Nektar++
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This class is the abstraction of a one-dimensional multi-elemental expansions which is merely a collection of local expansions. More...
#include <ExpList1D.h>
Public Member Functions | |
ExpList1D () | |
The default constructor. More... | |
ExpList1D (const ExpList1D &In, const bool DeclareCoeffPhysArrays=true) | |
The copy constructor. More... | |
ExpList1D (const ExpList1D &In, const std::vector< unsigned int > &eIDs, const bool DeclareCoeffPhysArrays=true) | |
Constructor copying only elements defined in eIds. More... | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const LibUtilities::BasisKey &Ba, const SpatialDomains::MeshGraphSharedPtr &graph1D) | |
Construct an ExpList1D from a given graph. More... | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::MeshGraphSharedPtr &graph1D, const bool DeclareCoeffPhysArrays=true) | |
This constructor sets up a list of local expansions based on an input graph1D. More... | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::MeshGraphSharedPtr &graph1D, const SpatialDomains::CompositeMap &domain, const bool DeclareCoeffPhysArrays=true, const std::string var="DefaultVar", bool SetToOneSpaceDimension=false) | |
This constructor sets up a list of local expansions based on an input compositeMap. More... | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::CompositeMap &domain, const SpatialDomains::MeshGraphSharedPtr &graph2D, const bool DeclareCoeffPhysArrays=true, const std::string variable="DefaultVar") | |
Specialised constructor for Neumann boundary conditions in DisContField2D and ContField2D. More... | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::CompositeMap &domain, const SpatialDomains::MeshGraphSharedPtr &graph1D, int i, const bool DeclareCoeffPhysArrays=true) | |
ExpList1D (const LibUtilities::SessionReaderSharedPtr &pSession, const Array< OneD, const ExpListSharedPtr > &bndConstraint, const Array< OneD, const SpatialDomains::BoundaryConditionShPtr > &bndCond, const LocalRegions::ExpansionVector &locexp, const SpatialDomains::MeshGraphSharedPtr &graph2D, const PeriodicMap &periodicEdges, const bool DeclareCoeffPhysArrays=true, const std::string variable="DefaultVar") | |
Specialised constructor for trace expansions. More... | |
virtual | ~ExpList1D () |
Destructor. More... | |
void | PostProcess (LibUtilities::KernelSharedPtr kernel, Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray, NekDouble h, int elmId=0) |
Performs the post-processing on a specified element. More... | |
void | PeriodicEval (Array< OneD, NekDouble > &inarray1, Array< OneD, NekDouble > &inarray2, NekDouble h, int nmodes, Array< OneD, NekDouble > &outarray) |
Evaluates the global spectral/hp expansion at some arbitray set of points. More... | |
void | ParNormalSign (Array< OneD, NekDouble > &normsign) |
Set up the normals on each expansion. More... | |
Public Member Functions inherited from Nektar::MultiRegions::ExpList | |
ExpList () | |
The default constructor. More... | |
ExpList (const LibUtilities::SessionReaderSharedPtr &pSession) | |
The default constructor. More... | |
ExpList (const LibUtilities::SessionReaderSharedPtr &pSession, const SpatialDomains::MeshGraphSharedPtr &pGraph) | |
The default constructor. More... | |
ExpList (const ExpList &in, const std::vector< unsigned int > &eIDs, const bool DeclareCoeffPhysArrays=true) | |
Constructor copying only elements defined in eIds. More... | |
ExpList (const ExpList &in, const bool DeclareCoeffPhysArrays=true) | |
The copy constructor. More... | |
virtual | ~ExpList () |
The default destructor. More... | |
int | GetNcoeffs (void) const |
Returns the total number of local degrees of freedom . More... | |
int | GetNcoeffs (const int eid) const |
Returns the total number of local degrees of freedom for element eid. More... | |
ExpansionType | GetExpType (void) |
Returns the type of the expansion. More... | |
void | SetExpType (ExpansionType Type) |
Returns the type of the expansion. More... | |
int | EvalBasisNumModesMax (void) const |
Evaulates the maximum number of modes in the elemental basis order over all elements. More... | |
const Array< OneD, int > | EvalBasisNumModesMaxPerExp (void) const |
Returns the vector of the number of modes in the elemental basis order over all elements. More... | |
int | GetTotPoints (void) const |
Returns the total number of quadrature points m_npoints . More... | |
int | GetTotPoints (const int eid) const |
Returns the total number of quadrature points for eid's element . More... | |
int | GetNpoints (void) const |
Returns the total number of quadrature points m_npoints . More... | |
int | Get1DScaledTotPoints (const NekDouble scale) const |
Returns the total number of qudature points scaled by the factor scale on each 1D direction. More... | |
void | SetWaveSpace (const bool wavespace) |
Sets the wave space to the one of the possible configuration true or false. More... | |
void | SetModifiedBasis (const bool modbasis) |
Set Modified Basis for the stability analysis. More... | |
void | SetPhys (int i, NekDouble val) |
Set the i th value of m_phys to value val. More... | |
bool | GetWaveSpace (void) const |
This function returns the third direction expansion condition, which can be in wave space (coefficient) or not It is stored in the variable m_WaveSpace. More... | |
void | SetPhys (const Array< OneD, const NekDouble > &inarray) |
Fills the array m_phys. More... | |
void | SetPhysArray (Array< OneD, NekDouble > &inarray) |
Sets the array m_phys. More... | |
void | SetPhysState (const bool physState) |
This function manually sets whether the array of physical values (implemented as m_phys) is filled or not. More... | |
bool | GetPhysState (void) const |
This function indicates whether the array of physical values (implemented as m_phys) is filled or not. More... | |
NekDouble | PhysIntegral (void) |
This function integrates a function over the domain consisting of all the elements of the expansion. More... | |
NekDouble | PhysIntegral (const Array< OneD, const NekDouble > &inarray) |
This function integrates a function over the domain consisting of all the elements of the expansion. More... | |
void | IProductWRTBase_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function calculates the inner product of a function with respect to all {local} expansion modes . More... | |
void | IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | IProductWRTDerivBase (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function calculates the inner product of a function with respect to the derivative (in direction. More... | |
void | IProductWRTDerivBase (const Array< OneD, const Array< OneD, NekDouble > > &inarray, Array< OneD, NekDouble > &outarray) |
This function calculates the inner product of a function with respect to the derivative (in direction. More... | |
void | FwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally evaluates the forward transformation of a function onto the global spectral/hp expansion. More... | |
void | FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | MultiplyByElmtInvMass (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally mulplies the coefficient space of Sin my the elemental inverse of the mass matrix. More... | |
void | MultiplyByInvMassMatrix (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | SmoothField (Array< OneD, NekDouble > &field) |
Smooth a field across elements. More... | |
void | HelmSolve (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const FlagList &flags, const StdRegions::ConstFactorMap &factors, const StdRegions::VarCoeffMap &varcoeff=StdRegions::NullVarCoeffMap, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve helmholtz problem. More... | |
void | LinearAdvectionDiffusionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve Advection Diffusion Reaction. More... | |
void | LinearAdvectionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
Solve Advection Diffusion Reaction. More... | |
void | FwdTrans_BndConstrained (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | BwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function elementally evaluates the backward transformation of the global spectral/hp element expansion. More... | |
void | BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | GetCoords (Array< OneD, NekDouble > &coord_0, Array< OneD, NekDouble > &coord_1=NullNekDouble1DArray, Array< OneD, NekDouble > &coord_2=NullNekDouble1DArray) |
This function calculates the coordinates of all the elemental quadrature points . More... | |
void | HomogeneousFwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
void | HomogeneousBwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
void | DealiasedProd (const Array< OneD, NekDouble > &inarray1, const Array< OneD, NekDouble > &inarray2, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
void | GetBCValues (Array< OneD, NekDouble > &BndVals, const Array< OneD, NekDouble > &TotField, int BndID) |
void | NormVectorIProductWRTBase (Array< OneD, const NekDouble > &V1, Array< OneD, const NekDouble > &V2, Array< OneD, NekDouble > &outarray, int BndID) |
void | NormVectorIProductWRTBase (Array< OneD, Array< OneD, NekDouble > > &V, Array< OneD, NekDouble > &outarray) |
void | ApplyGeomInfo () |
Apply geometry information to each expansion. More... | |
void | Reset () |
Reset geometry information and reset matrices. More... | |
void | WriteTecplotHeader (std::ostream &outfile, std::string var="") |
void | WriteTecplotZone (std::ostream &outfile, int expansion=-1) |
void | WriteTecplotField (std::ostream &outfile, int expansion=-1) |
void | WriteTecplotConnectivity (std::ostream &outfile, int expansion=-1) |
void | WriteVtkHeader (std::ostream &outfile) |
void | WriteVtkFooter (std::ostream &outfile) |
void | WriteVtkPieceHeader (std::ostream &outfile, int expansion, int istrip=0) |
void | WriteVtkPieceFooter (std::ostream &outfile, int expansion) |
void | WriteVtkPieceData (std::ostream &outfile, int expansion, std::string var="v") |
int | GetCoordim (int eid) |
This function returns the dimension of the coordinates of the element eid. More... | |
void | SetCoeff (int i, NekDouble val) |
Set the i th coefficiient in m_coeffs to value val. More... | |
void | SetCoeffs (int i, NekDouble val) |
Set the i th coefficiient in m_coeffs to value val. More... | |
void | SetCoeffsArray (Array< OneD, NekDouble > &inarray) |
Set the m_coeffs array to inarray. More... | |
const Array< OneD, const NekDouble > & | GetCoeffs () const |
This function returns (a reference to) the array (implemented as m_coeffs) containing all local expansion coefficients. More... | |
void | ImposeDirichletConditions (Array< OneD, NekDouble > &outarray) |
Impose Dirichlet Boundary Conditions onto Array. More... | |
void | FillBndCondFromField (void) |
Fill Bnd Condition expansion from the values stored in expansion. More... | |
void | LocalToGlobal (void) |
Put the coefficients into global ordering using m_coeffs. More... | |
void | GlobalToLocal (void) |
Put the coefficients into local ordering and place in m_coeffs. More... | |
NekDouble | GetCoeff (int i) |
Get the i th value (coefficient) of m_coeffs. More... | |
NekDouble | GetCoeffs (int i) |
Get the i th value (coefficient) of m_coeffs. More... | |
const Array< OneD, const NekDouble > & | GetPhys () const |
This function returns (a reference to) the array (implemented as m_phys) containing the function evaluated at the quadrature points. More... | |
NekDouble | Linf (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
This function calculates the error of the global spectral/hp element approximation. More... | |
NekDouble | L2 (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
This function calculates the error with respect to soln of the global spectral/hp element approximation. More... | |
NekDouble | H1 (const Array< OneD, const NekDouble > &inarray, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
Calculates the error of the global spectral/hp element approximation. More... | |
NekDouble | Integral (const Array< OneD, const NekDouble > &inarray) |
Array< OneD, const NekDouble > | HomogeneousEnergy (void) |
This function calculates the energy associated with each one of the modesof a 3D homogeneous nD expansion. More... | |
void | SetHomo1DSpecVanVisc (Array< OneD, NekDouble > visc) |
This function sets the Spectral Vanishing Viscosity in homogeneous1D expansion. More... | |
Array< OneD, const unsigned int > | GetZIDs (void) |
This function returns a vector containing the wave numbers in z-direction associated with the 3D homogenous expansion. Required if a parellelisation is applied in the Fourier direction. More... | |
LibUtilities::TranspositionSharedPtr | GetTransposition (void) |
This function returns the transposition class associaed with the homogeneous expansion. More... | |
NekDouble | GetHomoLen (void) |
This function returns the Width of homogeneous direction associaed with the homogeneous expansion. More... | |
Array< OneD, const unsigned int > | GetYIDs (void) |
This function returns a vector containing the wave numbers in y-direction associated with the 3D homogenous expansion. Required if a parellelisation is applied in the Fourier direction. More... | |
void | PhysInterp1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function interpolates the physical space points in inarray to outarray using the same points defined in the expansion but where the number of points are rescaled by 1DScale. More... | |
void | PhysGalerkinProjection1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
This function Galerkin projects the physical space points in inarray to outarray where inarray is assumed to be defined in the expansion but where the number of points are rescaled by 1DScale. More... | |
int | GetExpSize (void) |
This function returns the number of elements in the expansion. More... | |
int | GetNumElmts (void) |
This function returns the number of elements in the expansion which may be different for a homogeoenous extended expansionp. More... | |
const boost::shared_ptr < LocalRegions::ExpansionVector > | GetExp () const |
This function returns the vector of elements in the expansion. More... | |
LocalRegions::ExpansionSharedPtr & | GetExp (int n) const |
This function returns (a shared pointer to) the local elemental expansion of the element. More... | |
LocalRegions::ExpansionSharedPtr & | GetExp (const Array< OneD, const NekDouble > &gloCoord) |
This function returns (a shared pointer to) the local elemental expansion containing the arbitrary point given by gloCoord. More... | |
int | GetExpIndex (const Array< OneD, const NekDouble > &gloCoord, NekDouble tol=0.0, bool returnNearestElmt=false) |
int | GetExpIndex (const Array< OneD, const NekDouble > &gloCoords, Array< OneD, NekDouble > &locCoords, NekDouble tol=0.0, bool returnNearestElmt=false) |
int | GetCoeff_Offset (int n) const |
Get the start offset position for a global list of m_coeffs correspoinding to element n. More... | |
int | GetPhys_Offset (int n) const |
Get the start offset position for a global list of m_phys correspoinding to element n. More... | |
int | GetOffset_Elmt_Id (int n) const |
Get the element id associated with the n th consecutive block of data in m_phys and m_coeffs. More... | |
Array< OneD, NekDouble > & | UpdateCoeffs () |
This function returns (a reference to) the array (implemented as m_coeffs) containing all local expansion coefficients. More... | |
Array< OneD, NekDouble > & | UpdatePhys () |
This function returns (a reference to) the array (implemented as m_phys) containing the function evaluated at the quadrature points. More... | |
void | PhysDeriv (Direction edir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
void | PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1=NullNekDouble1DArray, Array< OneD, NekDouble > &out_d2=NullNekDouble1DArray) |
This function discretely evaluates the derivative of a function on the domain consisting of all elements of the expansion. More... | |
void | PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
const Array< OneD, const boost::shared_ptr< ExpList > > & | GetBndCondExpansions () |
boost::shared_ptr< ExpList > & | UpdateBndCondExpansion (int i) |
void | Upwind (const Array< OneD, const Array< OneD, NekDouble > > &Vec, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
void | Upwind (const Array< OneD, const NekDouble > &Vn, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
boost::shared_ptr< ExpList > & | GetTrace () |
boost::shared_ptr < AssemblyMapDG > & | GetTraceMap (void) |
const Array< OneD, const int > & | GetTraceBndMap (void) |
void | GetNormals (Array< OneD, Array< OneD, NekDouble > > &normals) |
void | AddTraceIntegral (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
void | AddTraceIntegral (const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
void | AddFwdBwdTraceIntegral (const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &outarray) |
void | GetFwdBwdTracePhys (Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
void | GetFwdBwdTracePhys (const Array< OneD, const NekDouble > &field, Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
const vector< bool > & | GetLeftAdjacentFaces (void) const |
void | ExtractTracePhys (Array< OneD, NekDouble > &outarray) |
void | ExtractTracePhys (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
const Array< OneD, const SpatialDomains::BoundaryConditionShPtr > & | GetBndConditions () |
Array< OneD, SpatialDomains::BoundaryConditionShPtr > & | UpdateBndConditions () |
void | EvaluateBoundaryConditions (const NekDouble time=0.0, const std::string varName="", const NekDouble=NekConstants::kNekUnsetDouble, const NekDouble=NekConstants::kNekUnsetDouble) |
void | GeneralMatrixOp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
This function calculates the result of the multiplication of a matrix of type specified by mkey with a vector given by inarray. More... | |
void | GeneralMatrixOp_IterPerExp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
void | SetUpPhysNormals () |
void | GetBoundaryToElmtMap (Array< OneD, int > &ElmtID, Array< OneD, int > &EdgeID) |
void | GetBndElmtExpansion (int i, boost::shared_ptr< ExpList > &result) |
void | ExtractElmtToBndPhys (int i, Array< OneD, NekDouble > &elmt, Array< OneD, NekDouble > &boundary) |
void | ExtractPhysToBndElmt (int i, const Array< OneD, const NekDouble > &phys, Array< OneD, NekDouble > &bndElmt) |
void | GetBoundaryNormals (int i, Array< OneD, Array< OneD, NekDouble > > &normals) |
void | GeneralGetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef, int NumHomoDir=0, Array< OneD, LibUtilities::BasisSharedPtr > &HomoBasis=LibUtilities::NullBasisSharedPtr1DArray, std::vector< NekDouble > &HomoLen=LibUtilities::NullNekDoubleVector, bool homoStrips=false, std::vector< unsigned int > &HomoSIDs=LibUtilities::NullUnsignedIntVector, std::vector< unsigned int > &HomoZIDs=LibUtilities::NullUnsignedIntVector, std::vector< unsigned int > &HomoYIDs=LibUtilities::NullUnsignedIntVector) |
const NekOptimize::GlobalOptParamSharedPtr & | GetGlobalOptParam (void) |
map< int, RobinBCInfoSharedPtr > | GetRobinBCInfo () |
void | GetPeriodicEntities (PeriodicMap &periodicVerts, PeriodicMap &periodicEdges, PeriodicMap &periodicFaces=NullPeriodicMap) |
std::vector < LibUtilities::FieldDefinitionsSharedPtr > | GetFieldDefinitions () |
void | GetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef) |
void | AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata) |
Append the element data listed in elements fielddef->m_ElementIDs onto fielddata. More... | |
void | AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, Array< OneD, NekDouble > &coeffs) |
Append the data in coeffs listed in elements fielddef->m_ElementIDs onto fielddata. More... | |
void | ExtractElmtDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract the data in fielddata into the coeffs using the basic ExpList Elemental expansions rather than planes in homogeneous case. More... | |
void | ExtractCoeffsToCoeffs (const boost::shared_ptr< ExpList > &fromExpList, const Array< OneD, const NekDouble > &fromCoeffs, Array< OneD, NekDouble > &toCoeffs) |
Extract the data from fromField using fromExpList the coeffs using the basic ExpList Elemental expansions rather than planes in homogeneous case. More... | |
void | ExtractDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract the data in fielddata into the coeffs. More... | |
boost::shared_ptr< ExpList > | GetSharedThisPtr () |
Returns a shared pointer to the current object. More... | |
boost::shared_ptr < LibUtilities::SessionReader > | GetSession () |
Returns the session object. More... | |
boost::shared_ptr < LibUtilities::Comm > | GetComm () |
Returns the comm object. More... | |
SpatialDomains::MeshGraphSharedPtr | GetGraph () |
LibUtilities::BasisSharedPtr | GetHomogeneousBasis (void) |
boost::shared_ptr< ExpList > & | GetPlane (int n) |
void | CreateCollections (Collections::ImplementationType ImpType=Collections::eNoImpType) |
Construct collections of elements containing a single element type and polynomial order from the list of expansions. More... | |
void | ClearGlobalLinSysManager (void) |
Protected Member Functions | |
void | v_Upwind (const Array< OneD, const Array< OneD, NekDouble > > &Vec, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
Upwind the Fwd and Bwd states based on the velocity field given by Vec. More... | |
void | v_Upwind (const Array< OneD, const NekDouble > &Vn, const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &Upwind) |
Upwind the Fwd and Bwd states based on the one- dimensional normal velocity field given by Vn. More... | |
void | v_GetNormals (Array< OneD, Array< OneD, NekDouble > > &normals) |
Populate normals with the normals of all expansions. More... | |
Protected Member Functions inherited from Nektar::MultiRegions::ExpList | |
boost::shared_ptr< DNekMat > | GenGlobalMatrixFull (const GlobalLinSysKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
const DNekScalBlkMatSharedPtr | GenBlockMatrix (const GlobalMatrixKey &gkey) |
This function assembles the block diagonal matrix of local matrices of the type mtype. More... | |
const DNekScalBlkMatSharedPtr & | GetBlockMatrix (const GlobalMatrixKey &gkey) |
void | MultiplyByBlockMatrix (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
boost::shared_ptr< GlobalMatrix > | GenGlobalMatrix (const GlobalMatrixKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
Generates a global matrix from the given key and map. More... | |
void | GlobalEigenSystem (const boost::shared_ptr< DNekMat > &Gmat, Array< OneD, NekDouble > &EigValsReal, Array< OneD, NekDouble > &EigValsImag, Array< OneD, NekDouble > &EigVecs=NullNekDouble1DArray) |
boost::shared_ptr< GlobalLinSys > | GenGlobalLinSys (const GlobalLinSysKey &mkey, const boost::shared_ptr< AssemblyMapCG > &locToGloMap) |
This operation constructs the global linear system of type mkey. More... | |
boost::shared_ptr< GlobalLinSys > | GenGlobalBndLinSys (const GlobalLinSysKey &mkey, const AssemblyMapSharedPtr &locToGloMap) |
Generate a GlobalLinSys from information provided by the key "mkey" and the mapping provided in LocToGloBaseMap. More... | |
void | ReadGlobalOptimizationParameters () |
virtual int | v_GetNumElmts (void) |
virtual const Array< OneD, const boost::shared_ptr < ExpList > > & | v_GetBndCondExpansions (void) |
virtual boost::shared_ptr < ExpList > & | v_UpdateBndCondExpansion (int i) |
virtual boost::shared_ptr < ExpList > & | v_GetTrace () |
virtual boost::shared_ptr < AssemblyMapDG > & | v_GetTraceMap () |
virtual const Array< OneD, const int > & | v_GetTraceBndMap () |
virtual void | v_AddTraceIntegral (const Array< OneD, const NekDouble > &Fx, const Array< OneD, const NekDouble > &Fy, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddTraceIntegral (const Array< OneD, const NekDouble > &Fn, Array< OneD, NekDouble > &outarray) |
virtual void | v_AddFwdBwdTraceIntegral (const Array< OneD, const NekDouble > &Fwd, const Array< OneD, const NekDouble > &Bwd, Array< OneD, NekDouble > &outarray) |
virtual void | v_GetFwdBwdTracePhys (Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
virtual void | v_GetFwdBwdTracePhys (const Array< OneD, const NekDouble > &field, Array< OneD, NekDouble > &Fwd, Array< OneD, NekDouble > &Bwd) |
virtual const vector< bool > & | v_GetLeftAdjacentFaces (void) const |
virtual void | v_ExtractTracePhys (Array< OneD, NekDouble > &outarray) |
virtual void | v_ExtractTracePhys (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_MultiplyByInvMassMatrix (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_HelmSolve (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const FlagList &flags, const StdRegions::ConstFactorMap &factors, const StdRegions::VarCoeffMap &varcoeff, const Array< OneD, const NekDouble > &dirForcing) |
virtual void | v_LinearAdvectionDiffusionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
virtual void | v_LinearAdvectionReactionSolve (const Array< OneD, Array< OneD, NekDouble > > &velocity, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, const NekDouble lambda, CoeffState coeffstate=eLocal, const Array< OneD, const NekDouble > &dirForcing=NullNekDouble1DArray) |
virtual void | v_ImposeDirichletConditions (Array< OneD, NekDouble > &outarray) |
virtual void | v_FillBndCondFromField () |
virtual void | v_Reset () |
Reset geometry information, metrics, matrix managers and geometry information. More... | |
virtual void | v_LocalToGlobal (void) |
virtual void | v_GlobalToLocal (void) |
virtual void | v_BwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_BwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_FwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_FwdTrans_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_SmoothField (Array< OneD, NekDouble > &field) |
virtual void | v_IProductWRTBase (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_IProductWRTBase_IterPerExp (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_GeneralMatrixOp (const GlobalMatrixKey &gkey, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate) |
virtual void | v_GetCoords (Array< OneD, NekDouble > &coord_0, Array< OneD, NekDouble > &coord_1, Array< OneD, NekDouble > &coord_2=NullNekDouble1DArray) |
virtual void | v_PhysDeriv (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d0, Array< OneD, NekDouble > &out_d1, Array< OneD, NekDouble > &out_d2) |
virtual void | v_PhysDeriv (const int dir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
virtual void | v_PhysDeriv (Direction edir, const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &out_d) |
virtual void | v_HomogeneousFwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
virtual void | v_HomogeneousBwdTrans (const Array< OneD, const NekDouble > &inarray, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal, bool Shuff=true, bool UnShuff=true) |
virtual void | v_DealiasedProd (const Array< OneD, NekDouble > &inarray1, const Array< OneD, NekDouble > &inarray2, Array< OneD, NekDouble > &outarray, CoeffState coeffstate=eLocal) |
virtual void | v_GetBCValues (Array< OneD, NekDouble > &BndVals, const Array< OneD, NekDouble > &TotField, int BndID) |
virtual void | v_NormVectorIProductWRTBase (Array< OneD, const NekDouble > &V1, Array< OneD, const NekDouble > &V2, Array< OneD, NekDouble > &outarray, int BndID) |
virtual void | v_NormVectorIProductWRTBase (Array< OneD, Array< OneD, NekDouble > > &V, Array< OneD, NekDouble > &outarray) |
virtual void | v_GetBoundaryToElmtMap (Array< OneD, int > &ElmtID, Array< OneD, int > &EdgeID) |
virtual void | v_GetBndElmtExpansion (int i, boost::shared_ptr< ExpList > &result) |
virtual void | v_ExtractElmtToBndPhys (int i, Array< OneD, NekDouble > &elmt, Array< OneD, NekDouble > &boundary) |
virtual void | v_ExtractPhysToBndElmt (int i, const Array< OneD, const NekDouble > &phys, Array< OneD, NekDouble > &bndElmt) |
virtual void | v_GetBoundaryNormals (int i, Array< OneD, Array< OneD, NekDouble > > &normals) |
virtual std::vector < LibUtilities::FieldDefinitionsSharedPtr > | v_GetFieldDefinitions (void) |
virtual void | v_GetFieldDefinitions (std::vector< LibUtilities::FieldDefinitionsSharedPtr > &fielddef) |
virtual void | v_AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata) |
virtual void | v_AppendFieldData (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, Array< OneD, NekDouble > &coeffs) |
virtual void | v_ExtractDataToCoeffs (LibUtilities::FieldDefinitionsSharedPtr &fielddef, std::vector< NekDouble > &fielddata, std::string &field, Array< OneD, NekDouble > &coeffs) |
Extract data from raw field data into expansion list. More... | |
virtual void | v_ExtractCoeffsToCoeffs (const boost::shared_ptr< ExpList > &fromExpList, const Array< OneD, const NekDouble > &fromCoeffs, Array< OneD, NekDouble > &toCoeffs) |
virtual void | v_WriteTecplotHeader (std::ostream &outfile, std::string var="") |
virtual void | v_WriteTecplotZone (std::ostream &outfile, int expansion) |
virtual void | v_WriteTecplotField (std::ostream &outfile, int expansion) |
virtual void | v_WriteTecplotConnectivity (std::ostream &outfile, int expansion) |
virtual void | v_WriteVtkPieceData (std::ostream &outfile, int expansion, std::string var) |
virtual NekDouble | v_L2 (const Array< OneD, const NekDouble > &phys, const Array< OneD, const NekDouble > &soln=NullNekDouble1DArray) |
virtual NekDouble | v_Integral (const Array< OneD, const NekDouble > &inarray) |
virtual Array< OneD, const NekDouble > | v_HomogeneousEnergy (void) |
virtual LibUtilities::TranspositionSharedPtr | v_GetTransposition (void) |
virtual NekDouble | v_GetHomoLen (void) |
virtual Array< OneD, const unsigned int > | v_GetZIDs (void) |
virtual Array< OneD, const unsigned int > | v_GetYIDs (void) |
virtual void | v_PhysInterp1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_PhysGalerkinProjection1DScaled (const NekDouble scale, const Array< OneD, NekDouble > &inarray, Array< OneD, NekDouble > &outarray) |
virtual void | v_ClearGlobalLinSysManager (void) |
void | ExtractFileBCs (const std::string &fileName, const std::string &varName, const boost::shared_ptr< ExpList > locExpList) |
Private Member Functions | |
void | SetCoeffPhysOffsets (void) |
Definition of the total number of degrees of freedom and quadrature points. Sets up the storage for m_coeff and m_phys. More... | |
virtual void | v_ReadGlobalOptimizationParameters () |
virtual void | v_SetUpPhysNormals () |
Set up the normals on each expansion. More... | |
virtual void | v_WriteVtkPieceHeader (std::ostream &outfile, int expansion, int istrip) |
const StdRegions::StdExpansionVector &locexp); More... | |
Private Attributes | |
int | m_firstIntEl |
Array< OneD, NekDouble > | m_normSign |
Additional Inherited Members | |
Public Attributes inherited from Nektar::MultiRegions::ExpList | |
ExpansionType | m_expType |
Static Protected Member Functions inherited from Nektar::MultiRegions::ExpList | |
static SpatialDomains::BoundaryConditionShPtr | GetBoundaryCondition (const SpatialDomains::BoundaryConditionCollection &collection, unsigned int index, const std::string &variable) |
Protected Attributes inherited from Nektar::MultiRegions::ExpList | |
LibUtilities::CommSharedPtr | m_comm |
Communicator. More... | |
LibUtilities::SessionReaderSharedPtr | m_session |
Session. More... | |
SpatialDomains::MeshGraphSharedPtr | m_graph |
Mesh associated with this expansion list. More... | |
int | m_ncoeffs |
The total number of local degrees of freedom. m_ncoeffs . More... | |
int | m_npoints |
Array< OneD, NekDouble > | m_coeffs |
Concatenation of all local expansion coefficients. More... | |
Array< OneD, NekDouble > | m_phys |
The global expansion evaluated at the quadrature points. More... | |
bool | m_physState |
The state of the array m_phys. More... | |
boost::shared_ptr < LocalRegions::ExpansionVector > | m_exp |
The list of local expansions. More... | |
Collections::CollectionVector | m_collections |
std::vector< int > | m_coll_coeff_offset |
Offset of elemental data into the array m_coeffs. More... | |
std::vector< int > | m_coll_phys_offset |
Offset of elemental data into the array m_phys. More... | |
Array< OneD, int > | m_coeff_offset |
Offset of elemental data into the array m_coeffs. More... | |
Array< OneD, int > | m_phys_offset |
Offset of elemental data into the array m_phys. More... | |
Array< OneD, int > | m_offset_elmt_id |
Array containing the element id m_offset_elmt_id[n] that the n^th consecutive block of data in m_coeffs and m_phys is associated, i.e. for an array of constant expansion size and single shape elements m_phys[n*m_npoints] is the data related to m_exp[m_offset_elmt_id[n]];. More... | |
NekOptimize::GlobalOptParamSharedPtr | m_globalOptParam |
BlockMatrixMapShPtr | m_blockMat |
bool | m_WaveSpace |
This class is the abstraction of a one-dimensional multi-elemental expansions which is merely a collection of local expansions.
This multi-elemental expansion, which does not exhibit any coupling between the expansion on the separate elements, can be formulated as,
where is the number of elements and is the local elemental number of expansion modes.
Instances of this class may be optionally constructed which use generalised segment expansions (LocalRegions::GenSegExp), rather than the standard segment expansions (LocalRegions::SegExp). LocalRegions::GenSegExp provides additional spatial data including segment normals and is enabled using the UseGenSegExp flag.
This class inherits all its variables and member functions from the base class MultiRegions::ExpList.
Definition at line 61 of file ExpList1D.h.
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | ) |
The default constructor.
Assumes use of standard segment expansions only. All data storage areas are initialised to empty arrays by the default ExpList constructor.
Definition at line 75 of file ExpList1D.cpp.
References Nektar::MultiRegions::e1D, and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const ExpList1D & | In, |
const bool | DeclareCoeffPhysArrays = true |
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) |
The copy constructor.
Creates an identical copy of another ExpList1D object.
Definition at line 85 of file ExpList1D.cpp.
References Nektar::MultiRegions::e1D, and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const ExpList1D & | In, |
const std::vector< unsigned int > & | eIDs, | ||
const bool | DeclareCoeffPhysArrays = true |
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) |
Constructor copying only elements defined in eIds.
Definition at line 94 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::e1D, Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::ReadGlobalOptimizationParameters(), SetCoeffPhysOffsets(), and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const LibUtilities::BasisKey & | Ba, | ||
const SpatialDomains::MeshGraphSharedPtr & | graph1D | ||
) |
Construct an ExpList1D from a given graph.
After initialising the data inherited through MultiRegions::ExpList, populate the expansion list from the segments defined in the supplied SpatialDomains::MeshGraph1D. All expansions in the graph are defined using the same LibUtilities::BasisKey which overrides that specified in graph1D.
Ba | BasisKey describing quadrature points and number of modes. |
graph1D | Domain and expansion definitions. |
Definition at line 129 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::e1D, Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_coeffs, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_phys, Nektar::MultiRegions::ExpList::ReadGlobalOptimizationParameters(), SetCoeffPhysOffsets(), and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const SpatialDomains::MeshGraphSharedPtr & | graph1D, | ||
const bool | DeclareCoeffPhysArrays = true |
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) |
This constructor sets up a list of local expansions based on an input graph1D.
Given a mesh graph1D, containing information about the domain and the spectral/hp element expansion, this constructor fills the list of local expansions {m_exp} with the proper expansions, calculates the total number of quadrature points and local expansion coefficients and allocates memory for the arrays m_coeffs and m_phys.
For each element its corresponding LibUtilities::BasisKey is retrieved and this is used to construct either a standard segment (LocalRegions::SegExp) or a generalised segment (LocalRegions::GenSegExp) which is stored in the list m_exp. Finally, ExpList::SetCoeffPhys is called to initialise the data storage areas and set up the offset arrays.
graph1D | A mesh, containing information about the domain and the spectral/hp element expansion. |
UseGenSegExp | If true, create general segment expansions instead of just normal segment expansions. |
Definition at line 199 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::e1D, Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_coeffs, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_phys, Nektar::MultiRegions::ExpList::ReadGlobalOptimizationParameters(), SetCoeffPhysOffsets(), and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const SpatialDomains::MeshGraphSharedPtr & | graph1D, | ||
const SpatialDomains::CompositeMap & | domain, | ||
const bool | DeclareCoeffPhysArrays = true , |
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const std::string | var = "DefaultVar" , |
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bool | SetToOneSpaceDimension = false |
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) |
This constructor sets up a list of local expansions based on an input compositeMap.
Given a mesh graph1D, and the spectral/hp element expansion as well as and separate information about a domain, this constructor fills the list of local expansions {m_exp} with the proper expansions, calculates the total number of quadrature points and local expansion coefficients and allocates memory for the arrays m_coeffs and m_phys.
For each element its corresponding LibUtilities::BasisKey is retrieved and this is used to construct either a standard segment (LocalRegions::SegExp) or a generalised segment (LocalRegions::GenSegExp) which is stored in the list m_exp. Finally, ExpList::SetCoeffPhys is called to initialise the data storage areas and set up the offset arrays.
graph1D | A mesh, containing information about the domain and the spectral/hp element expansion. |
UseGenSegExp | If true, create general segment expansions instead of just normal segment expansions. |
Definition at line 282 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_coeffs, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_phys, Nektar::MultiRegions::ExpList::ReadGlobalOptimizationParameters(), and SetCoeffPhysOffsets().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const SpatialDomains::CompositeMap & | domain, | ||
const SpatialDomains::MeshGraphSharedPtr & | graph2D, | ||
const bool | DeclareCoeffPhysArrays = true , |
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const std::string | variable = "DefaultVar" |
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) |
Specialised constructor for Neumann boundary conditions in DisContField2D and ContField2D.
Fills the list of local expansions with the segments from the 2D mesh specified by domain. This CompositeMap contains a list of Composites which define the Neumann boundary.
domain | A domain, comprising of one or more composite regions, |
graph2D | A mesh, containing information about the domain and the spectral/hp element expansion. |
UseGenSegExp | If true, create general segment expansions instead of just normal segment expansions. |
Definition at line 386 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::e1D, Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::MultiRegions::ExpList::m_coeffs, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::m_graph, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_phys, SetCoeffPhysOffsets(), and Nektar::MultiRegions::ExpList::SetExpType().
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const SpatialDomains::CompositeMap & | domain, | ||
const SpatialDomains::MeshGraphSharedPtr & | graph1D, | ||
int | i, | ||
const bool | DeclareCoeffPhysArrays = true |
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) |
Nektar::MultiRegions::ExpList1D::ExpList1D | ( | const LibUtilities::SessionReaderSharedPtr & | pSession, |
const Array< OneD, const ExpListSharedPtr > & | bndConstraint, | ||
const Array< OneD, const SpatialDomains::BoundaryConditionShPtr > & | bndCond, | ||
const LocalRegions::ExpansionVector & | locexp, | ||
const SpatialDomains::MeshGraphSharedPtr & | graph2D, | ||
const PeriodicMap & | periodicEdges, | ||
const bool | DeclareCoeffPhysArrays = true , |
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const std::string | variable = "DefaultVar" |
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) |
Specialised constructor for trace expansions.
Store expansions for the trace space expansions used in DisContField2D.
bndConstraint | Array of ExpList1D objects each containing a 1D spectral/hp element expansion on a single boundary region. |
bndCond | Array of BoundaryCondition objects which contain information about the boundary conditions on the different boundary regions. |
locexp | Complete domain expansion list. |
graph2D | 2D mesh corresponding to the expansion list. |
periodicEdges | List of periodic edges. |
UseGenSegExp | If true, create general segment expansions instead of just normal segment expansions. |
Definition at line 467 of file ExpList1D.cpp.
References Nektar::MemoryManager< DataType >::AllocateSharedPtr(), ASSERTL0, Nektar::MultiRegions::ExpList::CreateCollections(), Nektar::MultiRegions::e1D, Nektar::SpatialDomains::eDirichlet, Nektar::LibUtilities::BasisKey::GetBasisType(), Nektar::MultiRegions::ExpList::GetExpSize(), Nektar::LocalRegions::Expansion2D::GetGeom2D(), Nektar::StdRegions::StdExpansion::GetNedges(), Nektar::LibUtilities::BasisKey::GetNumModes(), Nektar::LibUtilities::BasisKey::GetNumPoints(), Nektar::LibUtilities::BasisKey::GetPointsType(), Nektar::iterator, Nektar::MultiRegions::ExpList::m_coeffs, Nektar::MultiRegions::ExpList::m_globalOptParam, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_phys, Nektar::LibUtilities::ReduceSum, SetCoeffPhysOffsets(), Nektar::MultiRegions::ExpList::SetExpType(), and Vmath::Vsum().
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virtual |
Set up the normals on each expansion.
void Nektar::MultiRegions::ExpList1D::PeriodicEval | ( | Array< OneD, NekDouble > & | inarray1, |
Array< OneD, NekDouble > & | inarray2, | ||
NekDouble | h, | ||
int | nmodes, | ||
Array< OneD, NekDouble > & | outarray | ||
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Evaluates the global spectral/hp expansion at some arbitray set of points.
Given the elemental coefficients of an expansion, periodically evaluate the spectral/hp expansion at arbitrary points.
inarray1 | An array of size containing the local coefficients . |
inarray2 | Contains the set of evaluation points. |
h | The mesh spacing. |
nmodes | The number of polynomial modes for each element (we consider that each element has the same number of polynomial modes). |
outarray | Contains the resulting values at the evaluation points |
Definition at line 844 of file ExpList1D.cpp.
References Nektar::MultiRegions::ExpList::GetExpSize(), and Polylib::jacobfd().
Referenced by PostProcess().
void Nektar::MultiRegions::ExpList1D::PostProcess | ( | LibUtilities::KernelSharedPtr | kernel, |
Array< OneD, NekDouble > & | inarray, | ||
Array< OneD, NekDouble > & | outarray, | ||
NekDouble | h, | ||
int | elmId = 0 |
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) |
Performs the post-processing on a specified element.
To perform post-processing on the entire domain use elmtId = 0.
kernel | The post-processing kernel. |
inarray | The set of evaluation points. |
outarray | Contains the resulting post-processed solution for element elmId. |
h | The mesh spacing. |
elmId | Optionally specifies which element to perform the post-processing on (0=whole domain). |
Definition at line 745 of file ExpList1D.cpp.
References Nektar::MultiRegions::ExpList::GetCoeffs(), Nektar::MultiRegions::ExpList::GetExp(), PeriodicEval(), and Nektar::LibUtilities::PointsManager().
Definition of the total number of degrees of freedom and quadrature points. Sets up the storage for m_coeff and m_phys.
Each expansion (local element) is processed in turn to determine the number of coefficients and physical data points it contributes to the domain. Three arrays, m_coeff_offset, m_phys_offset and m_offset_elmt_id, are also initialised and updated to store the data offsets of each element in the m_coeffs and m_phys arrays, and the element id that each consecutive block is associated respectively.
Definition at line 707 of file ExpList1D.cpp.
References Nektar::MultiRegions::ExpList::m_coeff_offset, Nektar::MultiRegions::ExpList::m_exp, Nektar::MultiRegions::ExpList::m_ncoeffs, Nektar::MultiRegions::ExpList::m_npoints, Nektar::MultiRegions::ExpList::m_offset_elmt_id, and Nektar::MultiRegions::ExpList::m_phys_offset.
Referenced by ExpList1D().
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protectedvirtual |
Populate normals with the normals of all expansions.
For each local element, copy the normals stored in the element list into the array normals.
normals | Multidimensional array in which to copy normals to. Must have dimension equal to or larger than the spatial dimension of the elements. |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 1072 of file ExpList1D.cpp.
References ASSERTL1, Nektar::MultiRegions::ExpList::GetCoordim(), Nektar::LocalRegions::Expansion1D::GetLeftAdjacentElementExp(), Nektar::LibUtilities::Interp1D(), Nektar::MultiRegions::ExpList::m_exp, and Nektar::MultiRegions::ExpList::m_phys_offset.
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privatevirtual |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 1182 of file ExpList1D.cpp.
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privatevirtual |
Set up the normals on each expansion.
Sets up the normals on all edges of expansions in the domain.
locexp | Complete list of domain expansions. |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 947 of file ExpList1D.cpp.
References Nektar::MultiRegions::ExpList::m_exp.
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protectedvirtual |
Upwind the Fwd and Bwd states based on the velocity field given by Vec.
Upwind the left and right states given by the Arrays Fwd and Bwd using the vector quantity Vec and ouput the upwinded value in the array upwind.
Vec | Velocity field. |
Fwd | Left state. |
Bwd | Right state. |
Upwind | Output vector. |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 969 of file ExpList1D.cpp.
References ASSERTL1, Nektar::MultiRegions::ExpList::GetCoordim(), Nektar::MultiRegions::ExpList::m_exp, and Nektar::MultiRegions::ExpList::m_phys_offset.
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protectedvirtual |
Upwind the Fwd and Bwd states based on the one- dimensional normal velocity field given by Vn.
One-dimensional upwind.
Vn | Velocity field. |
Fwd | Left state. |
Bwd | Right state. |
Upwind | Output vector. |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 1032 of file ExpList1D.cpp.
References Nektar::MultiRegions::ExpList::m_exp, and Nektar::MultiRegions::ExpList::m_phys_offset.
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privatevirtual |
const StdRegions::StdExpansionVector &locexp);
Writes out the header for a <PIECE> VTK XML segment describing the geometric information which comprises this element. This includes vertex coordinates for each quadrature point, vertex connectivity information, cell types and cell offset data.
outfile | Output stream to write data to. |
Reimplemented from Nektar::MultiRegions::ExpList.
Definition at line 1201 of file ExpList1D.cpp.
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private |
Definition at line 190 of file ExpList1D.h.
Definition at line 192 of file ExpList1D.h.