneous mode is used. More...
 
bool m_MultipleModes
 Flag to determine if use multiple homogenenous modes are used. More...
 
NekDouble m_LhomZ
 physical length in Z direction (if homogeneous) More...
 
int m_npointsX
 number of points in X direction (if homogeneous) More...
 
int m_npointsY
 number of points in Y direction (if homogeneous) More...
 
int m_npointsZ
 number of points in Z direction (if homogeneous) More...
 
Array< OneD, int > m_pressureBCtoElmtID
 Id of element to which pressure boundary condition belongs. More...
 
Array< OneD, int > m_pressureBCtoTraceID
 Id of edge (2D) or face (3D) to which pressure boundary condition belongs. More...
 
Array< OneD, Array< OneD,
NekDouble > > 		m_pressureHBCs
 Storage for current and previous levels of high order pressure boundary conditions. More...
 
Array< OneD, Array< OneD,
NekDouble > > 		m_acceleration
 Storage for current and previous levels of the acceleration term. More...
 
Array< OneD, HBCInfo > m_HBCdata
 data structure to old all the information regarding High order pressure BCs More...
 
Array< OneD, NekDouble > m_wavenumber
 wave number 2 pi k /Lz More...
 
Array< OneD, NekDouble > m_negWavenumberSq
 minus Square of wavenumber More...
 
Array< OneD, Array< OneD,
Array< OneD, NekDouble > > > 		m_outflowVel
 Storage for current and previous velocity fields at the otuflow for high order outflow BCs. More...
 
Array< OneD, Array< OneD,
NekDouble > > 		m_traceNormals
 
Array< OneD, Array< OneD,
Array< OneD, NekDouble > > > 		m_PhyoutfVel
 Storage for current and previous velocity fields in physical space at the otuflow for high order outflow BCs. More...
 
Array< OneD, NekDouble > m_nonlinearterm_phys
 (if homogeneous) More...
 
Array< OneD, NekDouble > m_nonlinearterm_coeffs
 (if homogeneous) More...
 
Array< OneD, unsigned int > m_expsize_per_plane
 (if homogeneous) More...
 
Array< OneD, NekDouble > m_PBndCoeffs
 (if homogeneous) More...
 
Array< OneD, Array< OneD,
NekDouble > > 		m_UBndCoeffs
 (if homogeneous) More...
 
int m_totexps_per_plane
 (if homogeneous) More...
 

Additional Inherited Members

- Protected Member Functions inherited from Nektar::StandardExtrapolate
virtual void v_EvaluatePressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &fields, const Array< OneD, const Array< OneD, NekDouble > > &N, NekDouble kinvis)
 
virtual void v_SubSteppingTimeIntegration (int intMethod, const LibUtilities::TimeIntegrationWrapperSharedPtr &IntegrationScheme)
 
virtual void v_SubStepSaveFields (int nstep)
 
virtual void v_SubStepSetPressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &inarray, NekDouble Aii_DT, NekDouble kinvis)
 
virtual void v_SubStepAdvance (const LibUtilities::TimeIntegrationSolutionSharedPtr &integrationSoln, int nstep, NekDouble time)
 
virtual void v_MountHOPBCs (int HBCdata, NekDouble kinvis, Array< OneD, NekDouble > &Q, Array< OneD, const NekDouble > &Advection)
 
- Protected Member Functions inherited from Nektar::Extrapolate
virtual
LibUtilities::TimeIntegrationMethod 		v_GetSubStepIntegrationMethod (void)
 
void CalcNeumannPressureBCs (const Array< OneD, const Array< OneD, NekDouble > > &fields, const Array< OneD, const Array< OneD, NekDouble > > &N, NekDouble kinvis)
 
void CalcOutflowBCs (const Array< OneD, const Array< OneD, NekDouble > > &fields, NekDouble kinvis)
 
void RollOver (Array< OneD, Array< OneD, NekDouble > > &input)
 
void CurlCurl (Array< OneD, Array< OneD, const NekDouble > > &Vel, Array< OneD, Array< OneD, NekDouble > > &Q, const int j)
 
- Static Protected Attributes inherited from Nektar::Extrapolate
static NekDouble StifflyStable_Betaq_Coeffs [3][3]
 total number of expansion for each plane (if homogeneous) More...
 
static NekDouble StifflyStable_Alpha_Coeffs [3][3]
 
static NekDouble StifflyStable_Gamma0_Coeffs [3]
 

Detailed Description

Definition at line 52 of file MappingExtrapolate.h.

Constructor & Destructor Documentation

Nektar::MappingExtrapolate::MappingExtrapolate ( const LibUtilities::SessionReaderSharedPtr  pSession,
Array< OneD, MultiRegions::ExpListSharedPtr >  pFields,
MultiRegions::ExpListSharedPtr  pPressure,
const Array< OneD, int >  pVel,
const SolverUtils::AdvectionSharedPtr  advObject 
)

Definition at line 49 of file MappingExtrapolate.cpp.

References Nektar::GlobalMapping::Mapping::Load(), Nektar::Extrapolate::m_fields, m_implicitPressure, m_implicitViscous, m_mapping, m_pressureRelaxation, and Nektar::Extrapolate::m_session.

55  : StandardExtrapolate(pSession,pFields,pPressure,pVel,advObject)
56  {
57  m_mapping = GlobalMapping::Mapping::Load(m_session, m_fields);
58 
59  // Load solve parameters related to the mapping
60  // Flags determining if pressure/viscous terms should be treated implicitly
61  m_session->MatchSolverInfo("MappingImplicitPressure","True",m_implicitPressure,false);
62  m_session->MatchSolverInfo("MappingImplicitViscous","True",m_implicitViscous,false);
63 
64  // Relaxation parameter for pressure system
65  m_session->LoadParameter("MappingPressureRelaxation",m_pressureRelaxation,1.0);
66  }
Nektar::Extrapolate::m_session
LibUtilities::SessionReaderSharedPtr m_session
Definition: Extrapolate.h:208
Nektar::StandardExtrapolate::StandardExtrapolate
StandardExtrapolate(const LibUtilities::SessionReaderSharedPtr pSession, Array< OneD, MultiRegions::ExpListSharedPtr > pFields, MultiRegions::ExpListSharedPtr pPressure, const Array< OneD, int > pVel, const SolverUtils::AdvectionSharedPtr advObject)
Definition: StandardExtrapolate.cpp:49
Nektar::Extrapolate::m_fields
Array< OneD, MultiRegions::ExpListSharedPtr > m_fields
Definition: Extrapolate.h:212
Nektar::MappingExtrapolate::m_mapping
GlobalMapping::MappingSharedPtr m_mapping
Definition: MappingExtrapolate.h:90
Nektar::GlobalMapping::Mapping::Load
static GLOBAL_MAPPING_EXPORT MappingSharedPtr Load(const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, MultiRegions::ExpListSharedPtr > &pFields)
Return a pointer to the mapping, creating it on first call.
Definition: Mapping.cpp:264
Nektar::MappingExtrapolate::~MappingExtrapolate ( )
virtual

Definition at line 68 of file MappingExtrapolate.cpp.

69  {
70  }

Member Function Documentation

static ExtrapolateSharedPtr Nektar::MappingExtrapolate::create ( const LibUtilities::SessionReaderSharedPtr &  pSession,
Array< OneD, MultiRegions::ExpListSharedPtr > &  pFields,
MultiRegions::ExpListSharedPtr &  pPressure,
const Array< OneD, int > &  pVel,
const SolverUtils::AdvectionSharedPtr &  advObject 
)
inlinestatic

Creates an instance of this class.

Definition at line 57 of file MappingExtrapolate.h.

References Nektar::MemoryManager< DataType >::AllocateSharedPtr().

63  {
64  ExtrapolateSharedPtr p = MemoryManager<MappingExtrapolate>
65  ::AllocateSharedPtr(pSession,pFields,pPressure,pVel,advObject);
66  return p;
67  }
Nektar::MemoryManager::AllocateSharedPtr
static boost::shared_ptr< DataType > AllocateSharedPtr()
Allocate a shared pointer from the memory pool.
Definition: NekMemoryManager.hpp:235
Nektar::ExtrapolateSharedPtr
boost::shared_ptr< Extrapolate > ExtrapolateSharedPtr
Definition: Extrapolate.h:72
void Nektar::MappingExtrapolate::v_CalcNeumannPressureBCs ( const Array< OneD, const Array< OneD, NekDouble > > &  fields,
const Array< OneD, const Array< OneD, NekDouble > > &  N,
NekDouble  kinvis 
)
virtual

Unified routine for calculation high-oder terms

Casting the boundary expansion to the specific case

Picking up the element where the HOPBc is located

Assigning

Casting the boundary expansion to the specific case

Picking up the element where the HOPBc is located

Assigning

Calculating the curl-curl and storing it in Q

Reimplemented from Nektar::Extrapolate.

Definition at line 229 of file MappingExtrapolate.cpp.

References ASSERTL0, Nektar::MultiRegions::DirCartesianMap, Nektar::MultiRegions::e2D, Nektar::MultiRegions::e3D, Nektar::MultiRegions::e3DH1D, Nektar::MultiRegions::e3DH2D, m_bcCorrection, Nektar::Extrapolate::m_bnd_dim, Nektar::Extrapolate::m_fields, Nektar::Extrapolate::m_HBCdata, m_implicitPressure, m_implicitViscous, m_mapping, Nektar::Extrapolate::m_PBndExp, Nektar::Extrapolate::m_pressure, Nektar::Extrapolate::m_pressureBCsElmtMaxPts, Nektar::Extrapolate::m_pressureBCsMaxPts, Nektar::Extrapolate::m_pressureHBCs, m_pressureRelaxation, Nektar::Extrapolate::MountHOPBCs(), Vmath::Smul(), Nektar::Extrapolate::v_CalcNeumannPressureBCs(), Vmath::Vadd(), Vmath::Vcopy(), Vmath::Vdiv(), and Vmath::Vmul().

233  {
234  if (m_mapping->HasConstantJacobian() && !m_implicitViscous)
235  {
236  Extrapolate::v_CalcNeumannPressureBCs( fields, N, kinvis);
237  }
238  else
239  {
240  int physTot = m_fields[0]->GetTotPoints();
241  int nvel = m_fields.num_elements()-1;
242 
243  Array<OneD, NekDouble> Pvals;
244  StdRegions::StdExpansionSharedPtr Pbc;
245  StdRegions::StdExpansionSharedPtr elmt;
246 
247  Array<OneD, Array<OneD, const NekDouble> > Velocity(m_bnd_dim);
248  Array<OneD, Array<OneD, const NekDouble> > Advection(m_bnd_dim);
249  // Get transformation Jacobian
250  Array<OneD, NekDouble> Jac(physTot,0.0);
251  m_mapping->GetJacobian(Jac);
252  // Declare variables
253  Array<OneD, Array<OneD, NekDouble> > BndValues(m_bnd_dim);
254  Array<OneD, Array<OneD, NekDouble> > Q(m_bnd_dim);
255  Array<OneD, Array<OneD, NekDouble> > Q_field(nvel);
256  Array<OneD, Array<OneD, NekDouble> > fields_new(nvel);
257  Array<OneD, Array<OneD, NekDouble> > N_new(m_bnd_dim);
258  // Temporary variables
259  Array<OneD, NekDouble> tmp(physTot,0.0);
260  Array<OneD, NekDouble> tmp2(physTot,0.0);
261  for(int i = 0; i < m_bnd_dim; i++)
262  {
263  BndValues[i] = Array<OneD, NekDouble> (m_pressureBCsMaxPts,0.0);
264  Q[i] = Array<OneD, NekDouble> (m_pressureBCsElmtMaxPts,0.0);
265  N_new[i] = Array<OneD, NekDouble> (physTot,0.0);
266  }
267  for(int i = 0; i < nvel; i++)
268  {
269  Q_field[i] = Array<OneD, NekDouble> (physTot,0.0);
270  fields_new[i] = Array<OneD, NekDouble> (physTot,0.0);
271  }
272 
273  // Multiply convective terms by Jacobian
274  for(int i = 0; i < m_bnd_dim; i++)
275  {
276  if (m_fields[0]->GetWaveSpace())
277  {
278  m_fields[0]->HomogeneousBwdTrans(N[i],N_new[i]);
279  }
280  else
281  {
282  Vmath::Vcopy(physTot, N[i], 1, N_new[i], 1);
283  }
284  Vmath::Vmul(physTot, Jac, 1, N_new[i], 1, N_new[i], 1);
285  if (m_fields[0]->GetWaveSpace())
286  {
287  m_fields[0]->HomogeneousFwdTrans(N_new[i],N_new[i]);
288  }
289  }
290 
291  // Get velocity in physical space
292  for(int i = 0; i < nvel; i++)
293  {
294  if (m_fields[0]->GetWaveSpace())
295  {
296  m_fields[0]->HomogeneousBwdTrans(fields[i],fields_new[i]);
297  }
298  else
299  {
300  Vmath::Vcopy(physTot, fields[i], 1, fields_new[i], 1);
301  }
302  }
303 
304  // Calculate appropriate form of the CurlCurl operator
305  m_mapping->CurlCurlField(fields_new, Q_field, m_implicitViscous);
306 
307  // If viscous terms are treated explicitly,
308  // add grad(U/J \dot grad J) to CurlCurl
309  if ( !m_implicitViscous)
310  {
311  m_mapping->DotGradJacobian(fields_new, tmp);
312  Vmath::Vdiv(physTot, tmp, 1, Jac, 1, tmp, 1);
313 
314  bool wavespace = m_fields[0]->GetWaveSpace();
315  m_fields[0]->SetWaveSpace(false);
316  for(int i = 0; i < m_bnd_dim; i++)
317  {
318  m_fields[0]->PhysDeriv(MultiRegions::DirCartesianMap[i],
319  tmp, tmp2);
320  Vmath::Vadd(physTot, Q_field[i], 1, tmp2, 1, Q_field[i], 1);
321  }
322  m_fields[0]->SetWaveSpace(wavespace);
323  }
324 
325  // Multiply by Jacobian and convert to wavespace (if necessary)
326  for(int i = 0; i < m_bnd_dim; i++)
327  {
328  Vmath::Vmul(physTot, Jac, 1, fields_new[i], 1, fields_new[i], 1);
329  Vmath::Vmul(physTot, Jac, 1, Q_field[i] , 1, Q_field[i] , 1);
330  if (m_fields[0]->GetWaveSpace())
331  {
332  m_fields[0]->HomogeneousFwdTrans(fields_new[i],fields_new[i]);
333  m_fields[0]->HomogeneousFwdTrans(Q_field[i],Q_field[i]);
334  }
335  }
336 
337  for(int j = 0 ; j < m_HBCdata.num_elements() ; j++)
338  {
339  /// Casting the boundary expansion to the specific case
340  Pbc = boost::dynamic_pointer_cast<StdRegions::StdExpansion>
341  (m_PBndExp[m_HBCdata[j].m_bndryID]
342  ->GetExp(m_HBCdata[j].m_bndElmtID));
343 
344  /// Picking up the element where the HOPBc is located
345  elmt = m_pressure->GetExp(m_HBCdata[j].m_globalElmtID);
346 
347  /// Assigning
348  for(int i = 0; i < m_bnd_dim; i++)
349  {
350  Velocity[i] = fields_new[i] + m_HBCdata[j].m_physOffset;
351  Advection[i] = N_new[i] + m_HBCdata[j].m_physOffset;
352  Q[i] = Q_field[i] + m_HBCdata[j].m_physOffset;
353  }
354 
355  // Mounting advection component into the high-order condition
356  for(int i = 0; i < m_bnd_dim; i++)
357  {
358  MountHOPBCs(m_HBCdata[j].m_ptsInElmt,kinvis,Q[i],Advection[i]);
359  }
360 
361  Pvals = m_pressureHBCs[0] + m_HBCdata[j].m_coeffOffset;
362 
363  // Getting values on the edge and filling the pressure boundary
364  // expansion and the acceleration term. Multiplication by the
365  // normal is required
366  switch(m_pressure->GetExpType())
367  {
368  case MultiRegions::e2D:
369  case MultiRegions::e3DH1D:
370  {
371  elmt->GetEdgePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
372  Q[0], BndValues[0]);
373  elmt->GetEdgePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
374  Q[1], BndValues[1]);
375 
376  // InnerProduct
377  Pbc->NormVectorIProductWRTBase(BndValues[0], BndValues[1],
378  Pvals);
379  }
380  break;
381  case MultiRegions::e3DH2D:
382  {
383  if(m_HBCdata[j].m_elmtTraceID == 0)
384  {
385  (m_PBndExp[m_HBCdata[j].m_bndryID]->UpdateCoeffs()
386  + m_PBndExp[m_HBCdata[j].m_bndryID]
387  ->GetCoeff_Offset(
388  m_HBCdata[j].m_bndElmtID))[0]
389  = -1.0*Q[0][0];
390  }
391  else if (m_HBCdata[j].m_elmtTraceID == 1)
392  {
393  (m_PBndExp[m_HBCdata[j].m_bndryID]->UpdateCoeffs()
394  + m_PBndExp[m_HBCdata[j].m_bndryID]
395  ->GetCoeff_Offset(
396  m_HBCdata[j].m_bndElmtID))[0]
397  = Q[0][m_HBCdata[j].m_ptsInElmt-1];
398  }
399  else
400  {
401  ASSERTL0(false,
402  "In the 3D homogeneous 2D approach BCs edge "
403  "ID can be just 0 or 1 ");
404  }
405  }
406  break;
407  case MultiRegions::e3D:
408  {
409  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
410  Q[0], BndValues[0]);
411  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
412  Q[1], BndValues[1]);
413  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
414  Q[2], BndValues[2]);
415  Pbc->NormVectorIProductWRTBase(BndValues[0], BndValues[1],
416  BndValues[2], Pvals);
417  }
418  break;
419  default:
420  ASSERTL0(0,"Dimension not supported");
421  break;
422  }
423  }
424  }
425  // If pressure terms are treated implicitly, we need to multiply
426  // by the relaxation parameter, and zero the correction term
427  if (m_implicitPressure)
428  {
429  Vmath::Smul(m_pressureHBCs[0].num_elements(), m_pressureRelaxation,
430  m_pressureHBCs[0], 1,
431  m_pressureHBCs[0], 1);
432  }
433  m_bcCorrection = Array<OneD, NekDouble> (m_pressureHBCs[0].num_elements(), 0.0);
434  }
ASSERTL0
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:161
Nektar::Extrapolate::m_pressure
MultiRegions::ExpListSharedPtr m_pressure
Pointer to field holding pressure field.
Definition: Extrapolate.h:215
Nektar::Extrapolate::m_pressureBCsMaxPts
int m_pressureBCsMaxPts
Maximum points used in pressure BC evaluation.
Definition: Extrapolate.h:241
Nektar::Extrapolate::m_PBndExp
Array< OneD, MultiRegions::ExpListSharedPtr > m_PBndExp
pressure boundary conditions expansion container
Definition: Extrapolate.h:235
Nektar::Extrapolate::m_pressureBCsElmtMaxPts
int m_pressureBCsElmtMaxPts
Maximum points used in Element adjacent to pressure BC evaluation.
Definition: Extrapolate.h:244
Vmath::Vdiv
void Vdiv(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x/y.
Definition: Vmath.cpp:227
Nektar::Extrapolate::m_fields
Array< OneD, MultiRegions::ExpListSharedPtr > m_fields
Definition: Extrapolate.h:212
Nektar::MappingExtrapolate::m_bcCorrection
Array< OneD, NekDouble > m_bcCorrection
Definition: MappingExtrapolate.h:92
Nektar::MappingExtrapolate::m_mapping
GlobalMapping::MappingSharedPtr m_mapping
Definition: MappingExtrapolate.h:90
Nektar::Extrapolate::m_bnd_dim
int m_bnd_dim
bounday dimensionality
Definition: Extrapolate.h:229
Nektar::Extrapolate::MountHOPBCs
void MountHOPBCs(int HBCdata, NekDouble kinvis, Array< OneD, NekDouble > &Q, Array< OneD, const NekDouble > &Advection)
Definition: Extrapolate.h:376
Nektar::StdRegions::StdExpansion
The base class for all shapes.
Definition: StdExpansion.h:69
Vmath::Smul
void Smul(int n, const T alpha, const T *x, const int incx, T *y, const int incy)
Scalar multiply y = alpha*y.
Definition: Vmath.cpp:199
Nektar::Extrapolate::v_CalcNeumannPressureBCs
virtual void v_CalcNeumannPressureBCs(const Array< OneD, const Array< OneD, NekDouble > > &fields, const Array< OneD, const Array< OneD, NekDouble > > &N, NekDouble kinvis)
Definition: Extrapolate.cpp:161
Nektar::MultiRegions::DirCartesianMap
MultiRegions::Direction const DirCartesianMap[]
Definition: ExpList.h:86
Nektar::Extrapolate::m_pressureHBCs
Array< OneD, Array< OneD, NekDouble > > m_pressureHBCs
Storage for current and previous levels of high order pressure boundary conditions.
Definition: Extrapolate.h:271
Nektar::Extrapolate::m_HBCdata
Array< OneD, HBCInfo > m_HBCdata
data structure to old all the information regarding High order pressure BCs
Definition: Extrapolate.h:277
Nektar::StdRegions::StdExpansionSharedPtr
boost::shared_ptr< StdExpansion > StdExpansionSharedPtr
Definition: StdExpansion.h:1873
Vmath::Vcopy
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1047
Vmath::Vadd
void Vadd(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Add vector z = x+y.
Definition: Vmath.cpp:285
Vmath::Vmul
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.cpp:169
void Nektar::MappingExtrapolate::v_CorrectPressureBCs ( const Array< OneD, NekDouble > &  pressure)
virtual

Casting the boundary expansion to the specific case

Picking up the element where the HOPBc is located

Assigning

Reimplemented from Nektar::Extrapolate.

Definition at line 75 of file MappingExtrapolate.cpp.

References ASSERTL0, Nektar::MultiRegions::DirCartesianMap, Nektar::MultiRegions::e2D, Nektar::MultiRegions::e3D, Nektar::MultiRegions::e3DH1D, m_bcCorrection, Nektar::Extrapolate::m_bnd_dim, Nektar::Extrapolate::m_fields, Nektar::Extrapolate::m_HBCdata, m_mapping, Nektar::Extrapolate::m_PBndConds, Nektar::Extrapolate::m_PBndExp, Nektar::Extrapolate::m_pressure, Nektar::Extrapolate::m_pressureBCsMaxPts, m_pressureRelaxation, Vmath::Smul(), Vmath::Vadd(), Vmath::Vcopy(), Vmath::Vmul(), and Vmath::Vsub().

77  {
78  if(m_HBCdata.num_elements()>0)
79  {
80  int cnt, n;
81  int physTot = m_fields[0]->GetTotPoints();
82  int nvel = m_fields.num_elements()-1;
83 
84  Array<OneD, NekDouble> Vals;
85  // Remove previous correction
86  for(cnt = n = 0; n < m_PBndConds.num_elements(); ++n)
87  {
88  if(m_PBndConds[n]->GetUserDefined() == "H")
89  {
90  int nq = m_PBndExp[n]->GetNcoeffs();
91  Vmath::Vsub(nq, &(m_PBndExp[n]->GetCoeffs()[0]), 1,
92  &(m_bcCorrection[cnt]), 1,
93  &(m_PBndExp[n]->UpdateCoeffs()[0]), 1);
94  cnt += nq;
95  }
96  }
97 
98  // Calculate new correction
99  Array<OneD, NekDouble> Jac(physTot, 0.0);
100  m_mapping->GetJacobian(Jac);
101 
102  Array<OneD, Array<OneD, NekDouble> > correction(nvel);
103  Array<OneD, Array<OneD, NekDouble> > gradP(nvel);
104  Array<OneD, Array<OneD, NekDouble> > wk(nvel);
105  Array<OneD, Array<OneD, NekDouble> > wk2(nvel);
106  for (int i=0; i<nvel; i++)
107  {
108  wk[i] = Array<OneD, NekDouble> (physTot, 0.0);
109  gradP[i] = Array<OneD, NekDouble> (physTot, 0.0);
110  correction[i] = Array<OneD, NekDouble> (physTot, 0.0);
111  }
112 
113  // Calculate G(p)
114  for(int i = 0; i < nvel; ++i)
115  {
116  m_fields[0]->PhysDeriv(MultiRegions::DirCartesianMap[i], pressure, gradP[i]);
117  if(m_fields[0]->GetWaveSpace())
118  {
119  m_fields[0]->HomogeneousBwdTrans(gradP[i], wk[i]);
120  }
121  else
122  {
123  Vmath::Vcopy(physTot, gradP[i], 1, wk[i], 1);
124  }
125  }
126  m_mapping->RaiseIndex(wk, correction); // G(p)
127 
128  // alpha*J*(G(p))
129  if (!m_mapping->HasConstantJacobian())
130  {
131  for(int i = 0; i < nvel; ++i)
132  {
133  Vmath::Vmul(physTot, correction[i], 1, Jac, 1, correction[i], 1);
134  }
135  }
136  for(int i = 0; i < nvel; ++i)
137  {
138  Vmath::Smul(physTot, m_pressureRelaxation, correction[i], 1, correction[i], 1);
139  }
140 
141  if(m_pressure->GetWaveSpace())
142  {
143  for(int i = 0; i < nvel; ++i)
144  {
145  m_pressure->HomogeneousFwdTrans(correction[i], correction[i]);
146  }
147  }
148  // p_i - alpha*J*div(G(p))
149  for (int i = 0; i < nvel; ++i)
150  {
151  Vmath::Vsub(physTot, gradP[i], 1, correction[i], 1, correction[i], 1);
152  }
153 
154  // Get value at boundary and calculate Inner product
155  StdRegions::StdExpansionSharedPtr Pbc;
156  StdRegions::StdExpansionSharedPtr elmt;
157  Array<OneD, Array<OneD, const NekDouble> > correctionElmt(m_bnd_dim);
158  Array<OneD, Array<OneD, NekDouble> > BndValues(m_bnd_dim);
159  for(int i = 0; i < m_bnd_dim; i++)
160  {
161  BndValues[i] = Array<OneD, NekDouble> (m_pressureBCsMaxPts,0.0);
162  }
163  for(int j = 0 ; j < m_HBCdata.num_elements() ; j++)
164  {
165  /// Casting the boundary expansion to the specific case
166  Pbc = boost::dynamic_pointer_cast<StdRegions::StdExpansion>
167  (m_PBndExp[m_HBCdata[j].m_bndryID]
168  ->GetExp(m_HBCdata[j].m_bndElmtID));
169 
170  /// Picking up the element where the HOPBc is located
171  elmt = m_pressure->GetExp(m_HBCdata[j].m_globalElmtID);
172 
173  /// Assigning
174  for(int i = 0; i < m_bnd_dim; i++)
175  {
176  correctionElmt[i] = correction[i] + m_HBCdata[j].m_physOffset;
177  }
178  Vals = m_bcCorrection + m_HBCdata[j].m_coeffOffset;
179  // Getting values on the edge and filling the correction
180  switch(m_pressure->GetExpType())
181  {
182  case MultiRegions::e2D:
183  case MultiRegions::e3DH1D:
184  {
185  elmt->GetEdgePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
186  correctionElmt[0], BndValues[0]);
187  elmt->GetEdgePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
188  correctionElmt[1], BndValues[1]);
189 
190  // InnerProduct
191  Pbc->NormVectorIProductWRTBase(BndValues[0], BndValues[1],
192  Vals);
193  }
194  break;
195 
196  case MultiRegions::e3D:
197  {
198  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
199  correctionElmt[0], BndValues[0]);
200  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
201  correctionElmt[1], BndValues[1]);
202  elmt->GetFacePhysVals(m_HBCdata[j].m_elmtTraceID, Pbc,
203  correctionElmt[2], BndValues[2]);
204  Pbc->NormVectorIProductWRTBase(BndValues[0], BndValues[1],
205  BndValues[2], Vals);
206  }
207  break;
208  default:
209  ASSERTL0(0,"Dimension not supported");
210  break;
211  }
212  }
213 
214  // Apply new correction
215  for(cnt = n = 0; n < m_PBndConds.num_elements(); ++n)
216  {
217  if(m_PBndConds[n]->GetUserDefined() == "H")
218  {
219  int nq = m_PBndExp[n]->GetNcoeffs();
220  Vmath::Vadd(nq, &(m_PBndExp[n]->GetCoeffs()[0]), 1,
221  &(m_bcCorrection[cnt]), 1,
222  &(m_PBndExp[n]->UpdateCoeffs()[0]), 1);
223  cnt += nq;
224  }
225  }
226  }
227  }
ASSERTL0
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:161
Nektar::Extrapolate::m_pressure
MultiRegions::ExpListSharedPtr m_pressure
Pointer to field holding pressure field.
Definition: Extrapolate.h:215
Nektar::Extrapolate::m_pressureBCsMaxPts
int m_pressureBCsMaxPts
Maximum points used in pressure BC evaluation.
Definition: Extrapolate.h:241
Nektar::Extrapolate::m_PBndExp
Array< OneD, MultiRegions::ExpListSharedPtr > m_PBndExp
pressure boundary conditions expansion container
Definition: Extrapolate.h:235
Nektar::Extrapolate::m_fields
Array< OneD, MultiRegions::ExpListSharedPtr > m_fields
Definition: Extrapolate.h:212
Nektar::MappingExtrapolate::m_bcCorrection
Array< OneD, NekDouble > m_bcCorrection
Definition: MappingExtrapolate.h:92
Nektar::MappingExtrapolate::m_mapping
GlobalMapping::MappingSharedPtr m_mapping
Definition: MappingExtrapolate.h:90
Nektar::Extrapolate::m_bnd_dim
int m_bnd_dim
bounday dimensionality
Definition: Extrapolate.h:229
Nektar::StdRegions::StdExpansion
The base class for all shapes.
Definition: StdExpansion.h:69
Vmath::Smul
void Smul(int n, const T alpha, const T *x, const int incx, T *y, const int incy)
Scalar multiply y = alpha*y.
Definition: Vmath.cpp:199
Vmath::Vsub
void Vsub(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Subtract vector z = x-y.
Definition: Vmath.cpp:329
Nektar::MultiRegions::DirCartesianMap
MultiRegions::Direction const DirCartesianMap[]
Definition: ExpList.h:86
Nektar::Extrapolate::m_HBCdata
Array< OneD, HBCInfo > m_HBCdata
data structure to old all the information regarding High order pressure BCs
Definition: Extrapolate.h:277
Nektar::StdRegions::StdExpansionSharedPtr
boost::shared_ptr< StdExpansion > StdExpansionSharedPtr
Definition: StdExpansion.h:1873
Nektar::Extrapolate::m_PBndConds
Array< OneD, const SpatialDomains::BoundaryConditionShPtr > m_PBndConds
pressure boundary conditions container
Definition: Extrapolate.h:232
Vmath::Vcopy
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1047
Vmath::Vadd
void Vadd(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Add vector z = x+y.
Definition: Vmath.cpp:285
Vmath::Vmul
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.cpp:169

Member Data Documentation

std::string Nektar::MappingExtrapolate::className
static
Initial value:
= GetExtrapolateFactory().RegisterCreatorFunction(
"Mapping",
MappingExtrapolate::create,
"Mapping")

Name of class.

Registers the class with the Factory.

Definition at line 70 of file MappingExtrapolate.h.

Array<OneD, NekDouble> Nektar::MappingExtrapolate::m_bcCorrection
protected

Definition at line 92 of file MappingExtrapolate.h.

Referenced by v_CalcNeumannPressureBCs(), and v_CorrectPressureBCs().

bool Nektar::MappingExtrapolate::m_implicitPressure
protected

Definition at line 96 of file MappingExtrapolate.h.

Referenced by MappingExtrapolate(), and v_CalcNeumannPressureBCs().

bool Nektar::MappingExtrapolate::m_implicitViscous
protected

Definition at line 97 of file MappingExtrapolate.h.

Referenced by MappingExtrapolate(), and v_CalcNeumannPressureBCs().

GlobalMapping::MappingSharedPtr Nektar::MappingExtrapolate::m_mapping
protected

Definition at line 90 of file MappingExtrapolate.h.

Referenced by MappingExtrapolate(), v_CalcNeumannPressureBCs(), and v_CorrectPressureBCs().

NekDouble Nektar::MappingExtrapolate::m_pressureRelaxation
protected

Definition at line 100 of file MappingExtrapolate.h.

Referenced by MappingExtrapolate(), v_CalcNeumannPressureBCs(), and v_CorrectPressureBCs().

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