Nektar++
Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
Nektar::LocalRegions::Expansion Class Reference

#include <Expansion.h>

Inheritance diagram for Nektar::LocalRegions::Expansion:
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Public Member Functions

 Expansion (SpatialDomains::GeometrySharedPtr pGeom)
 
 Expansion (const Expansion &pSrc)
 
virtual ~Expansion ()
 
void SetTraceExp (const int traceid, ExpansionSharedPtr &f)
 
ExpansionSharedPtr GetTraceExp (const int traceid)
 
DNekScalMatSharedPtr GetLocMatrix (const LocalRegions::MatrixKey &mkey)
 
void DropLocMatrix (const LocalRegions::MatrixKey &mkey)
 
DNekScalMatSharedPtr GetLocMatrix (const StdRegions::MatrixType mtype, const StdRegions::ConstFactorMap &factors=StdRegions::NullConstFactorMap, const StdRegions::VarCoeffMap &varcoeffs=StdRegions::NullVarCoeffMap)
 
SpatialDomains::GeometrySharedPtr GetGeom () const
 
void Reset ()
 
IndexMapValuesSharedPtr CreateIndexMap (const IndexMapKey &ikey)
 
DNekScalBlkMatSharedPtr CreateStaticCondMatrix (const MatrixKey &mkey)
 
const SpatialDomains::GeomFactorsSharedPtrGetMetricInfo () const
 
DNekMatSharedPtr BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType)
 
DNekMatSharedPtr BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd)
 
void ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType)
 
void AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
void AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
void AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
void DGDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble >> &coeffs, Array< OneD, NekDouble > &outarray)
 
NekDouble VectorFlux (const Array< OneD, Array< OneD, NekDouble >> &vec)
 
void NormalTraceDerivFactors (Array< OneD, Array< OneD, NekDouble >> &factors, Array< OneD, Array< OneD, NekDouble >> &d0factors, Array< OneD, Array< OneD, NekDouble >> &d1factors)
 
IndexMapValuesSharedPtr GetIndexMap (const IndexMapKey &ikey)
 
void AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble >> &outarray)
 
ExpansionSharedPtr GetLeftAdjacentElementExp () const
 
ExpansionSharedPtr GetRightAdjacentElementExp () const
 
int GetLeftAdjacentElementTrace () const
 
int GetRightAdjacentElementTrace () const
 
void SetAdjacentElementExp (int traceid, ExpansionSharedPtr &e)
 
StdRegions::Orientation GetTraceOrient (int trace)
 
void SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 Divided by the metric jacobi and quadrature weights. More...
 
void GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray)
 Extract the metric factors to compute the contravariant fluxes along edge edge and stores them into outarray following the local edge orientation (i.e. anticlockwise convention). More...
 
void GetTracePhysVals (const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient=StdRegions::eNoOrientation)
 
void GetTracePhysMap (const int edge, Array< OneD, int > &outarray)
 
void ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1)
 
const NormalVectorGetTraceNormal (const int id)
 
void ComputeTraceNormal (const int id)
 
const Array< OneD, const NekDouble > & GetPhysNormals (void)
 
void SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
void SetUpPhysNormals (const int trace)
 
void AddRobinMassMatrix (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
 
void TraceNormLen (const int traceid, NekDouble &h, NekDouble &p)
 
void AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
 
const Array< OneD, const NekDouble > & GetElmtBndNormDirElmtLen (const int nbnd) const
 
void StdDerivBaseOnTraceMat (Array< OneD, DNekMatSharedPtr > &DerivMat)
 
- Public Member Functions inherited from Nektar::StdRegions::StdExpansion
 StdExpansion ()
 Default Constructor. More...
 
 StdExpansion (const int numcoeffs, const int numbases, const LibUtilities::BasisKey &Ba=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bb=LibUtilities::NullBasisKey, const LibUtilities::BasisKey &Bc=LibUtilities::NullBasisKey)
 Constructor. More...
 
 StdExpansion (const StdExpansion &T)
 Copy Constructor. More...
 
virtual ~StdExpansion ()
 Destructor. More...
 
int GetNumBases () const
 This function returns the number of 1D bases used in the expansion. More...
 
const Array< OneD, const LibUtilities::BasisSharedPtr > & GetBase () const
 This function gets the shared point to basis. More...
 
const LibUtilities::BasisSharedPtrGetBasis (int dir) const
 This function gets the shared point to basis in the dir direction. More...
 
int GetNcoeffs (void) const
 This function returns the total number of coefficients used in the expansion. More...
 
int GetTotPoints () const
 This function returns the total number of quadrature points used in the element. More...
 
LibUtilities::BasisType GetBasisType (const int dir) const
 This function returns the type of basis used in the dir direction. More...
 
int GetBasisNumModes (const int dir) const
 This function returns the number of expansion modes in the dir direction. More...
 
int EvalBasisNumModesMax (void) const
 This function returns the maximum number of expansion modes over all local directions. More...
 
LibUtilities::PointsType GetPointsType (const int dir) const
 This function returns the type of quadrature points used in the dir direction. More...
 
int GetNumPoints (const int dir) const
 This function returns the number of quadrature points in the dir direction. More...
 
const Array< OneD, const NekDouble > & GetPoints (const int dir) const
 This function returns a pointer to the array containing the quadrature points in dir direction. More...
 
int GetNverts () const
 This function returns the number of vertices of the expansion domain. More...
 
int GetTraceNcoeffs (const int i) const
 This function returns the number of expansion coefficients belonging to the i-th trace. More...
 
int GetTraceIntNcoeffs (const int i) const
 
int GetTraceNumPoints (const int i) const
 This function returns the number of quadrature points belonging to the i-th trace. More...
 
const LibUtilities::BasisKey GetTraceBasisKey (const int i, int k=-1) const
 This function returns the basis key belonging to the i-th trace. More...
 
LibUtilities::PointsKey GetTracePointsKey (const int i, int k=-1) const
 This function returns the basis key belonging to the i-th trace. More...
 
int NumBndryCoeffs (void) const
 
int NumDGBndryCoeffs (void) const
 
const LibUtilities::PointsKey GetNodalPointsKey () const
 This function returns the type of expansion Nodal point type if defined. More...
 
int GetNtraces () const
 Returns the number of trace elements connected to this element. More...
 
LibUtilities::ShapeType DetShapeType () const
 This function returns the shape of the expansion domain. More...
 
std::shared_ptr< StdExpansionGetStdExp () const
 
std::shared_ptr< StdExpansionGetLinStdExp (void) const
 
int GetShapeDimension () const
 
bool IsBoundaryInteriorExpansion () const
 
bool IsNodalNonTensorialExp ()
 
void BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Backward transformation from coefficient space to physical space. More...
 
void FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs the Forward transformation from physical space to coefficient space. More...
 
void FwdTransBndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
NekDouble Integral (const Array< OneD, const NekDouble > &inarray)
 This function integrates the specified function over the domain. More...
 
void FillMode (const int mode, Array< OneD, NekDouble > &outarray)
 This function fills the array outarray with the mode-th mode of the expansion. More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 this function calculates the inner product of a given function f with the different modes of the expansion More...
 
void IProductWRTBase (const Array< OneD, const NekDouble > &base, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int coll_check)
 
void IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
int GetElmtId ()
 Get the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void SetElmtId (const int id)
 Set the element id of this expansion when used in a list by returning value of m_elmt_id. More...
 
void GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2=NullNekDouble1DArray, Array< OneD, NekDouble > &coords_3=NullNekDouble1DArray)
 this function returns the physical coordinates of the quadrature points of the expansion More...
 
void GetCoord (const Array< OneD, const NekDouble > &Lcoord, Array< OneD, NekDouble > &coord)
 given the coordinates of a point of the element in the local collapsed coordinate system, this function calculates the physical coordinates of the point More...
 
DNekMatSharedPtr GetStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr GetStdStaticCondMatrix (const StdMatrixKey &mkey)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
void NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble >> &Fvec, Array< OneD, NekDouble > &outarray)
 
DNekScalBlkMatSharedPtr GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
void DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
int CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
NekDouble StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 
int GetCoordim ()
 
void GetBoundaryMap (Array< OneD, unsigned int > &outarray)
 
void GetInteriorMap (Array< OneD, unsigned int > &outarray)
 
int GetVertexMap (const int localVertexId, bool useCoeffPacking=false)
 
void GetTraceToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1)
 
void GetTraceCoeffMap (const unsigned int traceid, Array< OneD, unsigned int > &maparray)
 
void GetElmtTraceToTraceMap (const unsigned int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1)
 
void GetTraceInteriorToElementMap (const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, const Orientation traceOrient=eForwards)
 
void GetTraceNumModes (const int tid, int &numModes0, int &numModes1, const Orientation traceOrient=eDir1FwdDir1_Dir2FwdDir2)
 
void MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
DNekMatSharedPtr CreateGeneralMatrix (const StdMatrixKey &mkey)
 this function generates the mass matrix \(\mathbf{M}[i][j] = \int \phi_i(\mathbf{x}) \phi_j(\mathbf{x}) d\mathbf{x}\) More...
 
void GeneralMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void ReduceOrderCoeffs (int numMin, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void SVVLaplacianFilter (Array< OneD, NekDouble > &array, const StdMatrixKey &mkey)
 
void ExponentialFilter (Array< OneD, NekDouble > &array, const NekDouble alpha, const NekDouble exponent, const NekDouble cutoff)
 
void LaplacianMatrixOp (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
DNekMatSharedPtr GenMatrix (const StdMatrixKey &mkey)
 
void PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void PhysDeriv_s (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_ds)
 
void PhysDeriv_n (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_dn)
 
void PhysDirectionalDeriv (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &direction, Array< OneD, NekDouble > &outarray)
 
void StdPhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
 
void StdPhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
NekDouble PhysEvaluate (const Array< OneD, const NekDouble > &coords, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluate (const Array< OneD, NekDouble > &coord, const Array< OneD, const NekDouble > &inarray, std::array< NekDouble, 3 > &firstOrderDerivs)
 This function evaluates the first derivative of the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluate (const Array< OneD, NekDouble > &coord, const Array< OneD, const NekDouble > &inarray, std::array< NekDouble, 3 > &firstOrderDerivs, std::array< NekDouble, 6 > &secondOrderDerivs)
 
NekDouble PhysEvaluate (const Array< OneD, DNekMatSharedPtr > &I, const Array< OneD, const NekDouble > &physvals)
 This function evaluates the expansion at a single (arbitrary) point of the domain. More...
 
NekDouble PhysEvaluateBasis (const Array< OneD, const NekDouble > &coords, int mode)
 This function evaluates the basis function mode mode at a point coords of the domain. More...
 
void LocCoordToLocCollapsed (const Array< OneD, const NekDouble > &xi, Array< OneD, NekDouble > &eta)
 Convert local cartesian coordinate xi into local collapsed coordinates eta. More...
 
void LocCollapsedToLocCoord (const Array< OneD, const NekDouble > &eta, Array< OneD, NekDouble > &xi)
 Convert local collapsed coordinates eta into local cartesian coordinate xi. More...
 
virtual int v_CalcNumberOfCoefficients (const std::vector< unsigned int > &nummodes, int &modes_offset)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, const Array< OneD, const NekDouble > &Fz, Array< OneD, NekDouble > &outarray)
 
virtual void v_NormVectorIProductWRTBase (const Array< OneD, const Array< OneD, NekDouble >> &Fvec, Array< OneD, NekDouble > &outarray)
 
virtual DNekScalBlkMatSharedPtr v_GetLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual void v_DropLocStaticCondMatrix (const LocalRegions::MatrixKey &mkey)
 
NekDouble Linf (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_\infty\) error \( |\epsilon|_\infty = \max |u - u_{exact}|\) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble L2 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( L_2\) error, \( | \epsilon |_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
NekDouble H1 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &sol=NullNekDouble1DArray)
 Function to evaluate the discrete \( H^1\) error, \( | \epsilon |^1_{2} = \left [ \int^1_{-1} [u - u_{exact}]^2 + \nabla(u - u_{exact})\cdot\nabla(u - u_{exact})\cdot dx \right]^{1/2} d\xi_1 \) where \( u_{exact}\) is given by the array sol. More...
 
const LibUtilities::PointsKeyVector GetPointsKeys () const
 
DNekMatSharedPtr BuildInverseTransformationMatrix (const DNekScalMatSharedPtr &m_transformationmatrix)
 
void PhysInterpToSimplexEquiSpaced (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, int npset=-1)
 This function performs an interpolation from the physical space points provided at input into an array of equispaced points which are not the collapsed coordinate. So for a tetrahedron you will only get a tetrahedral number of values. More...
 
void GetSimplexEquiSpacedConnectivity (Array< OneD, int > &conn, bool standard=true)
 This function provides the connectivity of local simplices (triangles or tets) to connect the equispaced data points provided by PhysInterpToSimplexEquiSpaced. More...
 
void EquiSpacedToCoeffs (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 This function performs a projection/interpolation from the equispaced points sometimes used in post-processing onto the coefficient space. More...
 
template<class T >
std::shared_ptr< T > as ()
 
void IProductWRTBase_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, bool multiplybyweights=true)
 
void GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat)
 

Protected Member Functions

void ComputeLaplacianMetric ()
 
void ComputeQuadratureMetric ()
 
void ComputeGmatcdotMF (const Array< TwoD, const NekDouble > &df, const Array< OneD, const NekDouble > &direction, Array< OneD, Array< OneD, NekDouble >> &dfdir)
 
Array< OneD, NekDoubleGetMF (const int dir, const int shapedim, const StdRegions::VarCoeffMap &varcoeffs)
 
Array< OneD, NekDoubleGetMFDiv (const int dir, const StdRegions::VarCoeffMap &varcoeffs)
 
Array< OneD, NekDoubleGetMFMag (const int dir, const StdRegions::VarCoeffMap &varcoeffs)
 
virtual void v_MultiplyByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
 
virtual void v_DivideByQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
virtual void v_ComputeLaplacianMetric ()
 
virtual int v_GetCoordim () const override
 
virtual void v_GetCoords (Array< OneD, NekDouble > &coords_1, Array< OneD, NekDouble > &coords_2, Array< OneD, NekDouble > &coords_3) override
 
virtual DNekScalMatSharedPtr v_GetLocMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual void v_DropLocMatrix (const LocalRegions::MatrixKey &mkey)
 
virtual DNekMatSharedPtr v_BuildTransformationMatrix (const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType)
 
virtual DNekMatSharedPtr v_BuildVertexMatrix (const DNekScalMatSharedPtr &r_bnd)
 
virtual void v_ExtractDataToCoeffs (const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType)
 
virtual void v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
 
virtual void v_AddEdgeNormBoundaryInt (const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
virtual void v_AddFaceNormBoundaryInt (const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
 
virtual void v_DGDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble >> &coeffs, Array< OneD, NekDouble > &outarray)
 
virtual NekDouble v_VectorFlux (const Array< OneD, Array< OneD, NekDouble >> &vec)
 
virtual void v_NormalTraceDerivFactors (Array< OneD, Array< OneD, NekDouble >> &factors, Array< OneD, Array< OneD, NekDouble >> &d0factors, Array< OneD, Array< OneD, NekDouble >> &d1factors)
 
virtual void v_AlignVectorToCollapsedDir (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble >> &outarray)
 
virtual StdRegions::Orientation v_GetTraceOrient (int trace)
 
virtual void v_SetCoeffsToOrientation (StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
 
virtual void v_GetTraceQFactors (const int trace, Array< OneD, NekDouble > &outarray)
 
virtual void v_GetTracePhysVals (const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient)
 
virtual void v_GetTracePhysMap (const int edge, Array< OneD, int > &outarray)
 
virtual void v_ReOrientTracePhysMap (const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1=-1)
 
virtual void v_ComputeTraceNormal (const int id)
 
virtual const Array< OneD, const NekDouble > & v_GetPhysNormals ()
 
virtual void v_SetPhysNormals (Array< OneD, const NekDouble > &normal)
 
virtual void v_SetUpPhysNormals (const int id)
 
virtual void v_AddRobinMassMatrix (const int face, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
 
virtual void v_AddRobinTraceContribution (const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
 
virtual void v_TraceNormLen (const int traceid, NekDouble &h, NekDouble &p)
 
virtual void v_GenTraceExp (const int traceid, ExpansionSharedPtr &exp)
 
- Protected Member Functions inherited from Nektar::StdRegions::StdExpansion
DNekMatSharedPtr CreateStdMatrix (const StdMatrixKey &mkey)
 
DNekBlkMatSharedPtr CreateStdStaticCondMatrix (const StdMatrixKey &mkey)
 Create the static condensation of a matrix when using a boundary interior decomposition. More...
 
void BwdTrans_SumFac (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDerivBase_SumFac (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void IProductWRTDirectionalDerivBase_SumFac (const Array< OneD, const NekDouble > &direction, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
void GeneralMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree_Kernel (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, Array< OneD, NekDouble > &wsp)
 
void LaplacianMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LaplacianMatrixOp_MatFree (const int k1, const int k2, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDerivMatrixOp_MatFree (const int i, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void WeakDirectionalDerivMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void MassLevelCurvatureMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void LinearAdvectionDiffusionReactionMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey, bool addDiffusionTerm=true)
 
void HelmholtzMatrixOp_MatFree (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
void HelmholtzMatrixOp_MatFree_GenericImpl (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const StdMatrixKey &mkey)
 
virtual void v_SetCoeffsToOrientation (Array< OneD, NekDouble > &coeffs, StdRegions::Orientation dir)
 
virtual NekDouble v_StdPhysEvaluate (const Array< OneD, const NekDouble > &Lcoord, const Array< OneD, const NekDouble > &physvals)
 
virtual void v_GenStdMatBwdDeriv (const int dir, DNekMatSharedPtr &mat)
 
virtual void v_MultiplyByStdQuadratureMetric (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
 
template<int DIR, bool DERIV = false, bool DERIV2 = false>
NekDouble BaryEvaluate (const NekDouble &coord, const NekDouble *physvals, NekDouble &deriv, NekDouble &deriv2)
 This function performs the barycentric interpolation of the polynomial stored in coord at a point physvals using barycentric interpolation weights in direction. More...
 
template<int DIR>
NekDouble BaryEvaluateBasis (const NekDouble &coord, const int &mode)
 
template<int DIR, bool DERIV = false, bool DERIV2 = false>
NekDouble BaryEvaluate (const NekDouble &coord, const NekDouble *physvals)
 Helper function to pass an unused value by reference into BaryEvaluate. More...
 
template<int DIR, bool DERIV = false, bool DERIV2 = false>
NekDouble BaryEvaluate (const NekDouble &coord, const NekDouble *physvals, NekDouble &deriv)
 

Protected Attributes

LibUtilities::NekManager< IndexMapKey, IndexMapValues, IndexMapKey::opLessm_indexMapManager
 
std::map< int, ExpansionWeakPtrm_traceExp
 
SpatialDomains::GeometrySharedPtr m_geom
 
SpatialDomains::GeomFactorsSharedPtr m_metricinfo
 
MetricMap m_metrics
 
std::map< int, NormalVectorm_traceNormals
 
ExpansionWeakPtr m_elementLeft
 
ExpansionWeakPtr m_elementRight
 
int m_elementTraceLeft = -1
 
int m_elementTraceRight = -1
 
std::map< int, Array< OneD, NekDouble > > m_elmtBndNormDirElmtLen
 the element length in each element boundary(Vertex, edge or face) normal direction calculated based on the local m_metricinfo times the standard element length (which is 2.0) More...
 
- Protected Attributes inherited from Nektar::StdRegions::StdExpansion
Array< OneD, LibUtilities::BasisSharedPtrm_base
 
int m_elmt_id
 
int m_ncoeffs
 
LibUtilities::NekManager< StdMatrixKey, DNekMat, StdMatrixKey::opLessm_stdMatrixManager
 
LibUtilities::NekManager< StdMatrixKey, DNekBlkMat, StdMatrixKey::opLessm_stdStaticCondMatrixManager
 

Detailed Description

Definition at line 73 of file Expansion.h.

Constructor & Destructor Documentation

◆ Expansion() [1/2]

Nektar::LocalRegions::Expansion::Expansion ( SpatialDomains::GeometrySharedPtr  pGeom)

Definition at line 47 of file Expansion.cpp.

49  std::bind(&Expansion::CreateIndexMap, this, std::placeholders::_1),
50  std::string("ExpansionIndexMap")),
51  m_geom(pGeom), m_metricinfo(m_geom->GetGeomFactors()),
53 {
54  if (!m_metricinfo)
55  {
56  return;
57  }
58 
59  if (!m_metricinfo->IsValid())
60  {
61  int nDim = m_base.size();
62  string type = "regular";
63  if (m_metricinfo->GetGtype() == SpatialDomains::eDeformed)
64  {
65  type = "deformed";
66  }
67 
68  stringstream err;
69  err << nDim << "D " << type << " Jacobian not positive "
70  << "(element ID = " << m_geom->GetGlobalID() << ") "
71  << "(first vertex ID = " << m_geom->GetVid(0) << ")";
72  NEKERROR(ErrorUtil::ewarning, err.str());
73  }
74 
75  m_traceExp.empty();
76 }
#define NEKERROR(type, msg)
Assert Level 0 – Fundamental assert which is used whether in FULLDEBUG, DEBUG or OPT compilation mode...
Definition: ErrorUtil.hpp:209
IndexMapValuesSharedPtr CreateIndexMap(const IndexMapKey &ikey)
Definition: Expansion.cpp:185
SpatialDomains::GeometrySharedPtr m_geom
Definition: Expansion.h:275
std::map< int, ExpansionWeakPtr > m_traceExp
Definition: Expansion.h:274
SpatialDomains::GeomFactorsSharedPtr m_metricinfo
Definition: Expansion.h:276
LibUtilities::NekManager< IndexMapKey, IndexMapValues, IndexMapKey::opLess > m_indexMapManager
Definition: Expansion.h:272
Array< OneD, LibUtilities::BasisSharedPtr > m_base
@ eDeformed
Geometry is curved or has non-constant factors.

References Nektar::SpatialDomains::eDeformed, Nektar::ErrorUtil::ewarning, Nektar::StdRegions::StdExpansion::m_base, m_geom, m_metricinfo, m_traceExp, and NEKERROR.

◆ Expansion() [2/2]

Nektar::LocalRegions::Expansion::Expansion ( const Expansion pSrc)

Definition at line 78 of file Expansion.cpp.

79  : StdExpansion(pSrc), m_indexMapManager(pSrc.m_indexMapManager),
80  m_geom(pSrc.m_geom), m_metricinfo(pSrc.m_metricinfo)
81 {
82 }
StdExpansion()
Default Constructor.

◆ ~Expansion()

Nektar::LocalRegions::Expansion::~Expansion ( )
virtual

Definition at line 84 of file Expansion.cpp.

85 {
86 }

Member Function Documentation

◆ AddEdgeNormBoundaryInt() [1/2]

void Nektar::LocalRegions::Expansion::AddEdgeNormBoundaryInt ( const int  edge,
const std::shared_ptr< Expansion > &  EdgeExp,
const Array< OneD, const NekDouble > &  Fn,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 126 of file Expansion.cpp.

129 {
130  v_AddEdgeNormBoundaryInt(edge, EdgeExp, Fn, outarray);
131 }
virtual void v_AddEdgeNormBoundaryInt(const int edge, const std::shared_ptr< Expansion > &EdgeExp, const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray)
Definition: Expansion.cpp:761

References v_AddEdgeNormBoundaryInt().

◆ AddEdgeNormBoundaryInt() [2/2]

void Nektar::LocalRegions::Expansion::AddEdgeNormBoundaryInt ( const int  edge,
const std::shared_ptr< Expansion > &  EdgeExp,
const Array< OneD, const NekDouble > &  Fx,
const Array< OneD, const NekDouble > &  Fy,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 118 of file Expansion.cpp.

122 {
123  v_AddEdgeNormBoundaryInt(edge, EdgeExp, Fx, Fy, outarray);
124 }

References v_AddEdgeNormBoundaryInt().

Referenced by Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt().

◆ AddFaceNormBoundaryInt()

void Nektar::LocalRegions::Expansion::AddFaceNormBoundaryInt ( const int  face,
const std::shared_ptr< Expansion > &  FaceExp,
const Array< OneD, const NekDouble > &  Fn,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 133 of file Expansion.cpp.

136 {
137  v_AddFaceNormBoundaryInt(face, FaceExp, Fn, outarray);
138 }
virtual void v_AddFaceNormBoundaryInt(const int face, const std::shared_ptr< Expansion > &FaceExp, const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray)
Definition: Expansion.cpp:778

References v_AddFaceNormBoundaryInt().

◆ AddRobinMassMatrix()

void Nektar::LocalRegions::Expansion::AddRobinMassMatrix ( const int  traceid,
const Array< OneD, const NekDouble > &  primCoeffs,
DNekMatSharedPtr inoutmat 
)
inline

Definition at line 245 of file Expansion.h.

248  {
249  v_AddRobinMassMatrix(traceid, primCoeffs, inoutmat);
250  }
virtual void v_AddRobinMassMatrix(const int face, const Array< OneD, const NekDouble > &primCoeffs, DNekMatSharedPtr &inoutmat)
Definition: Expansion.cpp:896

References v_AddRobinMassMatrix().

◆ AddRobinTraceContribution()

void Nektar::LocalRegions::Expansion::AddRobinTraceContribution ( const int  traceid,
const Array< OneD, const NekDouble > &  primCoeffs,
const Array< OneD, NekDouble > &  incoeffs,
Array< OneD, NekDouble > &  coeffs 
)
inline

Definition at line 257 of file Expansion.h.

260  {
261  v_AddRobinTraceContribution(traceid, primCoeffs, incoeffs, coeffs);
262  }
virtual void v_AddRobinTraceContribution(const int traceid, const Array< OneD, const NekDouble > &primCoeffs, const Array< OneD, NekDouble > &incoeffs, Array< OneD, NekDouble > &coeffs)
Definition: Expansion.cpp:904

References v_AddRobinTraceContribution().

◆ AlignVectorToCollapsedDir()

void Nektar::LocalRegions::Expansion::AlignVectorToCollapsedDir ( const int  dir,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, Array< OneD, NekDouble >> &  outarray 
)
inline

Definition at line 153 of file Expansion.h.

156  {
157  v_AlignVectorToCollapsedDir(dir, inarray, outarray);
158  }
virtual void v_AlignVectorToCollapsedDir(const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, Array< OneD, NekDouble >> &outarray)
Definition: Expansion.cpp:927

References v_AlignVectorToCollapsedDir().

Referenced by Nektar::LocalRegions::NodalTriExp::IProductWRTDerivBase_SumFac().

◆ BuildTransformationMatrix()

DNekMatSharedPtr Nektar::LocalRegions::Expansion::BuildTransformationMatrix ( const DNekScalMatSharedPtr r_bnd,
const StdRegions::MatrixType  matrixType 
)

Definition at line 99 of file Expansion.cpp.

101 {
102  return v_BuildTransformationMatrix(r_bnd, matrixType);
103 }
virtual DNekMatSharedPtr v_BuildTransformationMatrix(const DNekScalMatSharedPtr &r_bnd, const StdRegions::MatrixType matrixType)
Definition: Expansion.cpp:736

References v_BuildTransformationMatrix().

◆ BuildVertexMatrix()

DNekMatSharedPtr Nektar::LocalRegions::Expansion::BuildVertexMatrix ( const DNekScalMatSharedPtr r_bnd)

Definition at line 105 of file Expansion.cpp.

106 {
107  return v_BuildVertexMatrix(r_bnd);
108 }
virtual DNekMatSharedPtr v_BuildVertexMatrix(const DNekScalMatSharedPtr &r_bnd)
Definition: Expansion.cpp:744

References v_BuildVertexMatrix().

Referenced by Nektar::LocalRegions::Expansion2D::CreateMatrix().

◆ ComputeGmatcdotMF()

void Nektar::LocalRegions::Expansion::ComputeGmatcdotMF ( const Array< TwoD, const NekDouble > &  df,
const Array< OneD, const NekDouble > &  direction,
Array< OneD, Array< OneD, NekDouble >> &  dfdir 
)
protected

Definition at line 608 of file Expansion.cpp.

611 {
612  int shapedim = dfdir.size();
613  int coordim = GetCoordim();
614  int nqtot = direction.size() / coordim;
615 
616  for (int j = 0; j < shapedim; j++)
617  {
618  dfdir[j] = Array<OneD, NekDouble>(nqtot, 0.0);
619  for (int k = 0; k < coordim; k++)
620  {
621  if (m_metricinfo->GetGtype() == SpatialDomains::eDeformed)
622  {
623  Vmath::Vvtvp(nqtot, &df[shapedim * k + j][0], 1,
624  &direction[k * nqtot], 1, &dfdir[j][0], 1,
625  &dfdir[j][0], 1);
626  }
627  else
628  {
629  Vmath::Svtvp(nqtot, df[shapedim * k + j][0],
630  &direction[k * nqtot], 1, &dfdir[j][0], 1,
631  &dfdir[j][0], 1);
632  }
633  }
634  }
635 }
void Svtvp(int n, const T alpha, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
svtvp (scalar times vector plus vector): z = alpha*x + y
Definition: Vmath.cpp:622
void Vvtvp(int n, const T *w, const int incw, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
vvtvp (vector times vector plus vector): z = w*x + y
Definition: Vmath.cpp:574

References Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::StdExpansion::GetCoordim(), m_metricinfo, Vmath::Svtvp(), and Vmath::Vvtvp().

Referenced by Nektar::LocalRegions::Expansion2D::CreateMatrix(), Nektar::LocalRegions::HexExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDirectionalDerivBase_SumFac(), and Nektar::LocalRegions::HexExp::v_PhysDirectionalDeriv().

◆ ComputeLaplacianMetric()

void Nektar::LocalRegions::Expansion::ComputeLaplacianMetric ( )
protected

◆ ComputeQuadratureMetric()

void Nektar::LocalRegions::Expansion::ComputeQuadratureMetric ( )
protected

Definition at line 459 of file Expansion.cpp.

460 {
461  unsigned int nqtot = GetTotPoints();
462  SpatialDomains::GeomType type = m_metricinfo->GetGtype();
464  if (type == SpatialDomains::eRegular ||
466  {
468  Array<OneD, NekDouble>(nqtot, m_metricinfo->GetJac(p)[0]);
469  }
470  else
471  {
473  }
474 
477 }
int GetTotPoints() const
This function returns the total number of quadrature points used in the element.
Definition: StdExpansion.h:140
const LibUtilities::PointsKeyVector GetPointsKeys() const
virtual void v_MultiplyByStdQuadratureMetric(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
std::vector< PointsKey > PointsKeyVector
Definition: Points.h:250
GeomType
Indicates the type of element geometry.
@ eRegular
Geometry is straight-sided with constant geometric factors.
@ eMovingRegular
Currently unused.

References Nektar::LocalRegions::eMetricQuadrature, Nektar::SpatialDomains::eMovingRegular, Nektar::SpatialDomains::eRegular, Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::GetTotPoints(), m_metricinfo, m_metrics, CellMLToNektar.cellml_metadata::p, and Nektar::StdRegions::StdExpansion::v_MultiplyByStdQuadratureMetric().

Referenced by Nektar::LocalRegions::HexExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::QuadExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), v_DivideByQuadratureMetric(), and v_MultiplyByQuadratureMetric().

◆ ComputeTraceNormal()

void Nektar::LocalRegions::Expansion::ComputeTraceNormal ( const int  id)
inline

Definition at line 225 of file Expansion.h.

226  {
228  }
virtual void v_ComputeTraceNormal(const int id)
Definition: Expansion.cpp:872

References v_ComputeTraceNormal().

◆ CreateIndexMap()

IndexMapValuesSharedPtr Nektar::LocalRegions::Expansion::CreateIndexMap ( const IndexMapKey ikey)

Definition at line 185 of file Expansion.cpp.

186 {
187  IndexMapValuesSharedPtr returnval;
188 
189  IndexMapType itype = ikey.GetIndexMapType();
190 
191  int entity = ikey.GetIndexEntity();
192 
193  StdRegions::Orientation orient = ikey.GetIndexOrientation();
194 
195  Array<OneD, unsigned int> map;
196  Array<OneD, int> sign;
197 
198  switch (itype)
199  {
200  case eEdgeToElement:
201  {
202  GetTraceToElementMap(entity, map, sign, orient);
203  }
204  break;
205  case eFaceToElement:
206  {
207  GetTraceToElementMap(entity, map, sign, orient);
208  }
209  break;
210  case eEdgeInterior:
211  {
212  ASSERTL0(false, "Boundary Index Map not implemented yet.");
213  // v_GetEdgeInteriorMap(entity,orient,map,sign);
214  }
215  break;
216  case eFaceInterior:
217  {
218  ASSERTL0(false, "Boundary Index Map not implemented yet.");
219  // v_GetFaceInteriorMap(entity,orient,map,sign);
220  }
221  break;
222  case eBoundary:
223  {
224  ASSERTL0(false, "Boundary Index Map not implemented yet.");
225  }
226  break;
227  case eVertex:
228  {
229  ASSERTL0(false, "Vertex Index Map not implemented yet.");
230  }
231  break;
232  default:
233  {
234  ASSERTL0(false, "The Index Map you are requiring "
235  "is not between the possible options.");
236  }
237  }
238 
239  returnval = MemoryManager<IndexMapValues>::AllocateSharedPtr(map.size());
240 
241  for (int i = 0; i < map.size(); i++)
242  {
243  (*returnval)[i].index = map[i];
244  (*returnval)[i].sign = sign[i];
245  }
246 
247  return returnval;
248 }
#define ASSERTL0(condition, msg)
Definition: ErrorUtil.hpp:215
#define sign(a, b)
return the sign(b)*a
Definition: Polylib.cpp:49
static std::shared_ptr< DataType > AllocateSharedPtr(const Args &...args)
Allocate a shared pointer from the memory pool.
void GetTraceToElementMap(const int tid, Array< OneD, unsigned int > &maparray, Array< OneD, int > &signarray, Orientation traceOrient=eForwards, int P=-1, int Q=-1)
Definition: StdExpansion.h:690
std::shared_ptr< IndexMapValues > IndexMapValuesSharedPtr
Definition: IndexMapKey.h:128

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::LocalRegions::eBoundary, Nektar::LocalRegions::eEdgeInterior, Nektar::LocalRegions::eEdgeToElement, Nektar::LocalRegions::eFaceInterior, Nektar::LocalRegions::eFaceToElement, Nektar::LocalRegions::eVertex, Nektar::LocalRegions::IndexMapKey::GetIndexEntity(), Nektar::LocalRegions::IndexMapKey::GetIndexMapType(), Nektar::LocalRegions::IndexMapKey::GetIndexOrientation(), Nektar::StdRegions::StdExpansion::GetTraceToElementMap(), and sign.

◆ CreateStaticCondMatrix()

DNekScalBlkMatSharedPtr Nektar::LocalRegions::Expansion::CreateStaticCondMatrix ( const MatrixKey mkey)

Definition at line 277 of file Expansion.cpp.

278 {
279  DNekScalBlkMatSharedPtr returnval;
280 
282  "Geometric information is not set up");
283 
284  // set up block matrix system
285  unsigned int nbdry = NumBndryCoeffs();
286  unsigned int nint = (unsigned int)(m_ncoeffs - nbdry);
287  unsigned int exp_size[] = {nbdry, nint};
288  unsigned int nblks = 2;
290  nblks, nblks, exp_size, exp_size);
291  // Really need a constructor which takes Arrays
292  NekDouble factor = 1.0;
293 
294  switch (mkey.GetMatrixType())
295  {
296  // this can only use stdregions statically condensed system
297  // for mass matrix
298  case StdRegions::eMass:
299  if ((m_metricinfo->GetGtype() == SpatialDomains::eDeformed) ||
300  (mkey.GetNVarCoeff()))
301  {
302  factor = 1.0;
303  goto UseLocRegionsMatrix;
304  }
305  else
306  {
307  factor = (m_metricinfo->GetJac(GetPointsKeys()))[0];
308  goto UseStdRegionsMatrix;
309  }
310  break;
311  default: // use Deformed case for both
312  // regular and deformed geometries
313  factor = 1.0;
314  goto UseLocRegionsMatrix;
315  break;
316  UseStdRegionsMatrix:
317  {
318  NekDouble invfactor = 1.0 / factor;
319  NekDouble one = 1.0;
322  DNekMatSharedPtr Asubmat;
323 
324  returnval->SetBlock(
325  0, 0,
327  factor, Asubmat = mat->GetBlock(0, 0)));
328  returnval->SetBlock(
329  0, 1,
331  one, Asubmat = mat->GetBlock(0, 1)));
332  returnval->SetBlock(
333  1, 0,
335  factor, Asubmat = mat->GetBlock(1, 0)));
336  returnval->SetBlock(
337  1, 1,
339  invfactor, Asubmat = mat->GetBlock(1, 1)));
340  }
341  break;
342  UseLocRegionsMatrix:
343  {
344  int i, j;
345  NekDouble invfactor = 1.0 / factor;
346  NekDouble one = 1.0;
347  DNekScalMat &mat = *GetLocMatrix(mkey);
350  DNekMatSharedPtr B =
352  DNekMatSharedPtr C =
354  DNekMatSharedPtr D =
356 
357  Array<OneD, unsigned int> bmap(nbdry);
358  Array<OneD, unsigned int> imap(nint);
359  GetBoundaryMap(bmap);
360  GetInteriorMap(imap);
361 
362  for (i = 0; i < nbdry; ++i)
363  {
364  for (j = 0; j < nbdry; ++j)
365  {
366  (*A)(i, j) = mat(bmap[i], bmap[j]);
367  }
368 
369  for (j = 0; j < nint; ++j)
370  {
371  (*B)(i, j) = mat(bmap[i], imap[j]);
372  }
373  }
374 
375  for (i = 0; i < nint; ++i)
376  {
377  for (j = 0; j < nbdry; ++j)
378  {
379  (*C)(i, j) = mat(imap[i], bmap[j]);
380  }
381 
382  for (j = 0; j < nint; ++j)
383  {
384  (*D)(i, j) = mat(imap[i], imap[j]);
385  }
386  }
387 
388  // Calculate static condensed system
389  if (nint)
390  {
391  D->Invert();
392  (*B) = (*B) * (*D);
393  (*A) = (*A) - (*B) * (*C);
394  }
395 
397 
398  returnval->SetBlock(
399  0, 0,
400  Atmp =
402  returnval->SetBlock(
403  0, 1,
405  returnval->SetBlock(
406  1, 0,
407  Atmp =
409  returnval->SetBlock(
410  1, 1,
412  D));
413  }
414  }
415  return returnval;
416 }
#define ASSERTL2(condition, msg)
Assert Level 2 – Debugging which is used FULLDEBUG compilation mode. This level assert is designed to...
Definition: ErrorUtil.hpp:272
DNekScalMatSharedPtr GetLocMatrix(const LocalRegions::MatrixKey &mkey)
Definition: Expansion.cpp:88
void GetBoundaryMap(Array< OneD, unsigned int > &outarray)
Definition: StdExpansion.h:675
DNekBlkMatSharedPtr GetStdStaticCondMatrix(const StdMatrixKey &mkey)
Definition: StdExpansion.h:614
void GetInteriorMap(Array< OneD, unsigned int > &outarray)
Definition: StdExpansion.h:680
@ eNoGeomType
No type defined.
NekMatrix< NekMatrix< NekDouble, StandardMatrixTag >, ScaledMatrixTag > DNekScalMat
std::shared_ptr< DNekScalMat > DNekScalMatSharedPtr
std::shared_ptr< DNekBlkMat > DNekBlkMatSharedPtr
Definition: NekTypeDefs.hpp:77
std::shared_ptr< DNekScalBlkMat > DNekScalBlkMatSharedPtr
Definition: NekTypeDefs.hpp:79
std::shared_ptr< DNekMat > DNekMatSharedPtr
Definition: NekTypeDefs.hpp:75
double NekDouble

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL2, Nektar::SpatialDomains::eDeformed, Nektar::StdRegions::eMass, Nektar::SpatialDomains::eNoGeomType, Nektar::StdRegions::StdExpansion::GetBoundaryMap(), Nektar::StdRegions::StdExpansion::GetInteriorMap(), GetLocMatrix(), Nektar::StdRegions::StdMatrixKey::GetMatrixType(), Nektar::StdRegions::StdMatrixKey::GetNVarCoeff(), Nektar::StdRegions::StdExpansion::GetPointsKeys(), Nektar::StdRegions::StdExpansion::GetStdStaticCondMatrix(), m_metricinfo, Nektar::StdRegions::StdExpansion::m_ncoeffs, and Nektar::StdRegions::StdExpansion::NumBndryCoeffs().

◆ DGDeriv()

void Nektar::LocalRegions::Expansion::DGDeriv ( const int  dir,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, ExpansionSharedPtr > &  EdgeExp,
Array< OneD, Array< OneD, NekDouble >> &  coeffs,
Array< OneD, NekDouble > &  outarray 
)

Definition at line 140 of file Expansion.cpp.

145 {
146  v_DGDeriv(dir, inarray, EdgeExp, coeffs, outarray);
147 }
virtual void v_DGDeriv(const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, ExpansionSharedPtr > &EdgeExp, Array< OneD, Array< OneD, NekDouble >> &coeffs, Array< OneD, NekDouble > &outarray)
Definition: Expansion.cpp:786

References v_DGDeriv().

◆ DivideByQuadratureMetric()

void Nektar::LocalRegions::Expansion::DivideByQuadratureMetric ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
inline

Divided by the metric jacobi and quadrature weights.

Definition at line 183 of file Expansion.h.

186  {
187  v_DivideByQuadratureMetric(inarray, outarray);
188  }
virtual void v_DivideByQuadratureMetric(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
Definition: Expansion.cpp:439

References v_DivideByQuadratureMetric().

◆ DropLocMatrix()

void Nektar::LocalRegions::Expansion::DropLocMatrix ( const LocalRegions::MatrixKey mkey)

Definition at line 94 of file Expansion.cpp.

95 {
96  return v_DropLocMatrix(mkey);
97 }
virtual void v_DropLocMatrix(const LocalRegions::MatrixKey &mkey)
Definition: Expansion.cpp:418

References v_DropLocMatrix().

◆ ExtractDataToCoeffs()

void Nektar::LocalRegions::Expansion::ExtractDataToCoeffs ( const NekDouble data,
const std::vector< unsigned int > &  nummodes,
const int  nmodes_offset,
NekDouble coeffs,
std::vector< LibUtilities::BasisType > &  fromType 
)

Definition at line 110 of file Expansion.cpp.

114 {
115  v_ExtractDataToCoeffs(data, nummodes, nmodes_offset, coeffs, fromType);
116 }
virtual void v_ExtractDataToCoeffs(const NekDouble *data, const std::vector< unsigned int > &nummodes, const int nmodes_offset, NekDouble *coeffs, std::vector< LibUtilities::BasisType > &fromType)
Definition: Expansion.cpp:752

References v_ExtractDataToCoeffs().

◆ GetElmtBndNormDirElmtLen()

const Array< OneD, const NekDouble > & Nektar::LocalRegions::Expansion::GetElmtBndNormDirElmtLen ( const int  nbnd) const

Definition at line 918 of file Expansion.cpp.

920 {
921  auto x = m_elmtBndNormDirElmtLen.find(nbnd);
923  "m_elmtBndNormDirElmtLen normal not computed.");
924  return x->second;
925 }
std::map< int, Array< OneD, NekDouble > > m_elmtBndNormDirElmtLen
the element length in each element boundary(Vertex, edge or face) normal direction calculated based o...
Definition: Expansion.h:288

References ASSERTL0, and m_elmtBndNormDirElmtLen.

◆ GetGeom()

SpatialDomains::GeometrySharedPtr Nektar::LocalRegions::Expansion::GetGeom ( ) const

◆ GetIndexMap()

IndexMapValuesSharedPtr Nektar::LocalRegions::Expansion::GetIndexMap ( const IndexMapKey ikey)
inline

Definition at line 148 of file Expansion.h.

149  {
150  return m_indexMapManager[ikey];
151  }

References m_indexMapManager.

Referenced by Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt().

◆ GetLeftAdjacentElementExp()

ExpansionSharedPtr Nektar::LocalRegions::Expansion::GetLeftAdjacentElementExp ( ) const
inline

Definition at line 443 of file Expansion.h.

444 {
445  ASSERTL1(m_elementLeft.lock().get(), "Left adjacent element not set.");
446  return m_elementLeft.lock();
447 }
#define ASSERTL1(condition, msg)
Assert Level 1 – Debugging which is used whether in FULLDEBUG or DEBUG compilation mode....
Definition: ErrorUtil.hpp:249
ExpansionWeakPtr m_elementLeft
Definition: Expansion.h:279

References ASSERTL1, and m_elementLeft.

Referenced by Nektar::LocalRegions::PointExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::SegExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), and Nektar::LocalRegions::Expansion2D::v_VectorFlux().

◆ GetLeftAdjacentElementTrace()

int Nektar::LocalRegions::Expansion::GetLeftAdjacentElementTrace ( ) const
inline

◆ GetLocMatrix() [1/2]

DNekScalMatSharedPtr Nektar::LocalRegions::Expansion::GetLocMatrix ( const LocalRegions::MatrixKey mkey)

◆ GetLocMatrix() [2/2]

DNekScalMatSharedPtr Nektar::LocalRegions::Expansion::GetLocMatrix ( const StdRegions::MatrixType  mtype,
const StdRegions::ConstFactorMap factors = StdRegions::NullConstFactorMap,
const StdRegions::VarCoeffMap varcoeffs = StdRegions::NullVarCoeffMap 
)

Definition at line 162 of file Expansion.cpp.

166 {
167  MatrixKey mkey(mtype, DetShapeType(), *this, factors, varcoeffs);
168  return GetLocMatrix(mkey);
169 }
LibUtilities::ShapeType DetShapeType() const
This function returns the shape of the expansion domain.
Definition: StdExpansion.h:373

References Nektar::StdRegions::StdExpansion::DetShapeType(), and GetLocMatrix().

◆ GetMetricInfo()

const SpatialDomains::GeomFactorsSharedPtr & Nektar::LocalRegions::Expansion::GetMetricInfo ( ) const

◆ GetMF()

Array< OneD, NekDouble > Nektar::LocalRegions::Expansion::GetMF ( const int  dir,
const int  shapedim,
const StdRegions::VarCoeffMap varcoeffs 
)
protected

Definition at line 638 of file Expansion.cpp.

640 {
641  int coordim = GetCoordim();
642 
643  int nquad0, nquad1, nquad2;
644  int nqtot = 1;
645  switch (shapedim)
646  {
647  case 2:
648  {
649  nquad0 = m_base[0]->GetNumPoints();
650  nquad1 = m_base[1]->GetNumPoints();
651  nqtot = nquad0 * nquad1;
652  break;
653  }
654  case 3:
655  {
656  nquad0 = m_base[0]->GetNumPoints();
657  nquad1 = m_base[1]->GetNumPoints();
658  nquad2 = m_base[2]->GetNumPoints();
659  nqtot = nquad0 * nquad1 * nquad2;
660  break;
661  }
662  default:
663  break;
664  }
665 
666  StdRegions::VarCoeffType MMFCoeffs[15] = {
675 
676  Array<OneD, NekDouble> MF(coordim * nqtot);
677  Array<OneD, NekDouble> tmp(nqtot);
678  for (int k = 0; k < coordim; k++)
679  {
680  StdRegions::VarCoeffMap::const_iterator MFdir =
681  varcoeffs.find(MMFCoeffs[5 * dir + k]);
682  tmp = MFdir->second.GetValue();
683 
684  Vmath::Vcopy(nqtot, &tmp[0], 1, &MF[k * nqtot], 1);
685  }
686 
687  return MF;
688 }
void Vcopy(int n, const T *x, const int incx, T *y, const int incy)
Definition: Vmath.cpp:1255

References Nektar::StdRegions::eVarCoeffMF1Div, Nektar::StdRegions::eVarCoeffMF1Mag, Nektar::StdRegions::eVarCoeffMF1x, Nektar::StdRegions::eVarCoeffMF1y, Nektar::StdRegions::eVarCoeffMF1z, Nektar::StdRegions::eVarCoeffMF2Div, Nektar::StdRegions::eVarCoeffMF2Mag, Nektar::StdRegions::eVarCoeffMF2x, Nektar::StdRegions::eVarCoeffMF2y, Nektar::StdRegions::eVarCoeffMF2z, Nektar::StdRegions::eVarCoeffMF3Div, Nektar::StdRegions::eVarCoeffMF3Mag, Nektar::StdRegions::eVarCoeffMF3x, Nektar::StdRegions::eVarCoeffMF3y, Nektar::StdRegions::eVarCoeffMF3z, Nektar::StdRegions::StdExpansion::GetCoordim(), Nektar::StdRegions::StdExpansion::m_base, and Vmath::Vcopy().

Referenced by Nektar::LocalRegions::Expansion2D::AddHDGHelmholtzEdgeTerms(), and Nektar::LocalRegions::Expansion2D::v_GenMatrix().

◆ GetMFDiv()

Array< OneD, NekDouble > Nektar::LocalRegions::Expansion::GetMFDiv ( const int  dir,
const StdRegions::VarCoeffMap varcoeffs 
)
protected

◆ GetMFMag()

Array< OneD, NekDouble > Nektar::LocalRegions::Expansion::GetMFMag ( const int  dir,
const StdRegions::VarCoeffMap varcoeffs 
)
protected

◆ GetPhysNormals()

const Array<OneD, const NekDouble>& Nektar::LocalRegions::Expansion::GetPhysNormals ( void  )
inline

Definition at line 230 of file Expansion.h.

231  {
232  return v_GetPhysNormals();
233  }
virtual const Array< OneD, const NekDouble > & v_GetPhysNormals()
Definition: Expansion.cpp:878

References v_GetPhysNormals().

◆ GetRightAdjacentElementExp()

ExpansionSharedPtr Nektar::LocalRegions::Expansion::GetRightAdjacentElementExp ( ) const
inline

Definition at line 449 of file Expansion.h.

450 {
451  ASSERTL1(m_elementLeft.lock().get(), "Right adjacent element not set.");
452 
453  return m_elementRight.lock();
454 }
ExpansionWeakPtr m_elementRight
Definition: Expansion.h:280

References ASSERTL1, m_elementLeft, and m_elementRight.

◆ GetRightAdjacentElementTrace()

int Nektar::LocalRegions::Expansion::GetRightAdjacentElementTrace ( ) const
inline

Definition at line 461 of file Expansion.h.

462 {
463  return m_elementTraceRight;
464 }

References m_elementTraceRight.

◆ GetTraceExp()

ExpansionSharedPtr Nektar::LocalRegions::Expansion::GetTraceExp ( const int  traceid)
inline

Definition at line 416 of file Expansion.h.

417 {
418  ASSERTL1(traceid < GetNtraces(), "Trace is out of range.");
419 
420  ExpansionSharedPtr returnval;
421 
422  if (m_traceExp.count(traceid))
423  {
424  // Use stored value
425  returnval = m_traceExp[traceid].lock();
426  }
427  else
428  {
429  // Generate trace exp
430  v_GenTraceExp(traceid, returnval);
431  }
432 
433  return returnval;
434 }
virtual void v_GenTraceExp(const int traceid, ExpansionSharedPtr &exp)
Definition: Expansion.cpp:865
int GetNtraces() const
Returns the number of trace elements connected to this element.
Definition: StdExpansion.h:357
std::shared_ptr< Expansion > ExpansionSharedPtr
Definition: Expansion.h:68

References ASSERTL1, Nektar::StdRegions::StdExpansion::GetNtraces(), m_traceExp, and v_GenTraceExp().

Referenced by Nektar::LocalRegions::Expansion2D::v_GenMatrix().

◆ GetTraceNormal()

const NormalVector & Nektar::LocalRegions::Expansion::GetTraceNormal ( const int  id)

◆ GetTraceOrient()

StdRegions::Orientation Nektar::LocalRegions::Expansion::GetTraceOrient ( int  trace)
inline

◆ GetTracePhysMap()

void Nektar::LocalRegions::Expansion::GetTracePhysMap ( const int  edge,
Array< OneD, int > &  outarray 
)
inline

Definition at line 211 of file Expansion.h.

212  {
213  v_GetTracePhysMap(edge, outarray);
214  }
virtual void v_GetTracePhysMap(const int edge, Array< OneD, int > &outarray)
Definition: Expansion.cpp:849

References v_GetTracePhysMap().

Referenced by StdDerivBaseOnTraceMat().

◆ GetTracePhysVals()

void Nektar::LocalRegions::Expansion::GetTracePhysVals ( const int  trace,
const StdRegions::StdExpansionSharedPtr TraceExp,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray,
StdRegions::Orientation  orient = StdRegions::eNoOrientation 
)
inline

Definition at line 202 of file Expansion.h.

207  {
208  v_GetTracePhysVals(trace, TraceExp, inarray, outarray, orient);
209  }
virtual void v_GetTracePhysVals(const int trace, const StdRegions::StdExpansionSharedPtr &TraceExp, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, StdRegions::Orientation orient)
Definition: Expansion.cpp:839

References v_GetTracePhysVals().

Referenced by Nektar::LocalRegions::Expansion2D::v_GenMatrix().

◆ GetTraceQFactors()

void Nektar::LocalRegions::Expansion::GetTraceQFactors ( const int  trace,
Array< OneD, NekDouble > &  outarray 
)
inline

Extract the metric factors to compute the contravariant fluxes along edge edge and stores them into outarray following the local edge orientation (i.e. anticlockwise convention).

Definition at line 196 of file Expansion.h.

198  {
199  v_GetTraceQFactors(trace, outarray);
200  }
virtual void v_GetTraceQFactors(const int trace, Array< OneD, NekDouble > &outarray)
Definition: Expansion.cpp:831

References v_GetTraceQFactors().

◆ NormalTraceDerivFactors()

void Nektar::LocalRegions::Expansion::NormalTraceDerivFactors ( Array< OneD, Array< OneD, NekDouble >> &  factors,
Array< OneD, Array< OneD, NekDouble >> &  d0factors,
Array< OneD, Array< OneD, NekDouble >> &  d1factors 
)

Definition at line 154 of file Expansion.cpp.

158 {
159  return v_NormalTraceDerivFactors(factors, d0factors, d1factors);
160 }
virtual void v_NormalTraceDerivFactors(Array< OneD, Array< OneD, NekDouble >> &factors, Array< OneD, Array< OneD, NekDouble >> &d0factors, Array< OneD, Array< OneD, NekDouble >> &d1factors)
Definition: Expansion.cpp:806

References v_NormalTraceDerivFactors().

◆ ReOrientTracePhysMap()

void Nektar::LocalRegions::Expansion::ReOrientTracePhysMap ( const StdRegions::Orientation  orient,
Array< OneD, int > &  idmap,
const int  nq0,
const int  nq1 
)
inline

Definition at line 216 of file Expansion.h.

219  {
220  v_ReOrientTracePhysMap(orient, idmap, nq0, nq1);
221  }
virtual void v_ReOrientTracePhysMap(const StdRegions::Orientation orient, Array< OneD, int > &idmap, const int nq0, const int nq1=-1)
Definition: Expansion.cpp:856

References v_ReOrientTracePhysMap().

◆ Reset()

void Nektar::LocalRegions::Expansion::Reset ( )

Definition at line 176 of file Expansion.cpp.

177 {
178  // Clear metrics
179  m_metrics.clear();
180 
181  // Regenerate geometry factors
182  m_metricinfo = m_geom->GetGeomFactors();
183 }

References m_geom, m_metricinfo, and m_metrics.

◆ SetAdjacentElementExp()

void Nektar::LocalRegions::Expansion::SetAdjacentElementExp ( int  traceid,
ExpansionSharedPtr e 
)
inline

Definition at line 466 of file Expansion.h.

468 {
469  if (m_elementLeft.lock().get())
470  {
471  m_elementRight = exp;
472  m_elementTraceRight = traceid;
473  }
474  else
475  {
476  m_elementLeft = exp;
477  m_elementTraceLeft = traceid;
478  }
479 }

References m_elementLeft, m_elementRight, m_elementTraceLeft, and m_elementTraceRight.

◆ SetCoeffsToOrientation()

void Nektar::LocalRegions::Expansion::SetCoeffsToOrientation ( StdRegions::Orientation  dir,
Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
inline

Definition at line 175 of file Expansion.h.

178  {
179  v_SetCoeffsToOrientation(dir, inarray, outarray);
180  }
virtual void v_SetCoeffsToOrientation(StdRegions::Orientation dir, Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) override
Definition: Expansion.cpp:823

References v_SetCoeffsToOrientation().

◆ SetPhysNormals()

void Nektar::LocalRegions::Expansion::SetPhysNormals ( Array< OneD, const NekDouble > &  normal)
inline

Definition at line 235 of file Expansion.h.

236  {
237  v_SetPhysNormals(normal);
238  }
virtual void v_SetPhysNormals(Array< OneD, const NekDouble > &normal)
Definition: Expansion.cpp:884

References v_SetPhysNormals().

◆ SetTraceExp()

void Nektar::LocalRegions::Expansion::SetTraceExp ( const int  traceid,
ExpansionSharedPtr f 
)
inline

Definition at line 436 of file Expansion.h.

437 {
438  ASSERTL1(traceid < GetNtraces(), "Trace out of range.");
439 
440  m_traceExp[traceid] = exp;
441 }

References ASSERTL1, Nektar::StdRegions::StdExpansion::GetNtraces(), and m_traceExp.

◆ SetUpPhysNormals()

void Nektar::LocalRegions::Expansion::SetUpPhysNormals ( const int  trace)
inline

Definition at line 240 of file Expansion.h.

241  {
242  v_SetUpPhysNormals(trace);
243  }
virtual void v_SetUpPhysNormals(const int id)
Definition: Expansion.cpp:890

References v_SetUpPhysNormals().

◆ StdDerivBaseOnTraceMat()

void Nektar::LocalRegions::Expansion::StdDerivBaseOnTraceMat ( Array< OneD, DNekMatSharedPtr > &  DerivMat)

Definition at line 479 of file Expansion.cpp.

480 {
481  int nquad = GetTotPoints();
482  int ntraces = GetNtraces();
483  int ndir = m_base.size();
484 
485  Array<OneD, NekDouble> coeffs(m_ncoeffs);
486  Array<OneD, NekDouble> phys(nquad);
487 
488  Array<OneD, Array<OneD, int>> traceids(ntraces);
489 
490  int tottracepts = 0;
491  for (int i = 0; i < ntraces; ++i)
492  {
493  GetTracePhysMap(i, traceids[i]);
494  tottracepts += GetTraceNumPoints(i);
495  }
496 
497  // initialise array to null so can call for
498  // differnt dimensions
499  Array<OneD, Array<OneD, NekDouble>> Deriv(3, NullNekDouble1DArray);
500 
501  DerivMat = Array<OneD, DNekMatSharedPtr>(ndir);
502 
503  for (int i = 0; i < ndir; ++i)
504  {
505  Deriv[i] = Array<OneD, NekDouble>(nquad);
506  DerivMat[i] =
508  }
509 
510  for (int i = 0; i < m_ncoeffs; ++i)
511  {
512  Vmath::Zero(m_ncoeffs, coeffs, 1);
513  coeffs[i] = 1.0;
514  BwdTrans(coeffs, phys);
515 
516  // dphi_i/d\xi_1, dphi_i/d\xi_2 dphi_i/d\xi_3
517  StdPhysDeriv(phys, Deriv[0], Deriv[1], Deriv[2]);
518 
519  int cnt = 0;
520  for (int j = 0; j < ntraces; ++j)
521  {
522  int nTracePts = GetTraceNumPoints(j);
523  for (int k = 0; k < nTracePts; ++k)
524  {
525  for (int d = 0; d < ndir; ++d)
526  {
527  (*DerivMat[d])(i, cnt + k) = Deriv[d][traceids[j][k]];
528  }
529  }
530  cnt += nTracePts;
531  }
532  }
533 }
void GetTracePhysMap(const int edge, Array< OneD, int > &outarray)
Definition: Expansion.h:211
int GetTraceNumPoints(const int i) const
This function returns the number of quadrature points belonging to the i-th trace.
Definition: StdExpansion.h:287
void BwdTrans(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray)
This function performs the Backward transformation from coefficient space to physical space.
Definition: StdExpansion.h:430
void StdPhysDeriv(const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray)
Definition: StdExpansion.h:881
static Array< OneD, NekDouble > NullNekDouble1DArray
void Zero(int n, T *x, const int incx)
Zero vector.
Definition: Vmath.cpp:492

References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::StdRegions::StdExpansion::BwdTrans(), Nektar::StdRegions::StdExpansion::GetNtraces(), Nektar::StdRegions::StdExpansion::GetTotPoints(), Nektar::StdRegions::StdExpansion::GetTraceNumPoints(), GetTracePhysMap(), Nektar::StdRegions::StdExpansion::m_base, Nektar::StdRegions::StdExpansion::m_ncoeffs, Nektar::NullNekDouble1DArray, Nektar::StdRegions::StdExpansion::StdPhysDeriv(), and Vmath::Zero().

◆ TraceNormLen()

void Nektar::LocalRegions::Expansion::TraceNormLen ( const int  traceid,
NekDouble h,
NekDouble p 
)
inline

Definition at line 252 of file Expansion.h.

253  {
254  v_TraceNormLen(traceid, h, p);
255  }
virtual void v_TraceNormLen(const int traceid, NekDouble &h, NekDouble &p)
Definition: Expansion.cpp:912

References CellMLToNektar.cellml_metadata::p, and v_TraceNormLen().

Referenced by Nektar::LocalRegions::Expansion2D::v_GenMatrix().

◆ v_AddEdgeNormBoundaryInt() [1/2]

void Nektar::LocalRegions::Expansion::v_AddEdgeNormBoundaryInt ( const int  edge,
const std::shared_ptr< Expansion > &  EdgeExp,
const Array< OneD, const NekDouble > &  Fn,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Definition at line 770 of file Expansion.cpp.

773 {
774  boost::ignore_unused(edge, EdgeExp, Fn, outarray);
775  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
776 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

◆ v_AddEdgeNormBoundaryInt() [2/2]

void Nektar::LocalRegions::Expansion::v_AddEdgeNormBoundaryInt ( const int  edge,
const std::shared_ptr< Expansion > &  EdgeExp,
const Array< OneD, const NekDouble > &  Fx,
const Array< OneD, const NekDouble > &  Fy,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Definition at line 761 of file Expansion.cpp.

765 {
766  boost::ignore_unused(edge, EdgeExp, Fx, Fy, outarray);
767  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
768 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by AddEdgeNormBoundaryInt().

◆ v_AddFaceNormBoundaryInt()

void Nektar::LocalRegions::Expansion::v_AddFaceNormBoundaryInt ( const int  face,
const std::shared_ptr< Expansion > &  FaceExp,
const Array< OneD, const NekDouble > &  Fn,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Definition at line 778 of file Expansion.cpp.

781 {
782  boost::ignore_unused(face, FaceExp, Fn, outarray);
783  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
784 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by AddFaceNormBoundaryInt().

◆ v_AddRobinMassMatrix()

void Nektar::LocalRegions::Expansion::v_AddRobinMassMatrix ( const int  face,
const Array< OneD, const NekDouble > &  primCoeffs,
DNekMatSharedPtr inoutmat 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion1D, Nektar::LocalRegions::Expansion3D, and Nektar::LocalRegions::Expansion2D.

Definition at line 896 of file Expansion.cpp.

899 {
900  boost::ignore_unused(trace, primCoeffs, inoutmat);
901  NEKERROR(ErrorUtil::efatal, "This function is not valid for this class");
902 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by AddRobinMassMatrix().

◆ v_AddRobinTraceContribution()

void Nektar::LocalRegions::Expansion::v_AddRobinTraceContribution ( const int  traceid,
const Array< OneD, const NekDouble > &  primCoeffs,
const Array< OneD, NekDouble > &  incoeffs,
Array< OneD, NekDouble > &  coeffs 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion1D, and Nektar::LocalRegions::Expansion2D.

Definition at line 904 of file Expansion.cpp.

907 {
908  boost::ignore_unused(traceid, primCoeffs, incoeffs, coeffs);
909  NEKERROR(ErrorUtil::efatal, "This function is not valid for this class");
910 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by AddRobinTraceContribution().

◆ v_AlignVectorToCollapsedDir()

void Nektar::LocalRegions::Expansion::v_AlignVectorToCollapsedDir ( const int  dir,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, Array< OneD, NekDouble >> &  outarray 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::TriExp, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::QuadExp, Nektar::LocalRegions::PyrExp, Nektar::LocalRegions::PrismExp, Nektar::LocalRegions::NodalTriExp, and Nektar::LocalRegions::HexExp.

Definition at line 927 of file Expansion.cpp.

930 {
931  boost::ignore_unused(dir, inarray, outarray);
932  NEKERROR(ErrorUtil::efatal, "v_AlignVectorToCollapsedDir is not defined");
933 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by AlignVectorToCollapsedDir().

◆ v_BuildTransformationMatrix()

DNekMatSharedPtr Nektar::LocalRegions::Expansion::v_BuildTransformationMatrix ( const DNekScalMatSharedPtr r_bnd,
const StdRegions::MatrixType  matrixType 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D.

Definition at line 736 of file Expansion.cpp.

738 {
739  boost::ignore_unused(r_bnd, matrixType);
740  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
741  return NullDNekMatSharedPtr;
742 }
static DNekMatSharedPtr NullDNekMatSharedPtr
Definition: NekTypeDefs.hpp:83

References Nektar::ErrorUtil::efatal, NEKERROR, and Nektar::NullDNekMatSharedPtr.

Referenced by BuildTransformationMatrix().

◆ v_BuildVertexMatrix()

DNekMatSharedPtr Nektar::LocalRegions::Expansion::v_BuildVertexMatrix ( const DNekScalMatSharedPtr r_bnd)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, and Nektar::LocalRegions::Expansion2D.

Definition at line 744 of file Expansion.cpp.

746 {
747  boost::ignore_unused(r_bnd);
748  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
749  return NullDNekMatSharedPtr;
750 }

References Nektar::ErrorUtil::efatal, NEKERROR, and Nektar::NullDNekMatSharedPtr.

Referenced by BuildVertexMatrix().

◆ v_ComputeLaplacianMetric()

virtual void Nektar::LocalRegions::Expansion::v_ComputeLaplacianMetric ( )
inlineprotectedvirtual

◆ v_ComputeTraceNormal()

void Nektar::LocalRegions::Expansion::v_ComputeTraceNormal ( const int  id)
protectedvirtual

◆ v_DGDeriv()

void Nektar::LocalRegions::Expansion::v_DGDeriv ( const int  dir,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, ExpansionSharedPtr > &  EdgeExp,
Array< OneD, Array< OneD, NekDouble >> &  coeffs,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, and Nektar::LocalRegions::Expansion2D.

Definition at line 786 of file Expansion.cpp.

791 {
792  boost::ignore_unused(dir, inarray, EdgeExp, coeffs, outarray);
793  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
794 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by DGDeriv().

◆ v_DivideByQuadratureMetric()

void Nektar::LocalRegions::Expansion::v_DivideByQuadratureMetric ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Definition at line 439 of file Expansion.cpp.

442 {
443  const int nqtot = GetTotPoints();
444 
445  if (m_metrics.count(eMetricQuadrature) == 0)
446  {
448  }
449 
450  Vmath::Vdiv(nqtot, inarray, 1, m_metrics[eMetricQuadrature], 1, outarray,
451  1);
452 }
void Vdiv(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x/y.
Definition: Vmath.cpp:284

References ComputeQuadratureMetric(), Nektar::LocalRegions::eMetricQuadrature, Nektar::StdRegions::StdExpansion::GetTotPoints(), m_metrics, and Vmath::Vdiv().

Referenced by DivideByQuadratureMetric().

◆ v_DropLocMatrix()

void Nektar::LocalRegions::Expansion::v_DropLocMatrix ( const LocalRegions::MatrixKey mkey)
protectedvirtual

◆ v_ExtractDataToCoeffs()

void Nektar::LocalRegions::Expansion::v_ExtractDataToCoeffs ( const NekDouble data,
const std::vector< unsigned int > &  nummodes,
const int  nmodes_offset,
NekDouble coeffs,
std::vector< LibUtilities::BasisType > &  fromType 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::TriExp, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::SegExp, Nektar::LocalRegions::QuadExp, Nektar::LocalRegions::PyrExp, Nektar::LocalRegions::PrismExp, and Nektar::LocalRegions::HexExp.

Definition at line 752 of file Expansion.cpp.

756 {
757  boost::ignore_unused(data, nummodes, nmodes_offset, coeffs, fromType);
758  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
759 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by ExtractDataToCoeffs().

◆ v_GenTraceExp()

void Nektar::LocalRegions::Expansion::v_GenTraceExp ( const int  traceid,
ExpansionSharedPtr exp 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, and Nektar::LocalRegions::Expansion2D.

Definition at line 865 of file Expansion.cpp.

866 {
867  boost::ignore_unused(traceid, exp);
869  "Method does not exist for this shape or library");
870 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by GetTraceExp().

◆ v_GetCoordim()

virtual int Nektar::LocalRegions::Expansion::v_GetCoordim ( ) const
inlineoverrideprotectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 317 of file Expansion.h.

318  {
319  return m_geom->GetCoordim();
320  }

References m_geom.

◆ v_GetCoords()

void Nektar::LocalRegions::Expansion::v_GetCoords ( Array< OneD, NekDouble > &  coords_1,
Array< OneD, NekDouble > &  coords_2,
Array< OneD, NekDouble > &  coords_3 
)
overrideprotectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Reimplemented in Nektar::LocalRegions::TriExp, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::SegExp, Nektar::LocalRegions::QuadExp, Nektar::LocalRegions::PyrExp, Nektar::LocalRegions::PrismExp, Nektar::LocalRegions::HexExp, Nektar::LocalRegions::NodalTriExp, and Nektar::LocalRegions::PointExp.

Definition at line 535 of file Expansion.cpp.

538 {
539  ASSERTL1(m_geom, "m_geom not defined");
540 
541  // get physical points defined in Geom
542  m_geom->FillGeom();
543 
544  const int expDim = m_base.size();
545  int nqGeom = 1;
546  bool doCopy = true;
547 
548  Array<OneD, LibUtilities::BasisSharedPtr> CBasis(expDim);
549  Array<OneD, Array<OneD, NekDouble>> tmp(3);
550 
551  for (int i = 0; i < expDim; ++i)
552  {
553  CBasis[i] = m_geom->GetXmap()->GetBasis(i);
554  nqGeom *= CBasis[i]->GetNumPoints();
555  doCopy = doCopy &&
556  m_base[i]->GetBasisKey().SamePoints(CBasis[i]->GetBasisKey());
557  }
558 
559  tmp[0] = coords_0;
560  tmp[1] = coords_1;
561  tmp[2] = coords_2;
562 
563  if (doCopy)
564  {
565  for (int i = 0; i < m_geom->GetCoordim(); ++i)
566  {
567  m_geom->GetXmap()->BwdTrans(m_geom->GetCoeffs(i), tmp[i]);
568  }
569  }
570  else
571  {
572  for (int i = 0; i < m_geom->GetCoordim(); ++i)
573  {
574  Array<OneD, NekDouble> tmpGeom(nqGeom);
575  m_geom->GetXmap()->BwdTrans(m_geom->GetCoeffs(i), tmpGeom);
576 
577  switch (expDim)
578  {
579  case 1:
580  {
582  CBasis[0]->GetPointsKey(), &tmpGeom[0],
583  m_base[0]->GetPointsKey(), &tmp[i][0]);
584  break;
585  }
586  case 2:
587  {
589  CBasis[0]->GetPointsKey(), CBasis[1]->GetPointsKey(),
590  &tmpGeom[0], m_base[0]->GetPointsKey(),
591  m_base[1]->GetPointsKey(), &tmp[i][0]);
592  break;
593  }
594  case 3:
595  {
597  CBasis[0]->GetPointsKey(), CBasis[1]->GetPointsKey(),
598  CBasis[2]->GetPointsKey(), &tmpGeom[0],
599  m_base[0]->GetPointsKey(), m_base[1]->GetPointsKey(),
600  m_base[2]->GetPointsKey(), &tmp[i][0]);
601  break;
602  }
603  }
604  }
605  }
606 }
void Interp1D(const BasisKey &fbasis0, const Array< OneD, const NekDouble > &from, const BasisKey &tbasis0, Array< OneD, NekDouble > &to)
this function interpolates a 1D function evaluated at the quadrature points of the basis fbasis0 to ...
Definition: Interp.cpp:52
void Interp3D(const BasisKey &fbasis0, const BasisKey &fbasis1, const BasisKey &fbasis2, const Array< OneD, const NekDouble > &from, const BasisKey &tbasis0, const BasisKey &tbasis1, const BasisKey &tbasis2, Array< OneD, NekDouble > &to)
this function interpolates a 3D function evaluated at the quadrature points of the 3D basis,...
Definition: Interp.cpp:167
void Interp2D(const BasisKey &fbasis0, const BasisKey &fbasis1, const Array< OneD, const NekDouble > &from, const BasisKey &tbasis0, const BasisKey &tbasis1, Array< OneD, NekDouble > &to)
this function interpolates a 2D function evaluated at the quadrature points of the 2D basis,...
Definition: Interp.cpp:106

References ASSERTL1, Nektar::LibUtilities::Interp1D(), Nektar::LibUtilities::Interp2D(), Nektar::LibUtilities::Interp3D(), Nektar::StdRegions::StdExpansion::m_base, and m_geom.

Referenced by Nektar::LocalRegions::NodalTriExp::GetCoords(), Nektar::LocalRegions::HexExp::v_GetCoords(), Nektar::LocalRegions::PrismExp::v_GetCoords(), Nektar::LocalRegions::PyrExp::v_GetCoords(), Nektar::LocalRegions::QuadExp::v_GetCoords(), Nektar::LocalRegions::SegExp::v_GetCoords(), Nektar::LocalRegions::TetExp::v_GetCoords(), and Nektar::LocalRegions::TriExp::v_GetCoords().

◆ v_GetLocMatrix()

DNekScalMatSharedPtr Nektar::LocalRegions::Expansion::v_GetLocMatrix ( const LocalRegions::MatrixKey mkey)
protectedvirtual

Reimplemented in Nektar::LocalRegions::TriExp, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::SegExp, Nektar::LocalRegions::QuadExp, Nektar::LocalRegions::PyrExp, Nektar::LocalRegions::PrismExp, Nektar::LocalRegions::NodalTriExp, and Nektar::LocalRegions::HexExp.

Definition at line 269 of file Expansion.cpp.

271 {
272  boost::ignore_unused(mkey);
273  NEKERROR(ErrorUtil::efatal, "This function is only valid for LocalRegions");
275 }
static DNekScalMatSharedPtr NullDNekScalMatSharedPtr
Definition: NekTypeDefs.hpp:84

References Nektar::ErrorUtil::efatal, NEKERROR, and Nektar::NullDNekScalMatSharedPtr.

Referenced by GetLocMatrix().

◆ v_GetPhysNormals()

const Array< OneD, const NekDouble > & Nektar::LocalRegions::Expansion::v_GetPhysNormals ( void  )
protectedvirtual

Reimplemented in Nektar::LocalRegions::SegExp.

Definition at line 878 of file Expansion.cpp.

879 {
880  NEKERROR(ErrorUtil::efatal, "This function is not valid for this class");
881  return NullNekDouble1DArray;
882 }

References Nektar::ErrorUtil::efatal, NEKERROR, and Nektar::NullNekDouble1DArray.

Referenced by GetPhysNormals().

◆ v_GetTraceOrient()

StdRegions::Orientation Nektar::LocalRegions::Expansion::v_GetTraceOrient ( int  trace)
protectedvirtual

◆ v_GetTracePhysMap()

void Nektar::LocalRegions::Expansion::v_GetTracePhysMap ( const int  edge,
Array< OneD, int > &  outarray 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::SegExp, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::PyrExp, Nektar::LocalRegions::PrismExp, Nektar::LocalRegions::HexExp, Nektar::LocalRegions::TriExp, and Nektar::LocalRegions::QuadExp.

Definition at line 849 of file Expansion.cpp.

850 {
851  boost::ignore_unused(edge, outarray);
853  "Method does not exist for this shape or library");
854 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by GetTracePhysMap().

◆ v_GetTracePhysVals()

void Nektar::LocalRegions::Expansion::v_GetTracePhysVals ( const int  trace,
const StdRegions::StdExpansionSharedPtr TraceExp,
const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray,
StdRegions::Orientation  orient 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, Nektar::LocalRegions::TriExp, Nektar::LocalRegions::SegExp, and Nektar::LocalRegions::QuadExp.

Definition at line 839 of file Expansion.cpp.

843 {
844  boost::ignore_unused(trace, TraceExp, inarray, outarray, orient);
846  "Method does not exist for this shape or library");
847 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by GetTracePhysVals().

◆ v_GetTraceQFactors()

void Nektar::LocalRegions::Expansion::v_GetTraceQFactors ( const int  trace,
Array< OneD, NekDouble > &  outarray 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::TriExp, and Nektar::LocalRegions::QuadExp.

Definition at line 831 of file Expansion.cpp.

833 {
834  boost::ignore_unused(trace, outarray);
836  "Method does not exist for this shape or library");
837 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by GetTraceQFactors().

◆ v_MultiplyByQuadratureMetric()

void Nektar::LocalRegions::Expansion::v_MultiplyByQuadratureMetric ( const Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
overrideprotectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Definition at line 424 of file Expansion.cpp.

427 {
428  const int nqtot = GetTotPoints();
429 
430  if (m_metrics.count(eMetricQuadrature) == 0)
431  {
433  }
434 
435  Vmath::Vmul(nqtot, m_metrics[eMetricQuadrature], 1, inarray, 1, outarray,
436  1);
437 }
void Vmul(int n, const T *x, const int incx, const T *y, const int incy, T *z, const int incz)
Multiply vector z = x*y.
Definition: Vmath.cpp:209

References ComputeQuadratureMetric(), Nektar::LocalRegions::eMetricQuadrature, Nektar::StdRegions::StdExpansion::GetTotPoints(), m_metrics, and Vmath::Vmul().

◆ v_NormalTraceDerivFactors()

void Nektar::LocalRegions::Expansion::v_NormalTraceDerivFactors ( Array< OneD, Array< OneD, NekDouble >> &  factors,
Array< OneD, Array< OneD, NekDouble >> &  d0factors,
Array< OneD, Array< OneD, NekDouble >> &  d1factors 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::TriExp, Nektar::LocalRegions::QuadExp, Nektar::LocalRegions::HexExp, Nektar::LocalRegions::Expansion1D, Nektar::LocalRegions::TetExp, Nektar::LocalRegions::PyrExp, and Nektar::LocalRegions::PrismExp.

Definition at line 806 of file Expansion.cpp.

810 {
811  boost::ignore_unused(factors, d0factors, d1factors);
813  "This function is only valid for "
814  "shape expansion in LocalRegions, not parant class");
815 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by NormalTraceDerivFactors().

◆ v_ReOrientTracePhysMap()

void Nektar::LocalRegions::Expansion::v_ReOrientTracePhysMap ( const StdRegions::Orientation  orient,
Array< OneD, int > &  idmap,
const int  nq0,
const int  nq1 = -1 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, Nektar::LocalRegions::Expansion2D, and Nektar::LocalRegions::Expansion1D.

Definition at line 856 of file Expansion.cpp.

859 {
860  boost::ignore_unused(orient, idmap, nq0, nq1);
862  "Method does not exist for this shape or library");
863 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by ReOrientTracePhysMap().

◆ v_SetCoeffsToOrientation()

void Nektar::LocalRegions::Expansion::v_SetCoeffsToOrientation ( StdRegions::Orientation  dir,
Array< OneD, const NekDouble > &  inarray,
Array< OneD, NekDouble > &  outarray 
)
overrideprotectedvirtual

Reimplemented from Nektar::StdRegions::StdExpansion.

Reimplemented in Nektar::LocalRegions::SegExp.

Definition at line 823 of file Expansion.cpp.

826 {
827  boost::ignore_unused(dir, inarray, outarray);
828  NEKERROR(ErrorUtil::efatal, "This function is not defined for this shape");
829 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by SetCoeffsToOrientation().

◆ v_SetPhysNormals()

void Nektar::LocalRegions::Expansion::v_SetPhysNormals ( Array< OneD, const NekDouble > &  normal)
protectedvirtual

Definition at line 884 of file Expansion.cpp.

885 {
886  boost::ignore_unused(normal);
887  NEKERROR(ErrorUtil::efatal, "This function is not valid for this class");
888 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by SetPhysNormals().

◆ v_SetUpPhysNormals()

void Nektar::LocalRegions::Expansion::v_SetUpPhysNormals ( const int  id)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion2D.

Definition at line 890 of file Expansion.cpp.

891 {
892  boost::ignore_unused(edge);
893  NEKERROR(ErrorUtil::efatal, "This function is not valid for this class");
894 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by SetUpPhysNormals().

◆ v_TraceNormLen()

void Nektar::LocalRegions::Expansion::v_TraceNormLen ( const int  traceid,
NekDouble h,
NekDouble p 
)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion3D, Nektar::LocalRegions::Expansion2D, and Nektar::LocalRegions::Expansion1D.

Definition at line 912 of file Expansion.cpp.

913 {
914  boost::ignore_unused(traceid, h, p);
915  NEKERROR(ErrorUtil::efatal, "This method has not been defined");
916 }

References Nektar::ErrorUtil::efatal, NEKERROR, and CellMLToNektar.cellml_metadata::p.

Referenced by TraceNormLen().

◆ v_VectorFlux()

NekDouble Nektar::LocalRegions::Expansion::v_VectorFlux ( const Array< OneD, Array< OneD, NekDouble >> &  vec)
protectedvirtual

Reimplemented in Nektar::LocalRegions::Expansion2D, and Nektar::LocalRegions::Expansion1D.

Definition at line 796 of file Expansion.cpp.

798 {
799  boost::ignore_unused(vec);
801  "This function is only valid for "
802  "shape expansion in LocalRegions, not parant class");
803  return 0.0;
804 }

References Nektar::ErrorUtil::efatal, and NEKERROR.

Referenced by VectorFlux().

◆ VectorFlux()

NekDouble Nektar::LocalRegions::Expansion::VectorFlux ( const Array< OneD, Array< OneD, NekDouble >> &  vec)

Definition at line 149 of file Expansion.cpp.

150 {
151  return v_VectorFlux(vec);
152 }
virtual NekDouble v_VectorFlux(const Array< OneD, Array< OneD, NekDouble >> &vec)
Definition: Expansion.cpp:796

References v_VectorFlux().

Member Data Documentation

◆ m_elementLeft

ExpansionWeakPtr Nektar::LocalRegions::Expansion::m_elementLeft
protected

◆ m_elementRight

ExpansionWeakPtr Nektar::LocalRegions::Expansion::m_elementRight
protected

Definition at line 280 of file Expansion.h.

Referenced by GetRightAdjacentElementExp(), and SetAdjacentElementExp().

◆ m_elementTraceLeft

int Nektar::LocalRegions::Expansion::m_elementTraceLeft = -1
protected

Definition at line 281 of file Expansion.h.

Referenced by GetLeftAdjacentElementTrace(), and SetAdjacentElementExp().

◆ m_elementTraceRight

int Nektar::LocalRegions::Expansion::m_elementTraceRight = -1
protected

Definition at line 282 of file Expansion.h.

Referenced by GetRightAdjacentElementTrace(), and SetAdjacentElementExp().

◆ m_elmtBndNormDirElmtLen

std::map<int, Array<OneD, NekDouble> > Nektar::LocalRegions::Expansion::m_elmtBndNormDirElmtLen
protected

◆ m_geom

SpatialDomains::GeometrySharedPtr Nektar::LocalRegions::Expansion::m_geom
protected

Definition at line 275 of file Expansion.h.

Referenced by Nektar::LocalRegions::SegExp::CreateMatrix(), Expansion(), Nektar::LocalRegions::NodalTriExp::GetCoord(), Nektar::LocalRegions::PointExp::GetCoords(), GetGeom(), Nektar::LocalRegions::PointExp::GetGeom(), Nektar::LocalRegions::Expansion0D::GetGeom0D(), Nektar::LocalRegions::Expansion1D::GetGeom1D(), Nektar::LocalRegions::Expansion2D::GetGeom2D(), Nektar::LocalRegions::Expansion3D::GetGeom3D(), Nektar::LocalRegions::NodalTriExp::PhysEvaluate(), Reset(), Nektar::LocalRegions::Expansion2D::v_AddEdgeNormBoundaryInt(), Nektar::LocalRegions::NodalTriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::QuadExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::Expansion2D::v_GenTraceExp(), Nektar::LocalRegions::HexExp::v_GetCoord(), Nektar::LocalRegions::PrismExp::v_GetCoord(), Nektar::LocalRegions::PyrExp::v_GetCoord(), Nektar::LocalRegions::QuadExp::v_GetCoord(), Nektar::LocalRegions::SegExp::v_GetCoord(), Nektar::LocalRegions::TetExp::v_GetCoord(), Nektar::LocalRegions::TriExp::v_GetCoord(), v_GetCoordim(), Nektar::LocalRegions::PointExp::v_GetCoords(), v_GetCoords(), Nektar::LocalRegions::PrismExp::v_GetSimplexEquiSpacedConnectivity(), Nektar::LocalRegions::QuadExp::v_GetTraceOrient(), Nektar::LocalRegions::SegExp::v_HelmholtzMatrixOp(), Nektar::LocalRegions::SegExp::v_IProductWRTDerivBase(), Nektar::LocalRegions::QuadExp::v_IProductWRTDerivBase_SumFac(), Nektar::LocalRegions::SegExp::v_LaplacianMatrixOp(), Nektar::LocalRegions::SegExp::v_PhysDeriv_n(), Nektar::LocalRegions::SegExp::v_PhysDeriv_s(), Nektar::LocalRegions::QuadExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::TriExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::PrismExp::v_PhysEvaluate(), Nektar::LocalRegions::PyrExp::v_PhysEvaluate(), Nektar::LocalRegions::QuadExp::v_PhysEvaluate(), Nektar::LocalRegions::SegExp::v_PhysEvaluate(), Nektar::LocalRegions::TriExp::v_PhysEvaluate(), Nektar::LocalRegions::HexExp::v_PhysEvaluate(), Nektar::LocalRegions::TetExp::v_PhysEvaluate(), and Nektar::LocalRegions::NodalTriExp::v_PhysEvaluate().

◆ m_indexMapManager

LibUtilities::NekManager<IndexMapKey, IndexMapValues, IndexMapKey::opLess> Nektar::LocalRegions::Expansion::m_indexMapManager
protected

Definition at line 272 of file Expansion.h.

Referenced by GetIndexMap().

◆ m_metricinfo

SpatialDomains::GeomFactorsSharedPtr Nektar::LocalRegions::Expansion::m_metricinfo
protected

Definition at line 276 of file Expansion.h.

Referenced by ComputeGmatcdotMF(), ComputeQuadratureMetric(), Nektar::LocalRegions::Expansion2D::CreateMatrix(), Nektar::LocalRegions::SegExp::CreateMatrix(), CreateStaticCondMatrix(), Expansion(), GetMetricInfo(), Nektar::LocalRegions::NodalTriExp::Integral(), Nektar::LocalRegions::NodalTriExp::PhysDeriv(), Reset(), Nektar::LocalRegions::HexExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::NodalTriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PrismExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::PyrExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::QuadExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TetExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::TriExp::v_AlignVectorToCollapsedDir(), Nektar::LocalRegions::HexExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::PyrExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::QuadExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::TriExp::v_ComputeLaplacianMetric(), Nektar::LocalRegions::QuadExp::v_GetTraceQFactors(), Nektar::LocalRegions::SegExp::v_HelmholtzMatrixOp(), Nektar::LocalRegions::HexExp::v_Integral(), Nektar::LocalRegions::PrismExp::v_Integral(), Nektar::LocalRegions::PyrExp::v_Integral(), Nektar::LocalRegions::QuadExp::v_Integral(), Nektar::LocalRegions::SegExp::v_Integral(), Nektar::LocalRegions::TetExp::v_Integral(), Nektar::LocalRegions::TriExp::v_Integral(), Nektar::LocalRegions::SegExp::v_IProductWRTBase(), Nektar::LocalRegions::SegExp::v_IProductWRTDerivBase(), Nektar::LocalRegions::HexExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::TriExp::v_IProductWRTDirectionalDerivBase_SumFac(), Nektar::LocalRegions::SegExp::v_LaplacianMatrixOp(), Nektar::LocalRegions::PrismExp::v_LaplacianMatrixOp_MatFree_Kernel(), Nektar::LocalRegions::PrismExp::v_NormalTraceDerivFactors(), Nektar::LocalRegions::HexExp::v_NormalTraceDerivFactors(), Nektar::LocalRegions::QuadExp::v_NormalTraceDerivFactors(), Nektar::LocalRegions::TriExp::v_NormalTraceDerivFactors(), Nektar::LocalRegions::QuadExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::TriExp::v_NormVectorIProductWRTBase(), Nektar::LocalRegions::HexExp::v_PhysDeriv(), Nektar::LocalRegions::PrismExp::v_PhysDeriv(), Nektar::LocalRegions::PyrExp::v_PhysDeriv(), Nektar::LocalRegions::TetExp::v_PhysDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDeriv(), Nektar::LocalRegions::TriExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv(), Nektar::LocalRegions::SegExp::v_PhysDeriv_n(), Nektar::LocalRegions::SegExp::v_PhysDeriv_s(), Nektar::LocalRegions::HexExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::QuadExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::TriExp::v_PhysDirectionalDeriv(), Nektar::LocalRegions::HexExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PrismExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::PyrExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::QuadExp::v_SVVLaplacianFilter(), Nektar::LocalRegions::TetExp::v_SVVLaplacianFilter(), and Nektar::LocalRegions::TriExp::v_SVVLaplacianFilter().

◆ m_metrics

MetricMap Nektar::LocalRegions::Expansion::m_metrics
protected

◆ m_traceExp

std::map<int, ExpansionWeakPtr> Nektar::LocalRegions::Expansion::m_traceExp
protected

◆ m_traceNormals

std::map<int, NormalVector> Nektar::LocalRegions::Expansion::m_traceNormals
protected