Nektar++
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#include <HexExp.h>
Public Member Functions | |
HexExp (const LibUtilities::BasisKey &Ba, const LibUtilities::BasisKey &Bb, const LibUtilities::BasisKey &Bc, const SpatialDomains::HexGeomSharedPtr &geom) | |
Constructor using BasisKey class for quadrature points and order definition. More... | |
HexExp (const HexExp &T) | |
Copy Constructor. More... | |
~HexExp () | |
Destructor. More... | |
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StdHexExp () | |
StdHexExp (const LibUtilities::BasisKey &Ba, const LibUtilities::BasisKey &Bb, const LibUtilities::BasisKey &Bc) | |
StdHexExp (const StdHexExp &T) | |
~StdHexExp () | |
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StdExpansion3D () | |
StdExpansion3D (int numcoeffs, const LibUtilities::BasisKey &Ba, const LibUtilities::BasisKey &Bb, const LibUtilities::BasisKey &Bc) | |
StdExpansion3D (const StdExpansion3D &T) | |
virtual | ~StdExpansion3D () |
void | PhysTensorDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray_d1, Array< OneD, NekDouble > &outarray_d2, Array< OneD, NekDouble > &outarray_d3) |
Calculate the 3D derivative in the local tensor/collapsed coordinate at the physical points. More... | |
void | BwdTrans_SumFacKernel (const Array< OneD, const NekDouble > &base0, const Array< OneD, const NekDouble > &base1, const Array< OneD, const NekDouble > &base2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp, bool doCheckCollDir0, bool doCheckCollDir1, bool doCheckCollDir2) |
void | IProductWRTBase_SumFacKernel (const Array< OneD, const NekDouble > &base0, const Array< OneD, const NekDouble > &base1, const Array< OneD, const NekDouble > &base2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp, bool doCheckCollDir0, bool doCheckCollDir1, bool doCheckCollDir2) |
int | GetNedges () const |
return the number of edges in 3D expansion More... | |
int | GetEdgeNcoeffs (const int i) const |
This function returns the number of expansion coefficients belonging to the i-th edge. More... | |
void | GetEdgeInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards) |
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StdExpansion () | |
Default Constructor. More... | |
StdExpansion (const int numcoeffs, const int numbases, const LibUtilities::BasisKey &Ba=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bb=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bc=LibUtilities::NullBasisKey) | |
Constructor. More... | |
StdExpansion (const StdExpansion &T) | |
Copy Constructor. More... | |
virtual | ~StdExpansion () |
Destructor. More... | |
int | GetNumBases () const |
This function returns the number of 1D bases used in the expansion. More... | |
const Array< OneD, const LibUtilities::BasisSharedPtr > & | GetBase () const |
This function gets the shared point to basis. More... | |
const LibUtilities::BasisSharedPtr & | GetBasis (int dir) const |
This function gets the shared point to basis in the dir direction. More... | |
int | GetNcoeffs (void) const |
This function returns the total number of coefficients used in the expansion. More... | |
int | GetTotPoints () const |
This function returns the total number of quadrature points used in the element. More... | |
LibUtilities::BasisType | GetBasisType (const int dir) const |
This function returns the type of basis used in the dir direction. More... | |
int | GetBasisNumModes (const int dir) const |
This function returns the number of expansion modes in the dir direction. More... | |
int | EvalBasisNumModesMax (void) const |
This function returns the maximum number of expansion modes over all local directions. More... | |
LibUtilities::PointsType | GetPointsType (const int dir) const |
This function returns the type of quadrature points used in the dir direction. More... | |
int | GetNumPoints (const int dir) const |
This function returns the number of quadrature points in the dir direction. More... | |
const Array< OneD, const NekDouble > & | GetPoints (const int dir) const |
This function returns a pointer to the array containing the quadrature points in dir direction. More... | |
int | GetNverts () const |
This function returns the number of vertices of the expansion domain. More... | |
int | GetTraceNcoeffs (const int i) const |
This function returns the number of expansion coefficients belonging to the i-th trace. More... | |
int | GetTraceIntNcoeffs (const int i) const |
int | GetTraceNumPoints (const int i) const |
This function returns the number of quadrature points belonging to the i-th trace. More... | |
const LibUtilities::BasisKey | GetTraceBasisKey (const int i, int k=-1) const |
This function returns the basis key belonging to the i-th trace. More... | |
LibUtilities::PointsKey | GetTracePointsKey (const int i, int k=-1) const |
This function returns the basis key belonging to the i-th trace. More... | |
int | NumBndryCoeffs (void) const |
int | NumDGBndryCoeffs (void) const |
const LibUtilities::PointsKey | GetNodalPointsKey () const |
This function returns the type of expansion Nodal point type if defined. More... | |
int | GetNtraces () const |
Returns the number of trace elements connected to this element. More... | |
LibUtilities::ShapeType | DetShapeType () const |
This function returns the shape of the expansion domain. More... | |
std::shared_ptr< StdExpansion > | GetStdExp (void) const |
std::shared_ptr< StdExpansion > | GetLinStdExp (void) const |
int | GetShapeDimension () const |
bool | IsBoundaryInteriorExpansion () |
bool | IsNodalNonTensorialExp () |
void | BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function performs the Backward transformation from coefficient space to physical space. More... | |
void | FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function performs the Forward transformation from physical space to coefficient space. More... | |
void | FwdTrans_BndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
NekDouble | Integral (const Array< OneD, const NekDouble > &inarray) |
This function integrates the specified function over the domain. More... | |
void | FillMode (const int mode, Array< OneD, NekDouble > &outarray) |
This function fills the array outarray with the mode-th mode of the expansion. More... | |
void | IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
this function calculates the inner product of a given function f with the different modes of the expansion More... | |
void | IProductWRTBase (const Array< OneD, const NekDouble > &base, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int coll_check) |
void | IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | IProductWRTDirectionalDerivBase (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
int | GetElmtId () |
Get the element id of this expansion when used in a list by returning value of m_elmt_id. More... | |
void | SetElmtId (const int id) |
Set the element id of this expansion when used in a list by returning value of m_elmt_id. More... | |
void | GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2=NullNekDouble1DArray, Array< OneD, NekDouble > &coords_3=NullNekDouble1DArray) |
this function returns the physical coordinates of the quadrature points of the expansion More... | |
void | GetCoord (const Array< OneD, const NekDouble > &Lcoord, Array< OneD, NekDouble > &coord) |
given the coordinates of a point of the element in the local collapsed coordinate system, this function calculates the physical coordinates of the point More... | |
DNekMatSharedPtr | GetStdMatrix (const StdMatrixKey &mkey) |
DNekBlkMatSharedPtr | GetStdStaticCondMatrix (const StdMatrixKey &mkey) |
void | NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray) |
void | NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
void | NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray) |
void | NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble > > &Fvec, Array< OneD, NekDouble > &outarray) |
DNekScalBlkMatSharedPtr | GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey) |
void | DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey) |
int | CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset) |
NekDouble | StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals) |
int | GetCoordim () |
void | GetBoundaryMap (Array< OneD, unsigned int > &outarray) |
void | GetInteriorMap (Array< OneD, unsigned int > &outarray) |
int | GetVertexMap (const int localVertexId, bool useCoeffPacking=false) |
void | GetTraceToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1) |
void | GetTraceInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, const Orientation traceOrient=eForwards) |
void | GetTraceNumModes (const int tid, int &numModes0, int &numModes1, const Orientation traceOrient=eDir1FwdDir1_Dir2FwdDir2) |
void | MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
DNekMatSharedPtr | CreateGeneralMatrix (const StdMatrixKey &mkey) |
this function generates the mass matrix \(\mathbf{M}[i][j] = \int \phi_i(\mathbf{x}) \phi_j(\mathbf{x}) d\mathbf{x}\) More... | |
void | GeneralMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | MassMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LaplacianMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | ReduceOrderCoeffs (int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | SVVLaplacianFilter (Array< OneD, NekDouble > &array, const StdMatrixKey &mkey) |
void | ExponentialFilter (Array< OneD, NekDouble > &array, const NekDouble alpha, const NekDouble exponent, const NekDouble cutoff) |
void | LaplacianMatrixOp (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | WeakDerivMatrixOp (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | WeakDirectionalDerivMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | MassLevelCurvatureMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LinearAdvectionDiffusionReactionMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true) |
void | HelmholtzMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
DNekMatSharedPtr | GenMatrix (const StdMatrixKey &mkey) |
void | PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray) |
void | PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | PhysDeriv_s (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_ds) |
void | PhysDeriv_n (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_dn) |
void | PhysDirectionalDeriv (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &outarray) |
void | StdPhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray) |
void | StdPhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
NekDouble | PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals) |
This function evaluates the expansion at a single (arbitrary) point of the domain. More... | |
NekDouble | PhysEvaluate (const Array< OneD, DNekMatSharedPtr > &I, const Array< OneD, const NekDouble > &physvals) |
This function evaluates the expansion at a single (arbitrary) point of the domain. More... | |
NekDouble | PhysEvaluateBasis (const Array< OneD, const NekDouble > &coords, int mode) |
This function evaluates the basis function mode mode at a point coords of the domain. More... | |
void | LocCoordToLocCollapsed (const Array< OneD, const NekDouble > &xi, Array< OneD, NekDouble > &eta) |
Convert local cartesian coordinate xi into local collapsed coordinates eta. More... | |
void | LocCollapsedToLocCoord (const Array< OneD, const NekDouble > &eta, Array< OneD, NekDouble > &xi) |
Convert local collapsed coordinates eta into local cartesian coordinate xi. More... | |
virtual void | v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray) |
virtual void | v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
virtual void | v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray) |
NekDouble | Linf (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray) |
Function to evaluate the discrete \( L_\infty\) error \( |\epsilon|_\infty = \max |u - u_{exact}|\) where \( u_{exact}\) is given by the array sol. More... | |
NekDouble | L2 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray) |
Function to evaluate the discrete \( L_2\) error, \( | \epsilon |_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More... | |
NekDouble | H1 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray) |
Function to evaluate the discrete \( H^1\) error, \( | \epsilon |^1_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 + \nabla(u - u_{exact})\cdot\nabla(u - u_{exact})\cdot dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More... | |
const LibUtilities::PointsKeyVector | GetPointsKeys () const |
DNekMatSharedPtr | BuildInverseTransformationMatrix (const DNekScalMatSharedPtr &m_transformationmatrix) |
void | PhysInterpToSimplexEquiSpaced (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int npset=-1) |
This function performs an interpolation from the physical space points provided at input into an array of equispaced points which are not the collapsed coordinate. So for a tetrahedron you will only get a tetrahedral number of values. More... | |
void | GetSimplexEquiSpacedConnectivity (Array< OneD, int > &conn, bool standard=true) |
This function provides the connectivity of local simplices (triangles or tets) to connect the equispaced data points provided by PhysInterpToSimplexEquiSpaced. More... | |
void | EquiSpacedToCoeffs (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function performs a projection/interpolation from the equispaced points sometimes used in post-processing onto the coefficient space. More... | |
template<class T > | |
std::shared_ptr< T > | as () |
void | IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true) |
void | GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat) |
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Expansion3D (SpatialDomains::Geometry3DSharedPtr pGeom) | |
virtual | ~Expansion3D () |
void | SetTraceToGeomOrientation (Array< OneD, NekDouble > &inout) |
Align trace orientation with the geometry orientation. More... | |
void | SetFaceToGeomOrientation (const int face, Array< OneD, NekDouble > &inout) |
Align face orientation with the geometry orientation. More... | |
void | AddHDGHelmholtzFaceTerms (const NekDouble tau, const int edge, Array< OneD, NekDouble > &facePhys, const StdRegions::VarCoeffMap &dirForcing, Array< OneD, NekDouble > &outarray) |
void | AddNormTraceInt (const int dir, Array< OneD, ExpansionSharedPtr > &FaceExp, Array< OneD, Array< OneD, NekDouble > > &faceCoeffs, Array< OneD, NekDouble > &outarray) |
void | AddNormTraceInt (const int dir, Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &FaceExp, Array< OneD, NekDouble > &outarray, const StdRegions::VarCoeffMap &varcoeffs) |
void | AddFaceBoundaryInt (const int face, ExpansionSharedPtr &FaceExp, Array< OneD, NekDouble > &facePhys, Array< OneD, NekDouble > &outarray, const StdRegions::VarCoeffMap &varcoeffs=StdRegions::NullVarCoeffMap) |
SpatialDomains::Geometry3DSharedPtr | GetGeom3D () const |
void | v_ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1) |
void | v_NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble > > &Fvec, Array< OneD, NekDouble > &outarray) |
Array< OneD, unsigned int > | GetEdgeInverseBoundaryMap (int eid) |
Array< OneD, unsigned int > | GetTraceInverseBoundaryMap (int fid, StdRegions::Orientation faceOrient=StdRegions::eNoOrientation, int P1=-1, int P2=-1) |
void | GetInverseBoundaryMaps (Array< OneD, unsigned int > &vmap, Array< OneD, Array< OneD, unsigned int > > &emap, Array< OneD, Array< OneD, unsigned int > > &fmap) |
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Expansion (SpatialDomains::GeometrySharedPtr pGeom) | |
Expansion (const Expansion &pSrc) | |
virtual | ~Expansion () |
void | SetTraceExp (const int traceid, ExpansionSharedPtr &f) |
ExpansionSharedPtr | GetTraceExp (const int traceid) |
DNekScalMatSharedPtr | GetLocMatrix (const LocalRegions::MatrixKey &mkey) |
DNekScalMatSharedPtr | GetLocMatrix (const StdRegions::MatrixType mtype, const StdRegions::ConstFactorMap &factors=StdRegions::NullConstFactorMap, const StdRegions::VarCoeffMap &varcoeffs=StdRegions::NullVarCoeffMap) |
SpatialDomains::GeometrySharedPtr | GetGeom () const |
void | Reset () |
IndexMapValuesSharedPtr | CreateIndexMap (const IndexMapKey &ikey) |
const SpatialDomains::GeomFactorsSharedPtr & | GetMetricInfo () const |
DNekMatSharedPtr | BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType) |
DNekMatSharedPtr | BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd) |
void | ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType) |
void | AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
void | AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
void | AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
void | DGDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble > > &coeffs, Array< OneD, NekDouble > &outarray) |
NekDouble | VectorFlux (const Array< OneD, Array< OneD, NekDouble > > &vec) |
IndexMapValuesSharedPtr | GetIndexMap (const IndexMapKey &ikey) |
void | AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) |
ExpansionSharedPtr | GetLeftAdjacentElementExp () const |
ExpansionSharedPtr | GetRightAdjacentElementExp () const |
int | GetLeftAdjacentElementTrace () const |
int | GetRightAdjacentElementTrace () const |
void | SetAdjacentElementExp (int traceid, ExpansionSharedPtr &e) |
StdRegions::Orientation | GetTraceOrient (int trace) |
void | SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Divided by the metric jacobi and quadrature weights. More... | |
void | GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray) |
Extract the metric factors to compute the contravariant fluxes along edge edge and stores them into outarray following the local edge orientation (i.e. anticlockwise convention). More... | |
void | GetTracePhysVals (const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient=StdRegions::eNoOrientation) |
void | GetTracePhysMap (const int edge, Array< OneD, int > &outarray) |
void | ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1) |
const NormalVector & | GetTraceNormal (const int id) const |
void | ComputeTraceNormal (const int id) |
const Array< OneD, const NekDouble > & | GetPhysNormals (void) |
void | SetPhysNormals (Array< OneD, const NekDouble > &normal) |
void | SetUpPhysNormals (const int trace) |
void | AddRobinMassMatrix (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat) |
virtual void | AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs) |
const Array< OneD, const NekDouble > & | GetElmtBndNormDirElmtLen (const int nbnd) const |
Protected Member Functions | |
virtual NekDouble | v_Integral (const Array< OneD, const NekDouble > &inarray) |
Integrate the physical point list inarray over region. More... | |
virtual void | v_PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) |
Calculate the derivative of the physical points. More... | |
virtual void | v_PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Calculate the derivative of the physical points in a single direction. More... | |
void | v_PhysDirectionalDeriv (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &out) |
Physical derivative along a direction vector. More... | |
virtual void | v_FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Forward transform from physical quadrature space stored in inarray and evaluate the expansion coefficients and store in (this)->_coeffs. More... | |
virtual void | v_IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Calculate the inner product of inarray with respect to the elements basis. More... | |
virtual void | v_IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true) |
Calculate the inner product of inarray with respect to the given basis B = base0 * base1 * base2. More... | |
virtual void | v_IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Calculates the inner product \( I_{pqr} = (u, \partial_{x_i} \phi_{pqr}) \). More... | |
virtual void | v_AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble > > &outarray) |
void | IProductWRTDerivBase_MatOp (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | v_IProductWRTDirectionalDerivBase (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | IProductWRTDirectionalDerivBase_SumFac (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual NekDouble | v_StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals) |
virtual NekDouble | v_PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals) |
This function evaluates the expansion at a single (arbitrary) point of the domain. More... | |
virtual void | v_GetCoord (const Array< OneD, const NekDouble > &Lcoords, Array< OneD, NekDouble > &coords) |
Retrieves the physical coordinates of a given set of reference coordinates. More... | |
virtual void | v_GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2, Array< OneD, NekDouble > &coords_3) |
virtual LibUtilities::ShapeType | v_DetShapeType () const |
Return the region shape using the enum-list of ShapeType. More... | |
virtual StdRegions::StdExpansionSharedPtr | v_GetStdExp (void) const |
virtual StdRegions::StdExpansionSharedPtr | v_GetLinStdExp (void) const |
virtual void | v_ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int mode_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType) |
virtual bool | v_GetFaceDGForwards (const int i) const |
virtual void | v_GetTracePhysMap (const int face, Array< OneD, int > &outarray) |
void | v_ComputeTraceNormal (const int face) |
virtual void | v_MassMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_LaplacianMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_LaplacianMatrixOp (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_WeakDerivMatrixOp (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_WeakDirectionalDerivMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_MassLevelCurvatureMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_HelmholtzMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
void | v_GeneralMatrixOp_MatOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_ReduceOrderCoeffs (int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_SVVLaplacianFilter (Array< OneD, NekDouble > &array, const StdRegions::StdMatrixKey &mkey) |
virtual DNekMatSharedPtr | v_GenMatrix (const StdRegions::StdMatrixKey &mkey) |
virtual DNekMatSharedPtr | v_CreateStdMatrix (const StdRegions::StdMatrixKey &mkey) |
DNekScalMatSharedPtr | CreateMatrix (const MatrixKey &mkey) |
DNekScalBlkMatSharedPtr | CreateStaticCondMatrix (const MatrixKey &mkey) |
virtual DNekScalMatSharedPtr | v_GetLocMatrix (const MatrixKey &mkey) |
virtual DNekScalBlkMatSharedPtr | v_GetLocStaticCondMatrix (const MatrixKey &mkey) |
void | v_DropLocStaticCondMatrix (const MatrixKey &mkey) |
virtual void | v_ComputeLaplacianMetric () |
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virtual void | v_StdPhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) |
virtual void | v_StdPhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_BwdTrans_SumFacKernel (const Array< OneD, const NekDouble > &base0, const Array< OneD, const NekDouble > &base1, const Array< OneD, const NekDouble > &base2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp, bool doCheckCollDir0, bool doCheckCollDir1, bool doCheckCollDir2) |
virtual void | v_IProductWRTBase_MatOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_IProductWRTBase_SumFacKernel (const Array< OneD, const NekDouble > &base0, const Array< OneD, const NekDouble > &base1, const Array< OneD, const NekDouble > &base2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp, bool doCheckCollDir0, bool doCheckCollDir1, bool doCheckCollDir2) |
virtual void | v_IProductWRTDerivBase_MatOp (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_LocCoordToLocCollapsed (const Array< OneD, const NekDouble > &xi, Array< OneD, NekDouble > &eta) |
virtual void | v_LocCollapsedToLocCoord (const Array< OneD, const NekDouble > &eta, Array< OneD, NekDouble > &xi) |
virtual void | v_FillMode (const int mode, Array< OneD, NekDouble > &outarray) |
NekDouble | v_PhysEvaluateBasis (const Array< OneD, const NekDouble > &coords, int mode) final |
virtual int | v_GetNverts () const |
virtual int | v_GetNedges () const |
virtual int | v_GetNtraces () const |
virtual int | v_NumBndryCoeffs () const |
virtual int | v_NumDGBndryCoeffs () const |
virtual int | v_GetTraceNcoeffs (const int i) const |
virtual int | v_GetTotalTraceIntNcoeffs () const |
virtual int | v_GetTraceIntNcoeffs (const int i) const |
virtual int | v_GetTraceNumPoints (const int i) const |
virtual LibUtilities::PointsKey | v_GetTracePointsKey (const int i, const int j) const |
virtual int | v_CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset) |
virtual const LibUtilities::BasisKey | v_GetTraceBasisKey (const int i, const int k) const |
virtual bool | v_IsBoundaryInteriorExpansion () |
virtual void | v_GetTraceNumModes (const int fid, int &numModes0, int &numModes1, Orientation faceOrient=eDir1FwdDir1_Dir2FwdDir2) |
virtual int | v_GetEdgeNcoeffs (const int i) const |
virtual int | v_GetVertexMap (int localVertexId, bool useCoeffPacking=false) |
virtual void | v_GetInteriorMap (Array< OneD, unsigned int > &outarray) |
virtual void | v_GetBoundaryMap (Array< OneD, unsigned int > &outarray) |
virtual void | v_GetTraceToElementMap (const int fid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation faceOrient, int P, int Q) |
virtual void | v_GetEdgeInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, const Orientation traceOrient=eDir1FwdDir1_Dir2FwdDir2) |
virtual void | v_GetTraceInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, const Orientation traceOrient=eDir1FwdDir1_Dir2FwdDir2) |
virtual void | v_MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_ExponentialFilter (Array< OneD, NekDouble > &array, const NekDouble alpha, const NekDouble exponent, const NekDouble cutoff) |
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virtual NekDouble | v_PhysEvaluate (const Array< OneD, DNekMatSharedPtr > &I, const Array< OneD, const NekDouble > &physvals) |
virtual void | v_LaplacianMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_HelmholtzMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdRegions::StdMatrixKey &mkey) |
virtual void | v_GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat) |
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DNekMatSharedPtr | CreateStdMatrix (const StdMatrixKey &mkey) |
DNekBlkMatSharedPtr | CreateStdStaticCondMatrix (const StdMatrixKey &mkey) |
Create the static condensation of a matrix when using a boundary interior decomposition. More... | |
void | BwdTrans_MatOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | IProductWRTDirectionalDerivBase_SumFac (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | GeneralMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | MassMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LaplacianMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LaplacianMatrixOp_MatFree_Kernel (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp) |
void | LaplacianMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LaplacianMatrixOp_MatFree (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | WeakDerivMatrixOp_MatFree (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | WeakDirectionalDerivMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | MassLevelCurvatureMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | LinearAdvectionDiffusionReactionMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true) |
void | HelmholtzMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
void | HelmholtzMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey) |
virtual void | v_SetCoeffsToOrientation (Array< OneD, NekDouble > &coeffs, StdRegions::Orientation dir) |
template<int DIR> | |
NekDouble | BaryEvaluate (const NekDouble &coord, const NekDouble *physvals) |
This function performs the barycentric interpolation of the polynomial stored in coord at a point physvals using barycentric interpolation weights in direction. More... | |
template<int DIR> | |
NekDouble | BaryEvaluateBasis (const NekDouble &coord, const int &mode) |
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virtual void | v_DGDeriv (const int dir, const Array< OneD, const NekDouble > &incoeffs, Array< OneD, ExpansionSharedPtr > &FaceExp, Array< OneD, Array< OneD, NekDouble > > &faceCoeffs, Array< OneD, NekDouble > &out_d) |
Evaluate coefficients of weak deriviative in the direction dir given the input coefficicents incoeffs and the imposed boundary values in EdgeExp (which will have its phys space updated). More... | |
virtual void | v_AddFaceNormBoundaryInt (const int face, const ExpansionSharedPtr &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddRobinMassMatrix (const int face, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat) |
virtual StdRegions::Orientation | v_GetTraceOrient (int face) |
virtual void | v_GetTracePhysVals (const int face, const StdRegions::StdExpansionSharedPtr &FaceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient) |
Extract the physical values along face face from inarray into outarray following the local face orientation and point distribution defined by defined in FaceExp. More... | |
void | GetPhysFaceVarCoeffsFromElement (const int face, ExpansionSharedPtr &FaceExp, const Array< OneD, const NekDouble > &varcoeff, Array< OneD, NekDouble > &outarray) |
virtual Array< OneD, NekDouble > | v_GetnFacecdotMF (const int dir, const int face, ExpansionSharedPtr &FaceExp_f, const Array< OneD, const Array< OneD, NekDouble > > &normals, const StdRegions::VarCoeffMap &varcoeffs) |
virtual DNekMatSharedPtr | v_BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType) |
virtual DNekMatSharedPtr | v_BuildInverseTransformationMatrix (const DNekScalMatSharedPtr &transformationmatrix) |
Build inverse and inverse transposed transformation matrix: \(\mathbf{R^{-1}}\) and \(\mathbf{R^{-T}}\). More... | |
virtual DNekMatSharedPtr | v_BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd) |
virtual const NormalVector & | v_GetTraceNormal (const int face) const |
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void | ComputeLaplacianMetric () |
void | ComputeQuadratureMetric () |
void | ComputeGmatcdotMF (const Array< TwoD, const NekDouble > &df, const Array< OneD, const NekDouble > &direction, Array< OneD, Array< OneD, NekDouble > > &dfdir) |
virtual void | v_MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
Array< OneD, NekDouble > | v_GetMF (const int dir, const int shapedim, const StdRegions::VarCoeffMap &varcoeffs) |
Array< OneD, NekDouble > | v_GetMFDiv (const int dir, const StdRegions::VarCoeffMap &varcoeffs) |
Array< OneD, NekDouble > | v_GetMFMag (const int dir, const StdRegions::VarCoeffMap &varcoeffs) |
virtual void | v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
virtual NekDouble | v_VectorFlux (const Array< OneD, Array< OneD, NekDouble > > &vec) |
virtual void | v_SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray) |
virtual const Array< OneD, const NekDouble > & | v_GetPhysNormals (void) |
virtual void | v_SetPhysNormals (Array< OneD, const NekDouble > &normal) |
virtual void | v_SetUpPhysNormals (const int id) |
virtual void | v_AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs) |
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HexExp () | |
virtual void | v_LaplacianMatrixOp_MatFree_Kernel (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp) |
Nektar::LocalRegions::HexExp::HexExp | ( | const LibUtilities::BasisKey & | Ba, |
const LibUtilities::BasisKey & | Bb, | ||
const LibUtilities::BasisKey & | Bc, | ||
const SpatialDomains::HexGeomSharedPtr & | geom | ||
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Constructor using BasisKey class for quadrature points and order definition.
@param Ba Basis key for first coordinate. @param Bb Basis key for second coordinate. @param Bc Basis key for third coordinate.
Definition at line 60 of file HexExp.cpp.
Nektar::LocalRegions::HexExp::HexExp | ( | const HexExp & | T | ) |
Nektar::LocalRegions::HexExp::~HexExp | ( | ) |
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Definition at line 1523 of file HexExp.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL2, Nektar::LocalRegions::Expansion::BuildTransformationMatrix(), Nektar::LocalRegions::Expansion::BuildVertexMatrix(), Nektar::StdRegions::StdMatrixKey::ConstFactorExists(), Nektar::StdRegions::StdExpansion::DetShapeType(), Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::eFactorLambda, Nektar::StdRegions::eFactorSVVCutoffRatio, Nektar::StdRegions::eHelmholtz, Nektar::StdRegions::eHybridDGHelmBndLam, Nektar::StdRegions::eHybridDGHelmholtz, Nektar::StdRegions::eHybridDGLamToQ0, Nektar::StdRegions::eHybridDGLamToQ1, Nektar::StdRegions::eHybridDGLamToQ2, Nektar::StdRegions::eHybridDGLamToU, Nektar::StdRegions::eInvHybridDGHelmholtz, Nektar::StdRegions::eInvLaplacianWithUnityMean, Nektar::StdRegions::eInvMass, Nektar::StdRegions::eIProductWRTBase, Nektar::StdRegions::eLaplacian, Nektar::StdRegions::eLaplacian00, Nektar::StdRegions::eLaplacian01, Nektar::StdRegions::eLaplacian02, Nektar::StdRegions::eLaplacian11, Nektar::StdRegions::eLaplacian12, Nektar::StdRegions::eLaplacian22, Nektar::StdRegions::eMass, Nektar::SpatialDomains::eNoGeomType, Nektar::StdRegions::ePreconLinearSpace, Nektar::StdRegions::ePreconLinearSpaceMass, Nektar::StdRegions::ePreconR, Nektar::StdRegions::ePreconRMass, Nektar::StdRegions::eWeakDeriv0, Nektar::StdRegions::eWeakDeriv1, Nektar::StdRegions::eWeakDeriv2, Nektar::StdRegions::StdExpansion::GenMatrix(), Nektar::StdRegions::StdMatrixKey::GetConstFactor(), Nektar::StdRegions::StdMatrixKey::GetConstFactors(), Nektar::StdRegions::StdExpansion::GetLocStaticCondMatrix(), Nektar::StdRegions::StdMatrixKey::GetMatrixType(), Nektar::StdRegions::StdMatrixKey::GetNVarCoeff(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdMatrixKey::GetShapeType(), Nektar::StdRegions::StdExpansion::GetStdMatrix(), Nektar::StdRegions::StdMatrixKey::GetVarCoeffs(), m_matrixManager, Nektar::LocalRegions::Expansion::m_metricinfo, and Nektar::Transpose().
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Definition at line 1822 of file HexExp.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL2, Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::eHelmholtz, Nektar::StdRegions::eLaplacian, Nektar::SpatialDomains::eNoGeomType, Nektar::StdRegions::StdExpansion::GetBoundaryMap(), Nektar::StdRegions::StdExpansion::GetInteriorMap(), Nektar::LocalRegions::Expansion::GetLocMatrix(), Nektar::StdRegions::StdMatrixKey::GetMatrixType(), Nektar::StdRegions::StdMatrixKey::GetNVarCoeff(), Nektar::StdRegions::StdExpansion::GetStdStaticCondMatrix(), Nektar::LocalRegions::Expansion::m_metricinfo, Nektar::StdRegions::StdExpansion::m_ncoeffs, and Nektar::StdRegions::StdExpansion::NumBndryCoeffs().
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Definition at line 557 of file HexExp.cpp.
References ASSERTL1, Nektar::StdRegions::StdExpansion::DetShapeType(), Blas::Dgemv(), Nektar::StdRegions::eIProductWRTDerivBase0, Nektar::StdRegions::eIProductWRTDerivBase1, Nektar::StdRegions::eIProductWRTDerivBase2, Nektar::StdRegions::StdExpansion::GetTotPoints(), m_matrixManager, and Nektar::StdRegions::StdExpansion::m_ncoeffs.
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Calculates the inner product \( I_{pqr} = (u, \partial_{x_i} \phi_{pqr}) \).
The derivative of the basis functions is performed using the chain rule in order to incorporate the geometric factors. Assuming that the basis functions are a tensor product \(\phi_{pqr}(\xi_1,\xi_2,\xi_3) = \phi_1(\xi_1)\phi_2(\xi_2)\phi_3(\xi_3)\), in the hexahedral element, this is straightforward and yields the result
\[ I_{pqr} = \sum_{k=1}^3 \left(u, \frac{\partial u}{\partial \xi_k} \frac{\partial \xi_k}{\partial x_i}\right) \]
dir | Direction in which to take the derivative. |
inarray | The function \( u \). |
outarray | Value of the inner product. |
Definition at line 467 of file HexExp.cpp.
References ASSERTL1, Nektar::StdRegions::StdExpansion3D::IProductWRTBase_SumFacKernel(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, Nektar::StdRegions::StdExpansion::MultiplyByQuadratureMetric(), v_AlignVectorToCollapsedDir(), and Vmath::Vadd().
Referenced by v_IProductWRTDerivBase().
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dir | Vector direction in which to take the derivative. |
inarray | The function \( u \). |
outarray | Value of the inner product. |
Definition at line 603 of file HexExp.cpp.
References Nektar::LocalRegions::Expansion::ComputeGmatcdotMF(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion3D::IProductWRTBase_SumFacKernel(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metricinfo, Nektar::StdRegions::StdExpansion::m_ncoeffs, Nektar::StdRegions::StdExpansion::MultiplyByQuadratureMetric(), Vmath::Vadd(), and Vmath::Vmul().
Referenced by v_IProductWRTDirectionalDerivBase().
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 519 of file HexExp.cpp.
References ASSERTL1, Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metricinfo, Vmath::Smul(), Vmath::Vcopy(), and Vmath::Vmul().
Referenced by IProductWRTDerivBase_SumFac().
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 2017 of file HexExp.cpp.
References Nektar::LocalRegions::Expansion::ComputeQuadratureMetric(), Nektar::SpatialDomains::eDeformed, Nektar::LocalRegions::eMetricLaplacian00, Nektar::LocalRegions::eMetricLaplacian01, Nektar::LocalRegions::eMetricLaplacian02, Nektar::LocalRegions::eMetricLaplacian11, Nektar::LocalRegions::eMetricLaplacian12, Nektar::LocalRegions::eMetricLaplacian22, Nektar::LocalRegions::eMetricQuadrature, Vmath::Fill(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::GetTotPoints(), Nektar::LocalRegions::Expansion::m_metricinfo, Nektar::LocalRegions::Expansion::m_metrics, Nektar::StdRegions::StdExpansion::MultiplyByQuadratureMetric(), and Vmath::Vcopy().
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 993 of file HexExp.cpp.
References ASSERTL0, Nektar::SpatialDomains::eMovingRegular, Nektar::SpatialDomains::eRegular, Vmath::Fill(), Nektar::StdRegions::StdExpansion::GetCoordim(), Nektar::LocalRegions::Expansion::GetGeom(), Nektar::LibUtilities::BasisKey::GetNumPoints(), Nektar::StdRegions::StdExpansion::GetNumPoints(), Nektar::LibUtilities::BasisKey::GetPointsKey(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::GetPointsType(), Nektar::StdRegions::StdExpansion::GetTraceBasisKey(), Nektar::LibUtilities::Interp2D(), Nektar::LocalRegions::Expansion::m_elmtBndNormDirElmtLen, Nektar::LocalRegions::Expansion3D::m_faceNormals, Vmath::Sdiv(), tinysimd::sqrt(), Vmath::Vcopy(), Vmath::Vmul(), Vmath::Vsqrt(), Vmath::Vvtvp(), and Vmath::Zero().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1509 of file HexExp.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), and Nektar::StdRegions::StdExpansion::m_base.
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Return the region shape using the enum-list of ShapeType.
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 750 of file HexExp.cpp.
References Nektar::LibUtilities::eHexahedron.
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1948 of file HexExp.cpp.
References m_staticCondMatrixManager.
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 756 of file HexExp.cpp.
References ASSERTL0, ASSERTL1, Nektar::StdRegions::StdExpansion::BwdTrans(), Nektar::LibUtilities::eGaussLobattoLegendre, Nektar::LibUtilities::eGLL_Lagrange, Nektar::LibUtilities::eModified_A, Nektar::StdRegions::StdExpansion::FwdTrans(), Nektar::StdRegions::StdExpansion::GetBasisType(), Nektar::StdRegions::StdExpansion::GetNcoeffs(), Nektar::StdRegions::StdExpansion::GetTotPoints(), Nektar::LibUtilities::Interp3D(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, Vmath::Vcopy(), and Vmath::Zero().
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Forward transform from physical quadrature space stored in inarray and evaluate the expansion coefficients and store in (this)->_coeffs.
inarray | Input array |
outarray | Output array |
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 325 of file HexExp.cpp.
References Nektar::StdRegions::StdExpansion::DetShapeType(), Nektar::StdRegions::eInvMass, Nektar::eWrapper, Nektar::StdRegions::StdExpansion::GetNcoeffs(), Nektar::StdRegions::StdExpansion::IProductWRTBase(), Nektar::StdRegions::StdExpansion::m_base, m_matrixManager, Nektar::StdRegions::StdExpansion::m_ncoeffs, and Vmath::Vcopy().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1325 of file HexExp.cpp.
References Blas::Dgemv(), Nektar::LocalRegions::Expansion::GetLocMatrix(), Nektar::StdRegions::StdExpansion::m_ncoeffs, and Vmath::Vcopy().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1485 of file HexExp.cpp.
References Nektar::StdRegions::eHybridDGHelmBndLam, Nektar::StdRegions::eHybridDGHelmholtz, Nektar::StdRegions::eHybridDGLamToQ0, Nektar::StdRegions::eHybridDGLamToQ1, Nektar::StdRegions::eHybridDGLamToQ2, Nektar::StdRegions::eHybridDGLamToU, Nektar::StdRegions::eInvLaplacianWithUnityMean, Nektar::StdRegions::StdMatrixKey::GetMatrixType(), and Nektar::LocalRegions::Expansion3D::v_GenMatrix().
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Retrieves the physical coordinates of a given set of reference coordinates.
Lcoords | Local coordinates in reference space. |
coords | Corresponding coordinates in physical space. |
Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 718 of file HexExp.cpp.
References ASSERTL1, and Nektar::LocalRegions::Expansion::m_geom.
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 737 of file HexExp.cpp.
References Nektar::LocalRegions::Expansion::v_GetCoords().
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Definition at line 867 of file HexExp.cpp.
References Nektar::StdRegions::eDir1BwdDir1_Dir2BwdDir2, Nektar::StdRegions::eDir1BwdDir2_Dir2FwdDir1, Nektar::StdRegions::eDir1FwdDir1_Dir2FwdDir2, Nektar::StdRegions::eDir1FwdDir2_Dir2BwdDir1, and Nektar::LocalRegions::Expansion3D::GetGeom3D().
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 698 of file HexExp.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::StdRegions::StdExpansion::GetBasisType(), and Nektar::StdRegions::StdExpansion::m_base.
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 1936 of file HexExp.cpp.
References m_matrixManager.
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1942 of file HexExp.cpp.
References m_staticCondMatrixManager.
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 689 of file HexExp.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), and Nektar::StdRegions::StdExpansion::m_base.
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Reimplemented from Nektar::LocalRegions::Expansion.
Definition at line 877 of file HexExp.cpp.
References ASSERTL0, and Nektar::StdRegions::StdExpansion::m_base.
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1316 of file HexExp.cpp.
References Nektar::StdRegions::StdExpansion3D::v_HelmholtzMatrixOp_MatFree().
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Integrate the physical point list inarray over region.
@param inarray definition of function to be returned at quadrature points of expansion. @returns \f$\int^1_{-1}\int^1_{-1} \int^1_{-1} u(\eta_1, \eta_2, \eta_3) J[i,j,k] d \eta_1 d \eta_2 d \eta_3 \f$ where \f$inarray[i,j,k] = u(\eta_{1i},\eta_{2j},\eta_{3k}) \f$ and \f$ J[i,j,k] \f$ is the Jacobian evaluated at the quadrature point.
Reimplemented from Nektar::StdRegions::StdExpansion3D.
Definition at line 117 of file HexExp.cpp.
References Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metricinfo, Vmath::Smul(), and Vmath::Vmul().
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Calculate the inner product of inarray with respect to the elements basis.
@param inarray Input array of physical space data. @param outarray Output array of data.
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 363 of file HexExp.cpp.
References v_IProductWRTBase_SumFac().
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Calculate the inner product of inarray with respect to the given basis B = base0 * base1 * base2.
\f$ \begin{array}{rcl} I_{pqr} = (\phi_{pqr}, u)_{\delta} & = & \sum_{i=0}^{nq_0} \sum_{j=0}^{nq_1} \sum_{k=0}^{nq_2} \psi_{p}^{a} (\xi_{1i}) \psi_{q}^{a} (\xi_{2j}) \psi_{r}^{a} (\xi_{3k}) w_i w_j w_k u(\xi_{1,i} \xi_{2,j} \xi_{3,k}) J_{i,j,k}\\ & = & \sum_{i=0}^{nq_0} \psi_p^a(\xi_{1,i}) \sum_{j=0}^{nq_1} \psi_{q}^a(\xi_{2,j}) \sum_{k=0}^{nq_2} \psi_{r}^a u(\xi_{1i},\xi_{2j},\xi_{3k}) J_{i,j,k} \end{array} \f$ \n where \f$ \phi_{pqr} (\xi_1 , \xi_2 , \xi_3) = \psi_p^a ( \xi_1) \psi_{q}^a (\xi_2) \psi_{r}^a (\xi_3) \f$ \n which can be implemented as \n \f$f_{r} (\xi_{3k}) = \sum_{k=0}^{nq_3} \psi_{r}^a u(\xi_{1i},\xi_{2j},\xi_{3k}) J_{i,j,k} = {\bf B_3 U} \f$ \n \f$ g_{q} (\xi_{3k}) = \sum_{j=0}^{nq_1} \psi_{q}^a (\xi_{2j}) f_{r} (\xi_{3k}) = {\bf B_2 F} \f$ \n \f$ (\phi_{pqr}, u)_{\delta} = \sum_{k=0}^{nq_0} \psi_{p}^a (\xi_{3k}) g_{q} (\xi_{3k}) = {\bf B_1 G} \f$ @param base0 Basis to integrate wrt in first dimension. @param base1 Basis to integrate wrt in second dimension. @param base2 Basis to integrate wrt in third dimension. @param inarray Input array. @param outarray Output array. @param coll_check (not used)
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 402 of file HexExp.cpp.
References Nektar::StdRegions::StdExpansion3D::IProductWRTBase_SumFacKernel(), Nektar::StdRegions::StdExpansion::m_base, and Nektar::StdRegions::StdExpansion::MultiplyByQuadratureMetric().
Referenced by v_IProductWRTBase().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 438 of file HexExp.cpp.
References IProductWRTDerivBase_SumFac().
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 141 of file HexExp.h.
References IProductWRTDirectionalDerivBase_SumFac().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1270 of file HexExp.cpp.
References Nektar::StdRegions::StdExpansion3D::v_LaplacianMatrixOp_MatFree().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1278 of file HexExp.cpp.
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1953 of file HexExp.cpp.
References ASSERTL1, Nektar::LocalRegions::Expansion::ComputeLaplacianMetric(), Nektar::LocalRegions::eMetricLaplacian00, Nektar::LocalRegions::eMetricLaplacian01, Nektar::LocalRegions::eMetricLaplacian02, Nektar::LocalRegions::eMetricLaplacian11, Nektar::LocalRegions::eMetricLaplacian12, Nektar::LocalRegions::eMetricLaplacian22, Nektar::StdRegions::StdExpansion3D::IProductWRTBase_SumFacKernel(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metrics, Nektar::StdRegions::StdExpansion::m_ncoeffs, Vmath::Vadd(), Vmath::Vvtvp(), and Vmath::Vvtvvtp().
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1307 of file HexExp.cpp.
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1262 of file HexExp.cpp.
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Calculate the derivative of the physical points.
For Hexahedral region can use the Tensor_Deriv function defined under StdExpansion. @param inarray Input array @param out_d0 Derivative of \a inarray in first direction. @param out_d1 Derivative of \a inarray in second direction. @param out_d2 Derivative of \a inarray in third direction.
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 160 of file HexExp.cpp.
References Blas::Daxpy(), Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metricinfo, Vmath::Smul(), Vmath::Vmul(), and Vmath::Vvtvp().
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Calculate the derivative of the physical points in a single direction.
dir | Direction in which to compute derivative. Valid values are 0, 1, 2. |
inarray | Input array. |
outarray | Output array. |
Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 243 of file HexExp.cpp.
References ASSERTL1, Nektar::NullNekDouble1DArray, and Nektar::StdRegions::StdExpansion::PhysDeriv().
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Physical derivative along a direction vector.
Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 277 of file HexExp.cpp.
References Nektar::LocalRegions::Expansion::ComputeGmatcdotMF(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::m_base, Nektar::LocalRegions::Expansion::m_metricinfo, Vmath::Vmul(), and Vmath::Vvtvp().
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This function evaluates the expansion at a single (arbitrary) point of the domain.
Based on the value of the expansion at the quadrature points, this function calculates the value of the expansion at an arbitrary single points (with coordinates \( \mathbf{x_c}\) given by the pointer coords). This operation, equivalent to
\[ u(\mathbf{x_c}) = \sum_p \phi_p(\mathbf{x_c}) \hat{u}_p \]
is evaluated using Lagrangian interpolants through the quadrature points:
\[ u(\mathbf{x_c}) = \sum_p h_p(\mathbf{x_c}) u_p\]
This function requires that the physical value array \(\mathbf{u}\) (implemented as the attribute #phys) is set.
coords | the coordinates of the single point |
Reimplemented from Nektar::StdRegions::StdExpansion3D.
Definition at line 678 of file HexExp.cpp.
References ASSERTL0, and Nektar::LocalRegions::Expansion::m_geom.
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This function is used to compute exactly the advective numerical flux on the interface of two elements with different expansions, hence an appropriate number of Gauss points has to be used. The number of Gauss points has to be equal to the number used by the highest polynomial degree of the two adjacent elements
numMin | Is the reduced polynomial order |
inarray | Input array of coefficients |
dumpVar | Output array of reduced coefficients. |
Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1384 of file HexExp.cpp.
References Nektar::LibUtilities::eGaussLobattoLegendre, Nektar::LibUtilities::eOrtho_A, Nektar::StdRegions::StdExpansion::GetBasisType(), Nektar::LibUtilities::InterpCoeff3D(), Nektar::StdRegions::StdExpansion::m_base, Vmath::Vcopy(), and Vmath::Zero().
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Given the local cartesian coordinate Lcoord evaluate the value of physvals at this point by calling through to the StdExpansion method
Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 670 of file HexExp.cpp.
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1453 of file HexExp.cpp.
References Nektar::SpatialDomains::eDeformed, Vmath::Fill(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::GetTotPoints(), Nektar::LocalRegions::Expansion::m_metricinfo, tinysimd::sqrt(), Vmath::Vdiv(), Vmath::Vmul(), and Vmath::Vsqrt().
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Reimplemented from Nektar::StdRegions::StdHexExp.
Definition at line 1289 of file HexExp.cpp.
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Reimplemented from Nektar::StdRegions::StdExpansion.
Definition at line 1298 of file HexExp.cpp.
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Definition at line 288 of file HexExp.h.
Referenced by CreateMatrix(), IProductWRTDerivBase_MatOp(), v_FwdTrans(), and v_GetLocMatrix().
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Definition at line 289 of file HexExp.h.
Referenced by v_DropLocStaticCondMatrix(), and v_GetLocStaticCondMatrix().